RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 TRIM56Q9BRZ2 755 aaKnown RBP25.47■■□□□ 1.67
DDR1-279ENST00000515529 LDHAL6BQ9BYZ2 381 aaPredicted RBP25.47■■□□□ 1.67
DDR1-279ENST00000515529 MSRB2Q9Y3D2 182 aa25.47■■□□□ 1.67
DDR1-279ENST00000515529 MRFAP1Q9Y605 127 aa25.47■■□□□ 1.67
DDR1-279ENST00000515529 PRSS21Q9Y6M0 314 aa25.47■■□□□ 1.67
DDR1-279ENST00000515529 TTC4O95801 387 aa25.46■■□□□ 1.67
DDR1-279ENST00000515529 XRCC1P18887 633 aaPredicted RBP25.46■■□□□ 1.67
DDR1-279ENST00000515529 ARNTP27540 789 aa25.46■■□□□ 1.67
DDR1-279ENST00000515529 OR1D5P58170 312 aa25.46■■□□□ 1.67
DDR1-279ENST00000515529 LONRF1Q17RB8 773 aa25.46■■□□□ 1.67
DDR1-279ENST00000515529 NEPROQ6NW34 567 aa25.46■■□□□ 1.67
DDR1-279ENST00000515529 SERBP1Q8NC51 408 aaKnown RBP eCLIP25.46■■□□□ 1.67
DDR1-279ENST00000515529 GABPB2Q8TAK5 448 aaPredicted RBP25.46■■□□□ 1.67
DDR1-279ENST00000515529 AHCYL2Q96HN2 611 aaKnown RBP25.46■■□□□ 1.67
DDR1-279ENST00000515529 EBNA1BP2Q99848 306 aaKnown RBP25.46■■□□□ 1.67
DDR1-279ENST00000515529 C20orf96Q9NUD7 363 aaPredicted RBP25.46■■□□□ 1.67
DDR1-279ENST00000515529 SCHIP1Q9P0W5 487 aaPredicted RBP25.46■■□□□ 1.67
DDR1-279ENST00000515529 WHRNQ9P202 907 aa25.46■■□□□ 1.67
DDR1-279ENST00000515529 ASXL3Q9C0F0 2248 aa25.45■■□□□ 1.67
DDR1-279ENST00000515529 UBA6A0AVT1 1052 aaPredicted RBP25.45■■□□□ 1.66
DDR1-279ENST00000515529 PRMT5O14744 637 aaPredicted RBP25.45■■□□□ 1.66
DDR1-279ENST00000515529 OGNP20774 298 aaKnown RBP25.45■■□□□ 1.66
DDR1-279ENST00000515529 ARCN1P48444 511 aaKnown RBP25.45■■□□□ 1.66
DDR1-279ENST00000515529 TARDBPQ13148 414 aaKnown RBP eCLIP25.45■■□□□ 1.66
DDR1-279ENST00000515529 NR1D2Q14995 579 aa25.45■■□□□ 1.66
DDR1-279ENST00000515529 MAP9Q49MG5 647 aa25.45■■□□□ 1.66
DDR1-279ENST00000515529 SYTL3Q4VX76 610 aa25.45■■□□□ 1.66
DDR1-279ENST00000515529 CHCHD2P9Q5T1J5 151 aaPredicted RBP25.45■■□□□ 1.66
DDR1-279ENST00000515529 CDCP2Q5VXM1 449 aa25.45■■□□□ 1.66
DDR1-279ENST00000515529 PTRHD1Q6GMV3 140 aaKnown RBP25.45■■□□□ 1.66
DDR1-279ENST00000515529 CCNI2Q6ZMN8 369 aaPredicted RBP25.45■■□□□ 1.66
DDR1-279ENST00000515529 CACTIN-AS1Q8N1I8 211 aa25.45■■□□□ 1.66
DDR1-279ENST00000515529 DCBLD1Q8N8Z6 715 aa25.45■■□□□ 1.66
DDR1-279ENST00000515529 CALML6Q8TD86 181 aa25.45■■□□□ 1.66
DDR1-279ENST00000515529 ELMO1Q92556 727 aa25.45■■□□□ 1.66
DDR1-279ENST00000515529 FCRL3Q96P31 734 aaPredicted RBP25.45■■□□□ 1.66
DDR1-279ENST00000515529 TCF12Q99081 682 aa25.45■■□□□ 1.66
DDR1-279ENST00000515529 WWP1Q9H0M0 922 aa25.45■■□□□ 1.66
DDR1-279ENST00000515529 COG4Q9H9E3 785 aa25.45■■□□□ 1.66
DDR1-279ENST00000515529 POT1Q9NUX5 634 aa25.45■■□□□ 1.66
DDR1-279ENST00000515529 VPS9D1Q9Y2B5 631 aa25.45■■□□□ 1.66
DDR1-279ENST00000515529 RP1P56715 2156 aa25.44■■□□□ 1.66
DDR1-279ENST00000515529 CTAGE15A4D2H0 777 aa25.44■■□□□ 1.66
DDR1-279ENST00000515529 FAM221BA6H8Z2 402 aa25.44■■□□□ 1.66
DDR1-279ENST00000515529 OR52A4PA6NMU1 304 aa25.44■■□□□ 1.66
DDR1-279ENST00000515529 NTN3O00634 580 aaPredicted RBP25.44■■□□□ 1.66
DDR1-279ENST00000515529 CSO75390 466 aaKnown RBP25.44■■□□□ 1.66
DDR1-279ENST00000515529 BANF1O75531 89 aa25.44■■□□□ 1.66
DDR1-279ENST00000515529 CTAGE8P0CG41 777 aa25.44■■□□□ 1.66
DDR1-279ENST00000515529 BRAFP15056 766 aa25.44■■□□□ 1.66
DDR1-279ENST00000515529 SLC19A1P41440 591 aa25.44■■□□□ 1.66
DDR1-279ENST00000515529 UBE2IP63279 158 aaKnown RBP25.44■■□□□ 1.66
DDR1-279ENST00000515529 CLCA4Q14CN2 919 aa25.44■■□□□ 1.66
DDR1-279ENST00000515529 MSS51Q4VC12 460 aa25.44■■□□□ 1.66
DDR1-279ENST00000515529 CTAGE6Q86UF2 777 aa25.44■■□□□ 1.66
DDR1-279ENST00000515529 LRRC6Q86X45 466 aa25.44■■□□□ 1.66
DDR1-279ENST00000515529 ZNF761Q86XN6 746 aaPredicted RBP25.44■■□□□ 1.66
DDR1-279ENST00000515529 CTAGE4Q8IX94 777 aa25.44■■□□□ 1.66
DDR1-279ENST00000515529 RBM12BQ8IXT5 1001 aaKnown RBP25.44■■□□□ 1.66
DDR1-279ENST00000515529 AGGF1Q8N302 714 aaeCLIP25.44■■□□□ 1.66
DDR1-279ENST00000515529 GPR150Q8NGU9 434 aa25.44■■□□□ 1.66
DDR1-279ENST00000515529 OR10G6Q8NH81 332 aa25.44■■□□□ 1.66
DDR1-279ENST00000515529 LRRC39Q96DD0 335 aa25.44■■□□□ 1.66
DDR1-279ENST00000515529 IMP3Q9NV31 184 aaKnown RBP25.44■■□□□ 1.66
DDR1-279ENST00000515529 ZNF624Q9P2J8 865 aaPredicted RBP25.44■■□□□ 1.66
DDR1-279ENST00000515529 GNPTGQ9UJJ9 305 aa25.44■■□□□ 1.66
DDR1-279ENST00000515529 WDR37Q9Y2I8 494 aa25.44■■□□□ 1.66
DDR1-279ENST00000515529 BPTFQ12830 3046 aa25.43■■□□□ 1.66
DDR1-279ENST00000515529 ZCWPW2A0A1B0GU75 182 aa25.43■■□□□ 1.66
DDR1-279ENST00000515529 IFRD1O00458 451 aaPredicted RBP25.43■■□□□ 1.66
DDR1-279ENST00000515529 GPLD1P80108 840 aa25.43■■□□□ 1.66
DDR1-279ENST00000515529 KRT33BQ14525 404 aa25.43■■□□□ 1.66
DDR1-279ENST00000515529 CRYMQ14894 314 aa25.43■■□□□ 1.66
DDR1-279ENST00000515529 SPANXN3Q5MJ09 141 aa25.43■■□□□ 1.66
DDR1-279ENST00000515529 DUPD1Q68J44 220 aa25.43■■□□□ 1.66
DDR1-279ENST00000515529 ZNF470Q6ECI4 717 aa25.43■■□□□ 1.66
DDR1-279ENST00000515529 MARCH9Q86YJ5 346 aa25.43■■□□□ 1.66
DDR1-279ENST00000515529 LMNTD2Q8IXW0 634 aa25.43■■□□□ 1.66
DDR1-279ENST00000515529 C12orf66Q96MD2 445 aa25.43■■□□□ 1.66
DDR1-279ENST00000515529 FAM167BQ9BTA0 163 aa25.43■■□□□ 1.66
DDR1-279ENST00000515529 IL1RAPL1Q9NZN1 696 aa25.43■■□□□ 1.66
DDR1-279ENST00000515529 ZC3H7BQ9UGR2 993 aaKnown RBP25.43■■□□□ 1.66
DDR1-279ENST00000515529 CHMP2BQ9UQN3 213 aa25.43■■□□□ 1.66
DDR1-279ENST00000515529 FAM169AQ9Y6X4 670 aa25.43■■□□□ 1.66
DDR1-279ENST00000515529 A0A1W2PQM1 296 aa25.42■■□□□ 1.66
DDR1-279ENST00000515529 D6RAR5 112 aa25.42■■□□□ 1.66
DDR1-279ENST00000515529 LIN7AO14910 233 aaPredicted RBP25.42■■□□□ 1.66
DDR1-279ENST00000515529 B4GAT1O43505 415 aa25.42■■□□□ 1.66
DDR1-279ENST00000515529 ELK3P41970 407 aa25.42■■□□□ 1.66
DDR1-279ENST00000515529 MAPK9P45984 424 aa25.42■■□□□ 1.66
DDR1-279ENST00000515529 EIF3BP55884 814 aaKnown RBP25.42■■□□□ 1.66
DDR1-279ENST00000515529 CAV1Q03135 178 aa25.42■■□□□ 1.66
DDR1-279ENST00000515529 PDIA2Q13087 525 aaKnown RBP25.42■■□□□ 1.66
DDR1-279ENST00000515529 RPA4Q13156 261 aa25.42■■□□□ 1.66
DDR1-279ENST00000515529 BOP1Q14137 746 aaKnown RBP25.42■■□□□ 1.66
DDR1-279ENST00000515529 RPE65Q16518 533 aa25.42■■□□□ 1.66
DDR1-279ENST00000515529 TYSND1Q2T9J0 566 aa25.42■■□□□ 1.66
DDR1-279ENST00000515529 HP1BP3Q5SSJ5 553 aaPredicted RBP25.42■■□□□ 1.66
DDR1-279ENST00000515529 PIM3Q86V86 326 aa25.42■■□□□ 1.66
DDR1-279ENST00000515529 CFAP36Q96G28 342 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms