RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 CES3Q6UWW8 571 aa11.26□□□□□ -0.61
VCAN-212ENST00000515397 FAM92BQ6ZTR7 304 aa11.26□□□□□ -0.61
VCAN-212ENST00000515397 LINC00523Q86TU6 105 aa11.26□□□□□ -0.61
VCAN-212ENST00000515397 LDB1Q86U70 411 aaPredicted RBP11.26□□□□□ -0.61
VCAN-212ENST00000515397 VASH2Q86V25 355 aa11.26□□□□□ -0.61
VCAN-212ENST00000515397 PHC3Q8NDX5 983 aa11.26□□□□□ -0.61
VCAN-212ENST00000515397 STYXQ8WUJ0 223 aa11.26□□□□□ -0.61
VCAN-212ENST00000515397 C12orf66Q96MD2 445 aa11.26□□□□□ -0.61
VCAN-212ENST00000515397 FCRL3Q96P31 734 aaPredicted RBP11.26□□□□□ -0.61
VCAN-212ENST00000515397 BBC3Q96PG8 261 aaPredicted RBP11.26□□□□□ -0.61
VCAN-212ENST00000515397 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.26□□□□□ -0.61
VCAN-212ENST00000515397 PRORYQ9H606 182 aa11.26□□□□□ -0.61
VCAN-212ENST00000515397 APMAPQ9HDC9 416 aa11.26□□□□□ -0.61
VCAN-212ENST00000515397 CHRAC1Q9NRG0 131 aa11.26□□□□□ -0.61
VCAN-212ENST00000515397 SLC39A1Q9NY26 324 aa11.26□□□□□ -0.61
VCAN-212ENST00000515397 ZDHHC3Q9NYG2 299 aa11.26□□□□□ -0.61
VCAN-212ENST00000515397 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.26□□□□□ -0.61
VCAN-212ENST00000515397 AKAP7Q9P0M2 348 aaPredicted RBP11.26□□□□□ -0.61
VCAN-212ENST00000515397 PAK5Q9P286 719 aa11.26□□□□□ -0.61
VCAN-212ENST00000515397 FEZ2Q9UHY8 353 aaPredicted RBP11.26□□□□□ -0.61
VCAN-212ENST00000515397 DRG1Q9Y295 367 aaKnown RBP11.26□□□□□ -0.61
VCAN-212ENST00000515397 B3GALT1Q9Y5Z6 326 aa11.26□□□□□ -0.61
VCAN-212ENST00000515397 ATRXP46100 2492 aa11.26□□□□□ -0.61
VCAN-212ENST00000515397 SMG1Q96Q15 3661 aaKnown RBP11.25□□□□□ -0.61
VCAN-212ENST00000515397 USP27XA6NNY8 438 aa11.25□□□□□ -0.61
VCAN-212ENST00000515397 AGAP14A8MT82 685 aa11.25□□□□□ -0.61
VCAN-212ENST00000515397 ZNF185O15231 689 aa11.25□□□□□ -0.61
VCAN-212ENST00000515397 NVLO15381 856 aaKnown RBP11.25□□□□□ -0.61
VCAN-212ENST00000515397 OR1I1O60431 355 aa11.25□□□□□ -0.61
VCAN-212ENST00000515397 ZNF189O75820 626 aaPredicted RBP11.25□□□□□ -0.61
VCAN-212ENST00000515397 SUN1O94901 812 aa11.25□□□□□ -0.61
VCAN-212ENST00000515397 GOT2P00505 430 aaKnown RBP11.25□□□□□ -0.61
VCAN-212ENST00000515397 ITGB6P18564 788 aa11.25□□□□□ -0.61
VCAN-212ENST00000515397 MSNP26038 577 aaKnown RBP11.25□□□□□ -0.61
VCAN-212ENST00000515397 ACRV1P26436 265 aa11.25□□□□□ -0.61
VCAN-212ENST00000515397 PDHA2P29803 388 aa11.25□□□□□ -0.61
VCAN-212ENST00000515397 HALP42357 657 aa11.25□□□□□ -0.61
VCAN-212ENST00000515397 PREPP48147 710 aa11.25□□□□□ -0.61
VCAN-212ENST00000515397 ARCN1P48444 511 aaKnown RBP11.25□□□□□ -0.61
VCAN-212ENST00000515397 SEMA5AQ13591 1074 aa11.25□□□□□ -0.61
VCAN-212ENST00000515397 GSE1Q14687 1217 aa11.25□□□□□ -0.61
VCAN-212ENST00000515397 SKIDA1Q1XH10 827 aa11.25□□□□□ -0.61
VCAN-212ENST00000515397 ANKS6Q68DC2 871 aa11.25□□□□□ -0.61
VCAN-212ENST00000515397 IRGCQ6NXR0 463 aa11.25□□□□□ -0.61
VCAN-212ENST00000515397 TTC27Q6P3X3 843 aa11.25□□□□□ -0.61
VCAN-212ENST00000515397 WDR74Q6RFH5 385 aaPredicted RBP11.25□□□□□ -0.61
VCAN-212ENST00000515397 WASH2PQ6VEQ5 465 aa11.25□□□□□ -0.61
VCAN-212ENST00000515397 ARHGAP22Q7Z5H3 698 aa11.25□□□□□ -0.61
VCAN-212ENST00000515397 AGBL5Q8NDL9 886 aa11.25□□□□□ -0.61
VCAN-212ENST00000515397 OR13J1Q8NGT2 312 aa11.25□□□□□ -0.61
VCAN-212ENST00000515397 OR6P1Q8NGX9 317 aa11.25□□□□□ -0.61
VCAN-212ENST00000515397 OR2L2Q8NH16 312 aa11.25□□□□□ -0.61
VCAN-212ENST00000515397 COG1Q8WTW3 980 aa11.25□□□□□ -0.61
VCAN-212ENST00000515397 ULK4Q96C45 1275 aa11.25□□□□□ -0.61
VCAN-212ENST00000515397 ELMO2Q96JJ3 720 aa11.25□□□□□ -0.61
VCAN-212ENST00000515397 RMDN2Q96LZ7 410 aa11.25□□□□□ -0.61
VCAN-212ENST00000515397 CASS4Q9NQ75 786 aa11.25□□□□□ -0.61
VCAN-212ENST00000515397 WASH6PQ9NQA3 447 aa11.25□□□□□ -0.61
VCAN-212ENST00000515397 PDP2Q9P2J9 529 aa11.25□□□□□ -0.61
VCAN-212ENST00000515397 PCDHGA7Q9Y5G6 932 aa11.25□□□□□ -0.61
VCAN-212ENST00000515397 TRBV5-4A0A0C4DH59 114 aa11.24□□□□□ -0.61
VCAN-212ENST00000515397 LILRA5A6NI73 299 aa11.24□□□□□ -0.61
VCAN-212ENST00000515397 HGSO14964 777 aaPredicted RBP11.24□□□□□ -0.61
VCAN-212ENST00000515397 RASSF9O75901 435 aa11.24□□□□□ -0.61
VCAN-212ENST00000515397 RALBP11234 206 aa11.24□□□□□ -0.61
VCAN-212ENST00000515397 EPHA4P54764 986 aa11.24□□□□□ -0.61
VCAN-212ENST00000515397 CSE1LP55060 971 aaKnown RBP11.24□□□□□ -0.61
VCAN-212ENST00000515397 SH3BP2P78314 561 aa11.24□□□□□ -0.61
VCAN-212ENST00000515397 CACNG1Q06432 222 aa11.24□□□□□ -0.61
VCAN-212ENST00000515397 DMPKQ09013 629 aa11.24□□□□□ -0.61
VCAN-212ENST00000515397 TRA2AQ13595 282 aaKnown RBP eCLIP11.24□□□□□ -0.61
VCAN-212ENST00000515397 SEMA3AQ14563 771 aa11.24□□□□□ -0.61
VCAN-212ENST00000515397 GPR33Q49SQ1 333 aa11.24□□□□□ -0.61
VCAN-212ENST00000515397 BCL7AQ4VC05 210 aa11.24□□□□□ -0.61
VCAN-212ENST00000515397 SOWAHCQ53LP3 525 aaPredicted RBP11.24□□□□□ -0.61
VCAN-212ENST00000515397 TSTD2Q5T7W7 516 aa11.24□□□□□ -0.61
VCAN-212ENST00000515397 BROXQ5VW32 411 aa11.24□□□□□ -0.61
VCAN-212ENST00000515397 FBXO38Q6PIJ6 1188 aa11.24□□□□□ -0.61
VCAN-212ENST00000515397 MAIP1Q8WWC4 291 aa11.24□□□□□ -0.61
VCAN-212ENST00000515397 MAGOHBQ96A72 148 aaKnown RBP11.24□□□□□ -0.61
VCAN-212ENST00000515397 ZNF514Q96K75 400 aaPredicted RBP11.24□□□□□ -0.61
VCAN-212ENST00000515397 PPM1MQ96MI6 270 aa11.24□□□□□ -0.61
VCAN-212ENST00000515397 TAAR9Q96RI9 348 aa11.24□□□□□ -0.61
VCAN-212ENST00000515397 DPH1Q9BZG8 443 aa11.24□□□□□ -0.61
VCAN-212ENST00000515397 POT1Q9NUX5 634 aa11.24□□□□□ -0.61
VCAN-212ENST00000515397 JRKLQ9Y4A0 524 aa11.24□□□□□ -0.61
VCAN-212ENST00000515397 DNMT3AQ9Y6K1 912 aaPredicted RBP11.24□□□□□ -0.61
VCAN-212ENST00000515397 IGLV3-16A0A075B6K0 115 aa11.23□□□□□ -0.61
VCAN-212ENST00000515397 HEATR9A2RTY3 570 aa11.23□□□□□ -0.61
VCAN-212ENST00000515397 ERI2A8K979 691 aaKnown RBP11.23□□□□□ -0.61
VCAN-212ENST00000515397 CFAP99D6REC4 459 aa11.23□□□□□ -0.61
VCAN-212ENST00000515397 GOLGA8KD6RF30 607 aa11.23□□□□□ -0.61
VCAN-212ENST00000515397 GOLGA8TH3BQL2 631 aa11.23□□□□□ -0.61
VCAN-212ENST00000515397 H7C0S8 307 aa11.23□□□□□ -0.61
VCAN-212ENST00000515397 KCNJ13O60928 360 aa11.23□□□□□ -0.61
VCAN-212ENST00000515397 AVILO75366 819 aa11.23□□□□□ -0.61
VCAN-212ENST00000515397 GAS8O95995 478 aa11.23□□□□□ -0.61
VCAN-212ENST00000515397 PRB1P04280 392 aa11.23□□□□□ -0.61
VCAN-212ENST00000515397 MTHFD1P11586 935 aaKnown RBP11.23□□□□□ -0.61
VCAN-212ENST00000515397 WT1P19544 449 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms