RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 LINGO1Q96FE5 620 aa4.92□□□□□ -1.62
HMGCS1-207ENST00000514610 OLFM1Q99784 485 aa4.92□□□□□ -1.62
HMGCS1-207ENST00000514610 NEURL2Q9BR09 285 aa4.92□□□□□ -1.62
HMGCS1-207ENST00000514610 SLC35C2Q9NQQ7 365 aa4.92□□□□□ -1.62
HMGCS1-207ENST00000514610 RHCGQ9UBD6 479 aa4.92□□□□□ -1.62
HMGCS1-207ENST00000514610 GAGE2DQ9UEU5 116 aa4.92□□□□□ -1.62
HMGCS1-207ENST00000514610 PPIEQ9UNP9 301 aaKnown RBP4.92□□□□□ -1.62
HMGCS1-207ENST00000514610 ZNF541Q9H0D2 1346 aa4.92□□□□□ -1.62
HMGCS1-207ENST00000514610 ASPDHA6ND91 283 aa4.91□□□□□ -1.62
HMGCS1-207ENST00000514610 HEPACAM2A8MVW5 462 aa4.91□□□□□ -1.62
HMGCS1-207ENST00000514610 ACOT8O14734 319 aa4.91□□□□□ -1.62
HMGCS1-207ENST00000514610 TOMM70O94826 608 aa4.91□□□□□ -1.62
HMGCS1-207ENST00000514610 ABCB1P08183 1280 aaPredicted RBP4.91□□□□□ -1.62
HMGCS1-207ENST00000514610 VPREB1P12018 145 aa4.91□□□□□ -1.62
HMGCS1-207ENST00000514610 LMAN1P49257 510 aa4.91□□□□□ -1.62
HMGCS1-207ENST00000514610 RASA2Q15283 850 aa4.91□□□□□ -1.62
HMGCS1-207ENST00000514610 IRAK1BP1Q5VVH5 260 aa4.91□□□□□ -1.62
HMGCS1-207ENST00000514610 CAPRIN2Q6IMN6 1127 aaKnown RBP4.91□□□□□ -1.62
HMGCS1-207ENST00000514610 KIAA1161Q6NSJ0 714 aa4.91□□□□□ -1.62
HMGCS1-207ENST00000514610 SPSB3Q6PJ21 355 aa4.91□□□□□ -1.62
HMGCS1-207ENST00000514610 NAGSQ8N159 534 aa4.91□□□□□ -1.62
HMGCS1-207ENST00000514610 MUC20Q8N307 709 aaPredicted RBP4.91□□□□□ -1.62
HMGCS1-207ENST00000514610 POGLUT1Q8NBL1 392 aa4.91□□□□□ -1.62
HMGCS1-207ENST00000514610 PPP4R1Q8TF05 950 aa4.91□□□□□ -1.62
HMGCS1-207ENST00000514610 PTERQ96BW5 349 aa4.91□□□□□ -1.62
HMGCS1-207ENST00000514610 OXNAD1Q96HP4 312 aaPredicted RBP4.91□□□□□ -1.62
HMGCS1-207ENST00000514610 PRMT6Q96LA8 375 aaPredicted RBP4.91□□□□□ -1.62
HMGCS1-207ENST00000514610 SLX1AQ9BQ83 275 aa4.91□□□□□ -1.62
HMGCS1-207ENST00000514610 CCDC106Q9BWC9 280 aa4.91□□□□□ -1.62
HMGCS1-207ENST00000514610 GOLPH3LQ9H4A5 285 aa4.91□□□□□ -1.62
HMGCS1-207ENST00000514610 EVA1AQ9H8M9 152 aa4.91□□□□□ -1.62
HMGCS1-207ENST00000514610 TRPC7Q9HCX4 862 aa4.91□□□□□ -1.62
HMGCS1-207ENST00000514610 NFKBIL1Q9UBC1 381 aaPredicted RBP4.91□□□□□ -1.62
HMGCS1-207ENST00000514610 ANAPC2Q9UJX6 822 aa4.91□□□□□ -1.62
HMGCS1-207ENST00000514610 YIPF1Q9Y548 306 aa4.91□□□□□ -1.62
HMGCS1-207ENST00000514610 RPS6KL1Q9Y6S9 549 aa4.91□□□□□ -1.62
HMGCS1-207ENST00000514610 TEX13DA0A0J9YY54 714 aaPredicted RBP4.9□□□□□ -1.63
HMGCS1-207ENST00000514610 PRSS51A0A1B0GVH4 220 aa4.9□□□□□ -1.63
HMGCS1-207ENST00000514610 FEZF1A0PJY2 475 aa4.9□□□□□ -1.63
HMGCS1-207ENST00000514610 ANKRD66B4E2M5 251 aa4.9□□□□□ -1.63
HMGCS1-207ENST00000514610 H0YIN7 160 aa4.9□□□□□ -1.63
HMGCS1-207ENST00000514610 BMP10O95393 424 aa4.9□□□□□ -1.63
HMGCS1-207ENST00000514610 HSP90AA1P07900 732 aaKnown RBP4.9□□□□□ -1.63
HMGCS1-207ENST00000514610 DNASE1P24855 282 aa4.9□□□□□ -1.63
HMGCS1-207ENST00000514610 TKTP29401 623 aaKnown RBP4.9□□□□□ -1.63
HMGCS1-207ENST00000514610 GABRA5P31644 462 aa4.9□□□□□ -1.63
HMGCS1-207ENST00000514610 MMP15P51511 669 aa4.9□□□□□ -1.63
HMGCS1-207ENST00000514610 EEF1A1P68104 462 aaKnown RBP4.9□□□□□ -1.63
HMGCS1-207ENST00000514610 UBXN2AP68543 259 aa4.9□□□□□ -1.63
HMGCS1-207ENST00000514610 RPL24P83731 157 aaKnown RBP4.9□□□□□ -1.63
HMGCS1-207ENST00000514610 CALD1Q05682 793 aaKnown RBP4.9□□□□□ -1.63
HMGCS1-207ENST00000514610 PRKAA1Q13131 559 aa4.9□□□□□ -1.63
HMGCS1-207ENST00000514610 EEF1A1P5Q5VTE0 462 aa4.9□□□□□ -1.63
HMGCS1-207ENST00000514610 FIGLAQ6QHK4 219 aa4.9□□□□□ -1.63
HMGCS1-207ENST00000514610 ZNF771Q7L3S4 317 aaPredicted RBP4.9□□□□□ -1.63
HMGCS1-207ENST00000514610 ZNF595Q8IYB9 648 aa4.9□□□□□ -1.63
HMGCS1-207ENST00000514610 AFAP1Q8N556 730 aa4.9□□□□□ -1.63
HMGCS1-207ENST00000514610 ZBTB8BQ8NAP8 495 aaPredicted RBP4.9□□□□□ -1.63
HMGCS1-207ENST00000514610 POMGNT2Q8NAT1 580 aa4.9□□□□□ -1.63
HMGCS1-207ENST00000514610 CCDC191Q8NCU4 936 aa4.9□□□□□ -1.63
HMGCS1-207ENST00000514610 OR10S1Q8NGN2 331 aa4.9□□□□□ -1.63
HMGCS1-207ENST00000514610 OR2AJ1Q8NGZ0 328 aa4.9□□□□□ -1.63
HMGCS1-207ENST00000514610 SMPDL3BQ92485 455 aa4.9□□□□□ -1.63
HMGCS1-207ENST00000514610 SEMA4DQ92854 862 aa4.9□□□□□ -1.63
HMGCS1-207ENST00000514610 PGAP3Q96FM1 320 aaPredicted RBP4.9□□□□□ -1.63
HMGCS1-207ENST00000514610 FAM81BQ96LP2 452 aa4.9□□□□□ -1.63
HMGCS1-207ENST00000514610 OR6C1Q96RD1 312 aa4.9□□□□□ -1.63
HMGCS1-207ENST00000514610 POLR3CQ9BUI4 534 aaPredicted RBP4.9□□□□□ -1.63
HMGCS1-207ENST00000514610 RETREG1Q9H6L5 497 aa4.9□□□□□ -1.63
HMGCS1-207ENST00000514610 TAB2Q9NYJ8 693 aa4.9□□□□□ -1.63
HMGCS1-207ENST00000514610 NPAP1Q9NZP6 1156 aa4.9□□□□□ -1.63
HMGCS1-207ENST00000514610 POU2F3Q9UKI9 436 aa4.9□□□□□ -1.63
HMGCS1-207ENST00000514610 DOCK7Q96N67 2140 aa4.9□□□□□ -1.63
HMGCS1-207ENST00000514610 BUD23O43709 281 aaKnown RBP4.89□□□□□ -1.63
HMGCS1-207ENST00000514610 SSX4O60224 188 aa4.89□□□□□ -1.63
HMGCS1-207ENST00000514610 KRT19P08727 400 aa4.89□□□□□ -1.63
HMGCS1-207ENST00000514610 AHRP35869 848 aa4.89□□□□□ -1.63
HMGCS1-207ENST00000514610 ERVFC1-1P60608 527 aa4.89□□□□□ -1.63
HMGCS1-207ENST00000514610 PNRC1Q12796 327 aaPredicted RBP4.89□□□□□ -1.63
HMGCS1-207ENST00000514610 AIMP1Q12904 312 aaKnown RBP4.89□□□□□ -1.63
HMGCS1-207ENST00000514610 SNTB1Q13884 538 aaKnown RBP4.89□□□□□ -1.63
HMGCS1-207ENST00000514610 GCNT6Q5T4J0 391 aa4.89□□□□□ -1.63
HMGCS1-207ENST00000514610 PLEKHM3Q6ZWE6 761 aa4.89□□□□□ -1.63
HMGCS1-207ENST00000514610 PIWIL4Q7Z3Z4 852 aaKnown RBP4.89□□□□□ -1.63
HMGCS1-207ENST00000514610 POC1AQ8NBT0 407 aa4.89□□□□□ -1.63
HMGCS1-207ENST00000514610 CFAP61Q8NHU2 1237 aa4.89□□□□□ -1.63
HMGCS1-207ENST00000514610 ZNF830Q96NB3 372 aaPredicted RBP4.89□□□□□ -1.63
HMGCS1-207ENST00000514610 NEK1Q96PY6 1258 aa4.89□□□□□ -1.63
HMGCS1-207ENST00000514610 ZNF556Q9HAH1 456 aa4.89□□□□□ -1.63
HMGCS1-207ENST00000514610 HHATLQ9HCP6 504 aa4.89□□□□□ -1.63
HMGCS1-207ENST00000514610 OSER1Q9NX31 292 aa4.89□□□□□ -1.63
HMGCS1-207ENST00000514610 MIOSQ9NXC5 875 aa4.89□□□□□ -1.63
HMGCS1-207ENST00000514610 C5AR2Q9P296 337 aa4.89□□□□□ -1.63
HMGCS1-207ENST00000514610 A0A0G2JNG1 304 aa4.88□□□□□ -1.63
HMGCS1-207ENST00000514610 SPRY1O43609 319 aaPredicted RBP4.88□□□□□ -1.63
HMGCS1-207ENST00000514610 PRAMEF11O60813 436 aa4.88□□□□□ -1.63
HMGCS1-207ENST00000514610 TFAP2AP05549 437 aa4.88□□□□□ -1.63
HMGCS1-207ENST00000514610 LIPFP07098 398 aa4.88□□□□□ -1.63
HMGCS1-207ENST00000514610 GJA1P17302 382 aa4.88□□□□□ -1.63
HMGCS1-207ENST00000514610 MCCP23508 829 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms