RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 OR2AG1Q9H205 316 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 ASB8Q9H765 288 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 SUDS3Q9H7L9 328 aaPredicted RBP8.21□□□□□ -1.1
CCL28-204ENST00000514421 NLE1Q9NVX2 485 aaPredicted RBP8.21□□□□□ -1.1
CCL28-204ENST00000514421 PIH1D1Q9NWS0 290 aaKnown RBP8.21□□□□□ -1.1
CCL28-204ENST00000514421 BFARQ9NZS9 450 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 GULP1Q9UBP9 304 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 FKBPLQ9UIM3 349 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 TMPRSS11EQ9UL52 423 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 RIMKLBQ9ULI2 386 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 PADI4Q9UM07 663 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 GPR34Q9UPC5 381 aa8.21□□□□□ -1.1
CCL28-204ENST00000514421 OAS3Q9Y6K5 1087 aaKnown RBP8.21□□□□□ -1.1
CCL28-204ENST00000514421 ASXL3Q9C0F0 2248 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 IQANK1A0A1B0GTG1 560 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 HEATR9A2RTY3 570 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 CPED1A4D0V7 1026 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 EME2A4GXA9 379 aaPredicted RBP8.2□□□□□ -1.1
CCL28-204ENST00000514421 AGAP14A8MT82 685 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 POC1B-GALNT4F8VUJ3 575 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 H7C0S8 307 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 GAPDHSO14556 408 aaPredicted RBP8.2□□□□□ -1.1
CCL28-204ENST00000514421 CHUKO15111 745 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 TM9SF1O15321 606 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 KCNJ13O60928 360 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 SRP72O76094 671 aaKnown RBP8.2□□□□□ -1.1
CCL28-204ENST00000514421 ZWINTO95229 277 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 PRAMEF1O95521 474 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 DHRS4L1P0CG22 281 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 ZNF8P17098 575 aaPredicted RBP8.2□□□□□ -1.1
CCL28-204ENST00000514421 PGAM1P18669 254 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 CCNFP41002 786 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 SERPINB9P50453 376 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 ZNF140P52738 457 aaPredicted RBP8.2□□□□□ -1.1
CCL28-204ENST00000514421 WDR4P57081 412 aaKnown RBP8.2□□□□□ -1.1
CCL28-204ENST00000514421 SESN2P58004 480 aaPredicted RBP8.2□□□□□ -1.1
CCL28-204ENST00000514421 GTF2H3Q13889 308 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 LRP8Q14114 963 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 SEPT6Q14141 434 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 EFTUD2Q15029 972 aaKnown RBP eCLIP8.2□□□□□ -1.1
CCL28-204ENST00000514421 NR0B2Q15466 257 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 PCID2Q5JVF3 399 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 SPANXN3Q5MJ09 141 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 ZNF648Q5T619 568 aaPredicted RBP8.2□□□□□ -1.1
CCL28-204ENST00000514421 GPRC6AQ5T6X5 926 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 FOXR1Q6PIV2 292 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 SNX20Q7Z614 316 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 NRROSQ86YC3 692 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 MPP5Q8N3R9 675 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 ARL10Q8N8L6 244 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 GPR156Q8NFN8 814 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 OR6C4Q8NGE1 309 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 HEXDCQ8WVB3 486 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 ULK4Q96C45 1275 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 MAGEB18Q96M61 343 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 SMC6Q96SB8 1091 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 SELENOSQ9BQE4 189 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 MCMBPQ9BTE3 642 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 DPEP2Q9H4A9 486 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 PPANQ9NQ55 473 aaKnown RBP8.2□□□□□ -1.1
CCL28-204ENST00000514421 SMYD2Q9NRG4 433 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 SPATS2LQ9NUQ6 558 aaKnown RBP8.2□□□□□ -1.1
CCL28-204ENST00000514421 SMOXQ9NWM0 555 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 TOR4AQ9NXH8 423 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 TAAR2Q9P1P5 351 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 TBK1Q9UHD2 729 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 PLEKHM1Q9Y4G2 1056 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 DNMT3AQ9Y6K1 912 aaPredicted RBP8.2□□□□□ -1.1
CCL28-204ENST00000514421 SLC30A1Q9Y6M5 507 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 DNAH14Q0VDD8 3507 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 LRRK1Q38SD2 2015 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 DCHS1Q96JQ0 3298 aa8.2□□□□□ -1.1
CCL28-204ENST00000514421 MYLKQ15746 1914 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 LY6G6EA0A0G2JKS1 128 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 FAM237BA0A1B0GVD1 139 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 A0A1W2PPM1 405 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 MED19A0JLT2 244 aaPredicted RBP8.19□□□□□ -1.1
CCL28-204ENST00000514421 HMX2A2RU54 273 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 FAM221BA6H8Z2 402 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 ERICH4A6NGS2 130 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 CXorf49A8MYA2 514 aaPredicted RBP8.19□□□□□ -1.1
CCL28-204ENST00000514421 FOXO6A8MYZ6 492 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 EBAG9O00559 213 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 KMOO15229 486 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 RFPL3O75679 317 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 USP1O94782 785 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 POLBP06746 335 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 GP1BAP07359 652 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 INHBAP08476 426 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 SNRPAP09012 282 aaKnown RBP8.19□□□□□ -1.1
CCL28-204ENST00000514421 MYF5P13349 255 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 ZNF7P17097 686 aaPredicted RBP8.19□□□□□ -1.1
CCL28-204ENST00000514421 KRT15P19012 456 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 KRT4P19013 534 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 MSH3P20585 1137 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 ITGALP20701 1170 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 AK4P27144 223 aaPredicted RBP8.19□□□□□ -1.1
CCL28-204ENST00000514421 PMLP29590 882 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 MC4RP32245 332 aa8.19□□□□□ -1.1
CCL28-204ENST00000514421 ACTR1BP42025 376 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms