RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 TRMT10CQ7L0Y3 403 aaKnown RBP19.85■□□□□ 0.77
USP53-208ENST00000514305 ADGRG6Q86SQ4 1221 aa19.85■□□□□ 0.77
USP53-208ENST00000514305 LRRTM4Q86VH4 590 aa19.85■□□□□ 0.77
USP53-208ENST00000514305 IGDCC3Q8IVU1 814 aa19.85■□□□□ 0.77
USP53-208ENST00000514305 FSTL5Q8N475 847 aaPredicted RBP19.85■□□□□ 0.77
USP53-208ENST00000514305 FAM181AQ8N9Y4 354 aa19.85■□□□□ 0.77
USP53-208ENST00000514305 C9orf72Q96LT7 481 aa19.85■□□□□ 0.77
USP53-208ENST00000514305 DEPDC7Q96QD5 511 aa19.85■□□□□ 0.77
USP53-208ENST00000514305 CLPBQ9H078 707 aa19.85■□□□□ 0.77
USP53-208ENST00000514305 OR2AG1Q9H205 316 aa19.85■□□□□ 0.77
USP53-208ENST00000514305 CCDC68Q9H2F9 335 aa19.85■□□□□ 0.77
USP53-208ENST00000514305 CARS2Q9HA77 564 aaKnown RBP19.85■□□□□ 0.77
USP53-208ENST00000514305 CYP4F12Q9HCS2 524 aa19.85■□□□□ 0.77
USP53-208ENST00000514305 RRAGDQ9NQL2 400 aaPredicted RBP19.85■□□□□ 0.77
USP53-208ENST00000514305 ZFATQ9P243 1243 aa19.85■□□□□ 0.77
USP53-208ENST00000514305 TXNDC16Q9P2K2 825 aa19.85■□□□□ 0.77
USP53-208ENST00000514305 ATXN10Q9UBB4 475 aa19.85■□□□□ 0.77
USP53-208ENST00000514305 APOBEC3BQ9UH17 382 aaKnown RBP19.85■□□□□ 0.77
USP53-208ENST00000514305 ZNHIT2Q9UHR6 403 aa19.85■□□□□ 0.77
USP53-208ENST00000514305 TMEM98Q9Y2Y6 226 aa19.85■□□□□ 0.77
USP53-208ENST00000514305 CSNK1G3Q9Y6M4 447 aa19.85■□□□□ 0.77
USP53-208ENST00000514305 ATRXP46100 2492 aa19.85■□□□□ 0.77
USP53-208ENST00000514305 H3BMM5 538 aa19.84■□□□□ 0.77
USP53-208ENST00000514305 AQP9O43315 295 aa19.84■□□□□ 0.77
USP53-208ENST00000514305 GRID2O43424 1007 aa19.84■□□□□ 0.77
USP53-208ENST00000514305 OPA1O60313 960 aa19.84■□□□□ 0.77
USP53-208ENST00000514305 BRINP1O60477 761 aa19.84■□□□□ 0.77
USP53-208ENST00000514305 EIF2S3P41091 472 aaKnown RBP19.84■□□□□ 0.77
USP53-208ENST00000514305 FASTKD3Q14CZ7 662 aaKnown RBP19.84■□□□□ 0.77
USP53-208ENST00000514305 DBN1Q16643 649 aa19.84■□□□□ 0.77
USP53-208ENST00000514305 HSP90AA5PQ58FG0 334 aa19.84■□□□□ 0.77
USP53-208ENST00000514305 ZNF470Q6ECI4 717 aa19.84■□□□□ 0.77
USP53-208ENST00000514305 RD3Q7Z3Z2 195 aa19.84■□□□□ 0.77
USP53-208ENST00000514305 CILP2Q8IUL8 1156 aa19.84■□□□□ 0.77
USP53-208ENST00000514305 PHACTR4Q8IZ21 702 aa19.84■□□□□ 0.77
USP53-208ENST00000514305 CNPY4Q8N129 248 aa19.84■□□□□ 0.77
USP53-208ENST00000514305 SCARF2Q96GP6 870 aaPredicted RBP19.84■□□□□ 0.77
USP53-208ENST00000514305 CAAP1Q9H8G2 361 aa19.84■□□□□ 0.77
USP53-208ENST00000514305 IARS2Q9NSE4 1012 aaKnown RBP19.84■□□□□ 0.77
USP53-208ENST00000514305 TRNAU1APQ9NX07 287 aaKnown RBP19.84■□□□□ 0.77
USP53-208ENST00000514305 SUFUQ9UMX1 484 aa19.84■□□□□ 0.77
USP53-208ENST00000514305 DOLKQ9UPQ8 538 aa19.84■□□□□ 0.77
USP53-208ENST00000514305 PCDHB1Q9Y5F3 818 aa19.84■□□□□ 0.77
USP53-208ENST00000514305 IGLV3-16A0A075B6K0 115 aa19.83■□□□□ 0.77
USP53-208ENST00000514305 EIF4E1BA6NMX2 242 aaKnown RBP19.83■□□□□ 0.77
USP53-208ENST00000514305 PRMT5O14744 637 aaPredicted RBP19.83■□□□□ 0.77
USP53-208ENST00000514305 TLX3O43711 291 aaPredicted RBP19.83■□□□□ 0.77
USP53-208ENST00000514305 ECHS1P30084 290 aa19.83■□□□□ 0.77
USP53-208ENST00000514305 GNPDA1P46926 289 aa19.83■□□□□ 0.77
USP53-208ENST00000514305 ILF3Q12906 894 aaKnown RBP eCLIP19.83■□□□□ 0.77
USP53-208ENST00000514305 EIF2B5Q13144 721 aaKnown RBP19.83■□□□□ 0.77
USP53-208ENST00000514305 NAB1Q13506 487 aa19.83■□□□□ 0.77
USP53-208ENST00000514305 ALG11Q2TAA5 492 aa19.83■□□□□ 0.77
USP53-208ENST00000514305 TRIM74Q86UV6 250 aa19.83■□□□□ 0.77
USP53-208ENST00000514305 GKN2Q86XP6 184 aa19.83■□□□□ 0.77
USP53-208ENST00000514305 TRAPPC5Q8IUR0 188 aa19.83■□□□□ 0.77
USP53-208ENST00000514305 PIANPQ8IYJ0 282 aa19.83■□□□□ 0.77
USP53-208ENST00000514305 SNIP1Q8TAD8 396 aaKnown RBP19.83■□□□□ 0.77
USP53-208ENST00000514305 IFI44Q8TCB0 444 aa19.83■□□□□ 0.77
USP53-208ENST00000514305 MAPK15Q8TD08 544 aa19.83■□□□□ 0.77
USP53-208ENST00000514305 LMX1AQ8TE12 382 aa19.83■□□□□ 0.77
USP53-208ENST00000514305 FGF11Q92914 225 aa19.83■□□□□ 0.77
USP53-208ENST00000514305 TSACCQ96A04 125 aaPredicted RBP19.83■□□□□ 0.77
USP53-208ENST00000514305 OR2M4Q96R27 311 aa19.83■□□□□ 0.77
USP53-208ENST00000514305 GSDMCQ9BYG8 508 aa19.83■□□□□ 0.77
USP53-208ENST00000514305 LRRC4CQ9HCJ2 640 aa19.83■□□□□ 0.77
USP53-208ENST00000514305 MOCS1Q9NZB8 636 aa19.83■□□□□ 0.77
USP53-208ENST00000514305 GNPTGQ9UJJ9 305 aa19.83■□□□□ 0.77
USP53-208ENST00000514305 FBXO5Q9UKT4 447 aa19.83■□□□□ 0.77
USP53-208ENST00000514305 COMMD10Q9Y6G5 202 aa19.83■□□□□ 0.77
USP53-208ENST00000514305 OAS3Q9Y6K5 1087 aaKnown RBP19.83■□□□□ 0.77
USP53-208ENST00000514305 CHUKO15111 745 aa19.82■□□□□ 0.76
USP53-208ENST00000514305 FTH1P02794 183 aa19.82■□□□□ 0.76
USP53-208ENST00000514305 ERVK-10P10266 1014 aa19.82■□□□□ 0.76
USP53-208ENST00000514305 MYF5P13349 255 aa19.82■□□□□ 0.76
USP53-208ENST00000514305 ZNF8P17098 575 aaPredicted RBP19.82■□□□□ 0.76
USP53-208ENST00000514305 ARNTP27540 789 aa19.82■□□□□ 0.76
USP53-208ENST00000514305 SSTR1P30872 391 aa19.82■□□□□ 0.76
USP53-208ENST00000514305 CDKN1CP49918 316 aaPredicted RBP19.82■□□□□ 0.76
USP53-208ENST00000514305 PMS2P54278 862 aa19.82■□□□□ 0.76
USP53-208ENST00000514305 ADARP55265 1226 aaKnown RBP19.82■□□□□ 0.76
USP53-208ENST00000514305 TYSND1Q2T9J0 566 aa19.82■□□□□ 0.76
USP53-208ENST00000514305 SOWAHCQ53LP3 525 aaPredicted RBP19.82■□□□□ 0.76
USP53-208ENST00000514305 TMEM220Q6QAJ8 160 aa19.82■□□□□ 0.76
USP53-208ENST00000514305 MARK2Q7KZI7 788 aaKnown RBP19.82■□□□□ 0.76
USP53-208ENST00000514305 GALNT7Q86SF2 657 aa19.82■□□□□ 0.76
USP53-208ENST00000514305 SLC26A11Q86WA9 606 aa19.82■□□□□ 0.76
USP53-208ENST00000514305 OR1E3Q8WZA6 343 aa19.82■□□□□ 0.76
USP53-208ENST00000514305 GLMNQ92990 594 aa19.82■□□□□ 0.76
USP53-208ENST00000514305 PANX3Q96QZ0 392 aa19.82■□□□□ 0.76
USP53-208ENST00000514305 CDC42EP4Q9H3Q1 356 aaKnown RBP19.82■□□□□ 0.76
USP53-208ENST00000514305 FGF22Q9HCT0 170 aa19.82■□□□□ 0.76
USP53-208ENST00000514305 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.82■□□□□ 0.76
USP53-208ENST00000514305 TMPRSS11EQ9UL52 423 aa19.82■□□□□ 0.76
USP53-208ENST00000514305 CORO1CQ9ULV4 474 aaPredicted RBP19.82■□□□□ 0.76
USP53-208ENST00000514305 V9GYY5 206 aaPredicted RBP19.82■□□□□ 0.76
USP53-208ENST00000514305 SCN8AQ9UQD0 1980 aa19.82■□□□□ 0.76
USP53-208ENST00000514305 LOC400499M0QZD8 3231 aa19.81■□□□□ 0.76
USP53-208ENST00000514305 LY6G6EA0A0G2JKS1 128 aa19.81■□□□□ 0.76
USP53-208ENST00000514305 UBA6A0AVT1 1052 aaPredicted RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms