RNA–Protein interactions for RNA: ENST00000513858.5

SEC31A-237, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC31A, Length 3,687 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-237ENST00000513858 TUBB1Q9H4B7 451 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 TFB2MQ9H5Q4 396 aaKnown RBP4.53□□□□□ -1.68
SEC31A-237ENST00000513858 GPAMQ9HCL2 828 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 CD93Q9NPY3 652 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 SLC52A3Q9NQ40 469 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 SATB2Q9UPW6 733 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 EDDM13A0A1B0GTR0 161 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 A8MX80 341 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 TMEM233B4DJY2 109 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 PSMD11O00231 422 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 CDC7O00311 574 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 NPHS1O60500 1241 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 KAT7O95251 611 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 FUCA1P04066 466 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 VIMP08670 466 aaKnown RBP4.53□□□□□ -1.68
SEC31A-237ENST00000513858 PRR35P0CG20 571 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 RALBP11234 206 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 ADRB3P13945 408 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 PKMP14618 531 aaKnown RBP4.53□□□□□ -1.68
SEC31A-237ENST00000513858 FMO4P31512 558 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 CLCN2P51788 898 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 FOXA1P55317 472 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 NCALDP61601 193 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 SH3BP2P78314 561 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 CTAG1AP78358 180 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 ILF2Q12905 390 aaKnown RBP4.53□□□□□ -1.68
SEC31A-237ENST00000513858 TUBA3CQ13748 450 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 RCN2Q14257 317 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 CSHL1Q14406 222 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 GPR33Q49SQ1 333 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 SLC9B1Q4ZJI4 515 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 ARL13AQ5H913 290 aaPredicted RBP4.53□□□□□ -1.68
SEC31A-237ENST00000513858 CFAP157Q5JU67 520 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 VWA5B1Q5TIE3 1220 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 CHSY3Q70JA7 882 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 KRT77Q7Z794 578 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 NUDCD3Q8IVD9 361 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 WDR75Q8IWA0 830 aaKnown RBP4.53□□□□□ -1.68
SEC31A-237ENST00000513858 IL17RCQ8NAC3 791 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 TTC16Q8NEE8 873 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 OR6P1Q8NGX9 317 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 FBXO27Q8NI29 283 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 TTC8Q8TAM2 541 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 PIWIL2Q8TC59 973 aaKnown RBP4.53□□□□□ -1.68
SEC31A-237ENST00000513858 SCAMP4Q969E2 229 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 DTD2Q96FN9 168 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 GUCD1Q96NT3 240 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 MENTQ9BUN1 341 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 TMEM120AQ9BXJ8 343 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 MKRN2Q9H000 416 aaKnown RBP4.53□□□□□ -1.68
SEC31A-237ENST00000513858 PIDD1Q9HB75 910 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 HAUS2Q9NVX0 235 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 DNAJC28Q9NX36 388 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 KCNK4Q9NYG8 393 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 ZFR2Q9UPR6 939 aaKnown RBP4.53□□□□□ -1.68
SEC31A-237ENST00000513858 CCL27Q9Y4X3 112 aa4.53□□□□□ -1.68
SEC31A-237ENST00000513858 LAMA5O15230 3695 aa4.52□□□□□ -1.69
SEC31A-237ENST00000513858 A0A1W2PQ67 120 aa4.52□□□□□ -1.69
SEC31A-237ENST00000513858 ANKRD65E5RJM6 399 aa4.52□□□□□ -1.69
SEC31A-237ENST00000513858 LSM1O15116 133 aaKnown RBP4.52□□□□□ -1.69
SEC31A-237ENST00000513858 GPC4O75487 556 aa4.52□□□□□ -1.69
SEC31A-237ENST00000513858 IPO13O94829 963 aaKnown RBP4.52□□□□□ -1.69
SEC31A-237ENST00000513858 UBOX5O94941 541 aa4.52□□□□□ -1.69
SEC31A-237ENST00000513858 IMPDH1P20839 514 aa4.52□□□□□ -1.69
SEC31A-237ENST00000513858 GRK2P25098 689 aa4.52□□□□□ -1.69
SEC31A-237ENST00000513858 MPSTP25325 297 aa4.52□□□□□ -1.69
SEC31A-237ENST00000513858 AOAHP28039 575 aa4.52□□□□□ -1.69
SEC31A-237ENST00000513858 CPOXP36551 454 aa4.52□□□□□ -1.69
SEC31A-237ENST00000513858 GRIA2P42262 883 aa4.52□□□□□ -1.69
SEC31A-237ENST00000513858 GALK1P51570 392 aa4.52□□□□□ -1.69
SEC31A-237ENST00000513858 HERVK_113P63132 956 aa4.52□□□□□ -1.69
SEC31A-237ENST00000513858 IRX4P78413 519 aa4.52□□□□□ -1.69
SEC31A-237ENST00000513858 E2F2Q14209 437 aa4.52□□□□□ -1.69
SEC31A-237ENST00000513858 TMEM259Q4ZIN3 620 aa4.52□□□□□ -1.69
SEC31A-237ENST00000513858 ZNF648Q5T619 568 aaPredicted RBP4.52□□□□□ -1.69
SEC31A-237ENST00000513858 GRAMD4Q6IC98 578 aa4.52□□□□□ -1.69
SEC31A-237ENST00000513858 UGT3A1Q6NUS8 523 aa4.52□□□□□ -1.69
SEC31A-237ENST00000513858 CERS6Q6ZMG9 384 aa4.52□□□□□ -1.69
SEC31A-237ENST00000513858 USP45Q70EL2 814 aa4.52□□□□□ -1.69
SEC31A-237ENST00000513858 KLHDC8AQ8IYD2 350 aa4.52□□□□□ -1.69
SEC31A-237ENST00000513858 CACNA2D3Q8IZS8 1091 aa4.52□□□□□ -1.69
SEC31A-237ENST00000513858 PDPRQ8NCN5 879 aa4.52□□□□□ -1.69
SEC31A-237ENST00000513858 CCDC197Q8NCU1 140 aa4.52□□□□□ -1.69
SEC31A-237ENST00000513858 NSUN5Q96P11 429 aaKnown RBP4.52□□□□□ -1.69
SEC31A-237ENST00000513858 ERVK-6Q9BXR3 956 aa4.52□□□□□ -1.69
SEC31A-237ENST00000513858 YIPF3Q9GZM5 350 aa4.52□□□□□ -1.69
SEC31A-237ENST00000513858 NMUR2Q9GZQ4 415 aa4.52□□□□□ -1.69
SEC31A-237ENST00000513858 CDH19Q9H159 772 aa4.52□□□□□ -1.69
SEC31A-237ENST00000513858 ABCG8Q9H221 673 aa4.52□□□□□ -1.69
SEC31A-237ENST00000513858 ALG9Q9H6U8 611 aa4.52□□□□□ -1.69
SEC31A-237ENST00000513858 VCX3AQ9NNX9 186 aa4.52□□□□□ -1.69
SEC31A-237ENST00000513858 CD84Q9UIB8 345 aa4.52□□□□□ -1.69
SEC31A-237ENST00000513858 PCTPQ9UKL6 214 aa4.52□□□□□ -1.69
SEC31A-237ENST00000513858 PNMA8BQ9ULN7 279 aaPredicted RBP4.52□□□□□ -1.69
SEC31A-237ENST00000513858 PLA2G4CQ9UP65 541 aa4.52□□□□□ -1.69
SEC31A-237ENST00000513858 FAM50BQ9Y247 325 aa4.52□□□□□ -1.69
SEC31A-237ENST00000513858 NEUROG3Q9Y4Z2 214 aa4.52□□□□□ -1.69
SEC31A-237ENST00000513858 FADS3Q9Y5Q0 445 aa4.52□□□□□ -1.69
SEC31A-237ENST00000513858 CFAP47Q6ZTR5 3102 aa4.52□□□□□ -1.69
SEC31A-237ENST00000513858 RGSL1A5PLK6 1076 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms