RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 ILF3Q12906 894 aaKnown RBP eCLIP11.12□□□□□ -0.63
HTT-213ENST00000513806 DNAJC3Q13217 504 aa11.12□□□□□ -0.63
HTT-213ENST00000513806 BMPR2Q13873 1038 aa11.12□□□□□ -0.63
HTT-213ENST00000513806 FRG1Q14331 258 aaKnown RBP11.12□□□□□ -0.63
HTT-213ENST00000513806 ZNF460Q14592 562 aa11.12□□□□□ -0.63
HTT-213ENST00000513806 SLMAPQ14BN4 828 aa11.12□□□□□ -0.63
HTT-213ENST00000513806 ELOCQ15369 112 aa11.12□□□□□ -0.63
HTT-213ENST00000513806 ZNF658BQ4V348 819 aaPredicted RBP11.12□□□□□ -0.63
HTT-213ENST00000513806 ZNF761Q86XN6 746 aaPredicted RBP11.12□□□□□ -0.63
HTT-213ENST00000513806 GKN2Q86XP6 184 aa11.12□□□□□ -0.63
HTT-213ENST00000513806 GPATCH11Q8N954 259 aa11.12□□□□□ -0.63
HTT-213ENST00000513806 SIDT2Q8NBJ9 832 aaKnown RBP11.12□□□□□ -0.63
HTT-213ENST00000513806 OR2L2Q8NH16 312 aa11.12□□□□□ -0.63
HTT-213ENST00000513806 GIMAP7Q8NHV1 300 aa11.12□□□□□ -0.63
HTT-213ENST00000513806 ZDHHC1Q8WTX9 485 aa11.12□□□□□ -0.63
HTT-213ENST00000513806 HEXDCQ8WVB3 486 aa11.12□□□□□ -0.63
HTT-213ENST00000513806 JPH3Q8WXH2 748 aaPredicted RBP11.12□□□□□ -0.63
HTT-213ENST00000513806 TCF12Q99081 682 aa11.12□□□□□ -0.63
HTT-213ENST00000513806 TTC1Q99614 292 aa11.12□□□□□ -0.63
HTT-213ENST00000513806 NRTNQ99748 197 aa11.12□□□□□ -0.63
HTT-213ENST00000513806 OLFM1Q99784 485 aa11.12□□□□□ -0.63
HTT-213ENST00000513806 TIMM29Q9BSF4 260 aa11.12□□□□□ -0.63
HTT-213ENST00000513806 AARSD1Q9BTE6 412 aaKnown RBP11.12□□□□□ -0.63
HTT-213ENST00000513806 GSDMCQ9BYG8 508 aa11.12□□□□□ -0.63
HTT-213ENST00000513806 WWP1Q9H0M0 922 aa11.12□□□□□ -0.63
HTT-213ENST00000513806 DPEP2Q9H4A9 486 aa11.12□□□□□ -0.63
HTT-213ENST00000513806 COG4Q9H9E3 785 aa11.12□□□□□ -0.63
HTT-213ENST00000513806 CAB39LQ9H9S4 337 aa11.12□□□□□ -0.63
HTT-213ENST00000513806 INTS10Q9NVR2 710 aaKnown RBP11.12□□□□□ -0.63
HTT-213ENST00000513806 GNPTGQ9UJJ9 305 aa11.12□□□□□ -0.63
HTT-213ENST00000513806 RAB21Q9UL25 225 aa11.12□□□□□ -0.63
HTT-213ENST00000513806 GPR34Q9UPC5 381 aa11.12□□□□□ -0.63
HTT-213ENST00000513806 RUVBL2Q9Y230 463 aaKnown RBP11.12□□□□□ -0.63
HTT-213ENST00000513806 MTO1Q9Y2Z2 717 aaKnown RBP11.12□□□□□ -0.63
HTT-213ENST00000513806 SPEGQ15772 3267 aa11.12□□□□□ -0.63
HTT-213ENST00000513806 LY6G6EA0A0G2JKS1 128 aa11.11□□□□□ -0.63
HTT-213ENST00000513806 MGAT4DA6NG13 374 aa11.11□□□□□ -0.63
HTT-213ENST00000513806 PRR19A6NJB7 356 aa11.11□□□□□ -0.63
HTT-213ENST00000513806 OR52A4PA6NMU1 304 aa11.11□□□□□ -0.63
HTT-213ENST00000513806 PDZK1P1A8MUH7 402 aa11.11□□□□□ -0.63
HTT-213ENST00000513806 GPR89AB7ZAQ6 455 aa11.11□□□□□ -0.63
HTT-213ENST00000513806 PCDHGA12O60330 932 aa11.11□□□□□ -0.63
HTT-213ENST00000513806 NOBOXO60393 691 aa11.11□□□□□ -0.63
HTT-213ENST00000513806 DFNA5O60443 496 aa11.11□□□□□ -0.63
HTT-213ENST00000513806 GPR89BP0CG08 455 aa11.11□□□□□ -0.63
HTT-213ENST00000513806 BRAFP15056 766 aa11.11□□□□□ -0.63
HTT-213ENST00000513806 CHRM3P20309 590 aa11.11□□□□□ -0.63
HTT-213ENST00000513806 RPS3P23396 243 aaKnown RBP eCLIP11.11□□□□□ -0.63
HTT-213ENST00000513806 PPARGP37231 505 aaPredicted RBP11.11□□□□□ -0.63
HTT-213ENST00000513806 CLCNKAP51800 687 aa11.11□□□□□ -0.63
HTT-213ENST00000513806 HSPA14Q0VDF9 509 aa11.11□□□□□ -0.63
HTT-213ENST00000513806 SLC29A2Q14542 456 aa11.11□□□□□ -0.63
HTT-213ENST00000513806 CLCA4Q14CN2 919 aa11.11□□□□□ -0.63
HTT-213ENST00000513806 RNF187Q5TA31 235 aaPredicted RBP11.11□□□□□ -0.63
HTT-213ENST00000513806 HECTD2Q5U5R9 776 aa11.11□□□□□ -0.63
HTT-213ENST00000513806 CEP128Q6ZU80 1094 aa11.11□□□□□ -0.63
HTT-213ENST00000513806 ZC3HC1Q86WB0 502 aaKnown RBP11.11□□□□□ -0.63
HTT-213ENST00000513806 NAXDQ8IW45 347 aa11.11□□□□□ -0.63
HTT-213ENST00000513806 SLC35F3Q8IY50 421 aa11.11□□□□□ -0.63
HTT-213ENST00000513806 NAGSQ8N159 534 aa11.11□□□□□ -0.63
HTT-213ENST00000513806 FSTL5Q8N475 847 aaPredicted RBP11.11□□□□□ -0.63
HTT-213ENST00000513806 DEFB124Q8NES8 71 aa11.11□□□□□ -0.63
HTT-213ENST00000513806 OR2W6PQ8NHA6 318 aa11.11□□□□□ -0.63
HTT-213ENST00000513806 RHBDD1Q8TEB9 315 aa11.11□□□□□ -0.63
HTT-213ENST00000513806 ELMO2Q96JJ3 720 aa11.11□□□□□ -0.63
HTT-213ENST00000513806 RMDN2Q96LZ7 410 aa11.11□□□□□ -0.63
HTT-213ENST00000513806 GPR21Q99679 349 aa11.11□□□□□ -0.63
HTT-213ENST00000513806 CIDEBQ9UHD4 219 aa11.11□□□□□ -0.63
HTT-213ENST00000513806 U3KQA8 63 aa11.11□□□□□ -0.63
HTT-213ENST00000513806 COL5A1P20908 1838 aaPredicted RBP11.11□□□□□ -0.63
HTT-213ENST00000513806 SNRNP200O75643 2136 aaKnown RBP11.11□□□□□ -0.63
HTT-213ENST00000513806 UNC13CQ8NB66 2214 aa11.11□□□□□ -0.63
HTT-213ENST00000513806 A0A087WUV0 522 aaPredicted RBP11.1□□□□□ -0.63
HTT-213ENST00000513806 FAM95CA0A1B0GW59 222 aa11.1□□□□□ -0.63
HTT-213ENST00000513806 KRT87PA6NCN2 255 aa11.1□□□□□ -0.63
HTT-213ENST00000513806 A6NCN8 305 aa11.1□□□□□ -0.63
HTT-213ENST00000513806 FOXO6A8MYZ6 492 aa11.1□□□□□ -0.63
HTT-213ENST00000513806 E5RI56 91 aa11.1□□□□□ -0.63
HTT-213ENST00000513806 GIPC1O14908 333 aa11.1□□□□□ -0.63
HTT-213ENST00000513806 YKT6O15498 198 aa11.1□□□□□ -0.63
HTT-213ENST00000513806 SPAG6O75602 509 aa11.1□□□□□ -0.63
HTT-213ENST00000513806 FTH1P02794 183 aa11.1□□□□□ -0.63
HTT-213ENST00000513806 ZNF883P0CG24 379 aa11.1□□□□□ -0.63
HTT-213ENST00000513806 AOAHP28039 575 aa11.1□□□□□ -0.63
HTT-213ENST00000513806 GCAP28676 217 aa11.1□□□□□ -0.63
HTT-213ENST00000513806 PHBP35232 272 aa11.1□□□□□ -0.63
HTT-213ENST00000513806 HSD17B3P37058 310 aa11.1□□□□□ -0.63
HTT-213ENST00000513806 CLCN7P51798 805 aa11.1□□□□□ -0.63
HTT-213ENST00000513806 TUBB4BP68371 445 aa11.1□□□□□ -0.63
HTT-213ENST00000513806 RSPO4Q2I0M5 234 aaPredicted RBP11.1□□□□□ -0.63
HTT-213ENST00000513806 SYTL3Q4VX76 610 aa11.1□□□□□ -0.63
HTT-213ENST00000513806 CCDC157Q569K6 752 aa11.1□□□□□ -0.63
HTT-213ENST00000513806 ACSBG2Q5FVE4 666 aa11.1□□□□□ -0.63
HTT-213ENST00000513806 C6orf132Q5T0Z8 1188 aa11.1□□□□□ -0.63
HTT-213ENST00000513806 TRMT10CQ7L0Y3 403 aaKnown RBP11.1□□□□□ -0.63
HTT-213ENST00000513806 SLC26A11Q86WA9 606 aa11.1□□□□□ -0.63
HTT-213ENST00000513806 CEP97Q8IW35 865 aa11.1□□□□□ -0.63
HTT-213ENST00000513806 LMNTD2Q8IXW0 634 aa11.1□□□□□ -0.63
HTT-213ENST00000513806 EIF1ADQ8N9N8 165 aaKnown RBP11.1□□□□□ -0.63
HTT-213ENST00000513806 PHC3Q8NDX5 983 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms