RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 LARP4Q71RC2 724 aaKnown RBP eCLIP8.24□□□□□ -1.09
RNF4-220ENST00000513578 LONP2Q86WA8 852 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 SPNS2Q8IVW8 549 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 PARP9Q8IXQ6 854 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 TCAIMQ8N3R3 496 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 KIF2BQ8N4N8 673 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 CLDN19Q8N6F1 224 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 OR56A4Q8NGH8 313 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 KCNV2Q8TDN2 545 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 SUSD6Q92537 303 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 FAM136AQ96C01 138 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 CHFRQ96EP1 664 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 CCDC97Q96F63 343 aaPredicted RBP8.24□□□□□ -1.09
RNF4-220ENST00000513578 DCUN1D1Q96GG9 259 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 MSLNLQ96KJ4 702 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 ZNF382Q96SR6 550 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 RTKNQ9BST9 563 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 TRMT61BQ9BVS5 477 aaKnown RBP8.24□□□□□ -1.09
RNF4-220ENST00000513578 SPATA16Q9BXB7 569 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 SLC12A9Q9BXP2 914 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 MTG2Q9H4K7 406 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 SARS2Q9NP81 518 aaKnown RBP8.24□□□□□ -1.09
RNF4-220ENST00000513578 TNFRSF12AQ9NP84 129 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 MID1IP1Q9NPA3 183 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 TRPV5Q9NQA5 729 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 PRSS16Q9NQE7 514 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 TMEM45AQ9NWC5 275 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 CD274Q9NZQ7 290 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 SARDHQ9UL12 918 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 HCN2Q9UL51 889 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 CHD9Q3L8U1 2897 aa8.24□□□□□ -1.09
RNF4-220ENST00000513578 ZFC3H1O60293 1989 aaKnown RBP8.24□□□□□ -1.09
RNF4-220ENST00000513578 TRANK1O15050 2925 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 MUC3AQ02505 3323 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 PIEZO1Q92508 2521 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 TMEM265A0A087WTH1 108 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 FADS2P1A8MWK0 482 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 TMEM233B4DJY2 109 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 E9PBE3 544 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 ANHXE9PGG2 379 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 GFYI3L273 518 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 KPNA3O00505 521 aaPredicted RBP8.23□□□□□ -1.09
RNF4-220ENST00000513578 DCXO43602 365 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 KLHL41O60662 606 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 SLCO2B1O94956 709 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 TRIM16O95361 564 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 ATP6V1G2O95670 118 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 JUNP05412 331 aaKnown RBP8.23□□□□□ -1.09
RNF4-220ENST00000513578 ELFN1P0C7U0 828 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 PRR35P0CG20 571 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 UROSP10746 265 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 ADRB3P13945 408 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 VCLP18206 1134 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 PIK3R1P27986 724 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 TEAD1P28347 426 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 GDI1P31150 447 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 HNRNPH1P31943 449 aaKnown RBP8.23□□□□□ -1.09
RNF4-220ENST00000513578 CCR7P32248 378 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 ETV3P41162 512 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 IL12RB1P42701 662 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 PIK3CGP48736 1102 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 ACADVLP49748 655 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 CCR3P51677 355 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 CDH13P55290 713 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 SEMG2Q02383 582 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 CAMK2GQ13555 558 aaPredicted RBP8.23□□□□□ -1.09
RNF4-220ENST00000513578 PTK2BQ14289 1009 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 SQLEQ14534 574 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 AGERQ15109 404 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 MAPRE2Q15555 327 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 PDCD2Q16342 344 aaPredicted RBP8.23□□□□□ -1.09
RNF4-220ENST00000513578 BCL7AQ4VC05 210 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 OGFOD2Q6N063 350 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 FBXL19Q6PCT2 694 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 PARM1Q6UWI2 310 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 SERPINA13PQ6UXR4 307 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 FRA10AC1Q70Z53 315 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 ERN2Q76MJ5 926 aaKnown RBP8.23□□□□□ -1.09
RNF4-220ENST00000513578 PACS2Q86VP3 889 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 KLHDC8AQ8IYD2 350 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 RBM15BQ8NDT2 890 aaKnown RBP8.23□□□□□ -1.09
RNF4-220ENST00000513578 FAM13CQ8NE31 585 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 AGR3Q8TD06 166 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 TRPC4APQ8TEL6 797 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 EXT2Q93063 718 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 SCAMP4Q969E2 229 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 GLYATL1Q969I3 302 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 FAM131CQ96AQ9 280 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 AP2M1Q96CW1 435 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 C19orf60Q96EN9 201 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 LRCH3Q96II8 777 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 LENG8Q96PV6 779 aaPredicted RBP8.23□□□□□ -1.09
RNF4-220ENST00000513578 HGH1Q9BTY7 390 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 RIOK2Q9BVS4 552 aaKnown RBP8.23□□□□□ -1.09
RNF4-220ENST00000513578 APOL5Q9BWW9 433 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 SHCBP1LQ9BZQ2 653 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 RSPH9Q9H1X1 276 aaPredicted RBP8.23□□□□□ -1.09
RNF4-220ENST00000513578 FBRSQ9HAH7 460 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 ZBTB26Q9HCK0 441 aa8.23□□□□□ -1.09
RNF4-220ENST00000513578 ACSS2Q9NR19 701 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms