RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 DENND5AQ6IQ26 1287 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 DUS1LQ6P1R4 473 aaKnown RBP6.38□□□□□ -1.39
KDM3B-208ENST00000512928 WDR74Q6RFH5 385 aaPredicted RBP6.38□□□□□ -1.39
KDM3B-208ENST00000512928 PCSK4Q6UW60 755 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 ABRAXAS1Q6UWZ7 409 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 FAM83HQ6ZRV2 1179 aaPredicted RBP6.38□□□□□ -1.39
KDM3B-208ENST00000512928 FAM92BQ6ZTR7 304 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 TMEM26Q6ZUK4 368 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 MICALCLQ6ZW33 695 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 SNX20Q7Z614 316 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 C11orf96Q7Z7L8 435 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 VASH2Q86V25 355 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 SERPINA9Q86WD7 417 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 PLXDC1Q8IUK5 500 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 CFAP206Q8IYR0 622 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 NXPE1Q8N323 547 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 RASGEF1CQ8N431 466 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 GPR150Q8NGU9 434 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 DTX3LQ8TDB6 740 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 PMEPA1Q969W9 287 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 COL26A1Q96A83 441 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 ELMO2Q96JJ3 720 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 ZNF514Q96K75 400 aaPredicted RBP6.38□□□□□ -1.39
KDM3B-208ENST00000512928 C12orf66Q96MD2 445 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 TAAR9Q96RI9 348 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 CCNL2Q96S94 520 aaPredicted RBP6.38□□□□□ -1.39
KDM3B-208ENST00000512928 WWP1Q9H0M0 922 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 EPB41L1Q9H4G0 881 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 PRORYQ9H606 182 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 ETNK1Q9HBU6 452 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 POT1Q9NUX5 634 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 SMARCAL1Q9NZC9 954 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 WDR37Q9Y2I8 494 aa6.38□□□□□ -1.39
KDM3B-208ENST00000512928 ZNF106Q9H2Y7 1883 aaKnown RBP6.38□□□□□ -1.39
KDM3B-208ENST00000512928 TEX51A0A1B0GUA7 166 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 MGAT4DA6NG13 374 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 OR51F1A6NGY5 319 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 ERI2A8K979 691 aaKnown RBP6.37□□□□□ -1.39
KDM3B-208ENST00000512928 STMND1H3BQB6 276 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 CAPN5O15484 640 aaPredicted RBP6.37□□□□□ -1.39
KDM3B-208ENST00000512928 KCNJ13O60928 360 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 ZSCAN5DPP0CG00 497 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 MTHFD1P11586 935 aaKnown RBP6.37□□□□□ -1.39
KDM3B-208ENST00000512928 ATP1B2P14415 290 aaPredicted RBP6.37□□□□□ -1.39
KDM3B-208ENST00000512928 MSNP26038 577 aaKnown RBP6.37□□□□□ -1.39
KDM3B-208ENST00000512928 ACRV1P26436 265 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 CD82P27701 267 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 FDFT1P37268 417 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 CAPZBP47756 277 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 LEPRP48357 1165 aaKnown RBP6.37□□□□□ -1.39
KDM3B-208ENST00000512928 ARL4DP49703 201 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 VPS41P49754 854 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 CDKN1CP49918 316 aaPredicted RBP6.37□□□□□ -1.39
KDM3B-208ENST00000512928 ATP1A2P50993 1020 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 RAB15P59190 212 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 XIAPP98170 497 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 CACNG1Q06432 222 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 SRSF6Q13247 344 aaKnown RBP6.37□□□□□ -1.39
KDM3B-208ENST00000512928 BRD3Q15059 726 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 TRIP13Q15645 432 aaPredicted RBP6.37□□□□□ -1.39
KDM3B-208ENST00000512928 OASLQ15646 514 aaKnown RBP6.37□□□□□ -1.39
KDM3B-208ENST00000512928 RPE65Q16518 533 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 SKIDA1Q1XH10 827 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 GPR33Q49SQ1 333 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 SYTL3Q4VX76 610 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 CACHD1Q5VU97 1274 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 KIAA1614Q5VZ46 1190 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 KCTD11Q693B1 232 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 ARMC6Q6NXE6 501 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 ZNF449Q6P9G9 518 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 KLHL35Q6PF15 583 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 DRICH1Q6PGQ1 229 aaPredicted RBP6.37□□□□□ -1.39
KDM3B-208ENST00000512928 RBM12BQ8IXT5 1001 aaKnown RBP6.37□□□□□ -1.39
KDM3B-208ENST00000512928 CLDN19Q8N6F1 224 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 OTUD6BQ8N6M0 293 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 IL22RA1Q8N6P7 574 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 ZSCAN1Q8NBB4 408 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 PPHLN1Q8NEY8 458 aaKnown RBP6.37□□□□□ -1.39
KDM3B-208ENST00000512928 OR6P1Q8NGX9 317 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 OR2L2Q8NH16 312 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 HEXDCQ8WVB3 486 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 MAIP1Q8WWC4 291 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 RSC1A1Q92681 617 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.37□□□□□ -1.39
KDM3B-208ENST00000512928 RTP4Q96DX8 246 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 ZDHHC12Q96GR4 267 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 UBL7Q96S82 380 aaPredicted RBP6.37□□□□□ -1.39
KDM3B-208ENST00000512928 ASPSCR1Q9BZE9 553 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 VPS37BQ9H9H4 285 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 ARNT2Q9HBZ2 717 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 SLC40A1Q9NP59 571 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 NLE1Q9NVX2 485 aaPredicted RBP6.37□□□□□ -1.39
KDM3B-208ENST00000512928 ZDHHC3Q9NYG2 299 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 PAK5Q9P286 719 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 SNX12Q9UMY4 172 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 B3GALT1Q9Y5Z6 326 aa6.37□□□□□ -1.39
KDM3B-208ENST00000512928 MN1Q10571 1320 aaPredicted RBP6.36□□□□□ -1.39
KDM3B-208ENST00000512928 UBA6A0AVT1 1052 aaPredicted RBP6.36□□□□□ -1.39
KDM3B-208ENST00000512928 HEATR9A2RTY3 570 aa6.36□□□□□ -1.39
KDM3B-208ENST00000512928 CCDC162PA2VCL2 907 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms