RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 MRPS18BQ9Y676 258 aaKnown RBP12.3□□□□□ -0.44
VEGFA-216ENST00000512683 COLEC10Q9Y6Z7 277 aa12.3□□□□□ -0.44
VEGFA-216ENST00000512683 USP9YO00507 2555 aaPredicted RBP12.3□□□□□ -0.44
VEGFA-216ENST00000512683 IGHV5-51A0A0C4DH38 117 aa12.29□□□□□ -0.44
VEGFA-216ENST00000512683 UBA6A0AVT1 1052 aaPredicted RBP12.29□□□□□ -0.44
VEGFA-216ENST00000512683 CDC14CA4D256 554 aa12.29□□□□□ -0.44
VEGFA-216ENST00000512683 OR5K3A6NET4 321 aa12.29□□□□□ -0.44
VEGFA-216ENST00000512683 MGAT4DA6NG13 374 aa12.29□□□□□ -0.44
VEGFA-216ENST00000512683 TLCD2A6NGC4 264 aa12.29□□□□□ -0.44
VEGFA-216ENST00000512683 MATN2O00339 956 aa12.29□□□□□ -0.44
VEGFA-216ENST00000512683 PSTPIP1O43586 416 aa12.29□□□□□ -0.44
VEGFA-216ENST00000512683 KIF1CO43896 1103 aaKnown RBP12.29□□□□□ -0.44
VEGFA-216ENST00000512683 CST8O60676 142 aa12.29□□□□□ -0.44
VEGFA-216ENST00000512683 VPS4BO75351 444 aa12.29□□□□□ -0.44
VEGFA-216ENST00000512683 MTX2O75431 263 aa12.29□□□□□ -0.44
VEGFA-216ENST00000512683 PMPCBO75439 489 aa12.29□□□□□ -0.44
VEGFA-216ENST00000512683 ZBTB11O95625 1053 aaPredicted RBP12.29□□□□□ -0.44
VEGFA-216ENST00000512683 KLK3P07288 261 aaPredicted RBP12.29□□□□□ -0.44
VEGFA-216ENST00000512683 RAB40ALP0C0E4 278 aa12.29□□□□□ -0.44
VEGFA-216ENST00000512683 FOLR1P15328 257 aa12.29□□□□□ -0.44
VEGFA-216ENST00000512683 MARCKSL1P49006 195 aa12.29□□□□□ -0.44
VEGFA-216ENST00000512683 GSDMDP57764 484 aa12.29□□□□□ -0.44
VEGFA-216ENST00000512683 WASHC5Q12768 1159 aa12.29□□□□□ -0.44
VEGFA-216ENST00000512683 KHDC1Q4VXA5 237 aaKnown RBP12.29□□□□□ -0.44
VEGFA-216ENST00000512683 ATP1A1-AS1Q5TC04 95 aa12.29□□□□□ -0.44
VEGFA-216ENST00000512683 IZUMO3Q5VZ72 239 aa12.29□□□□□ -0.44
VEGFA-216ENST00000512683 TMEM220Q6QAJ8 160 aa12.29□□□□□ -0.44
VEGFA-216ENST00000512683 SPOCD1Q6ZMY3 1216 aa12.29□□□□□ -0.44
VEGFA-216ENST00000512683 ZNF517Q6ZMY9 492 aaPredicted RBP12.29□□□□□ -0.44
VEGFA-216ENST00000512683 FAM92BQ6ZTR7 304 aa12.29□□□□□ -0.44
VEGFA-216ENST00000512683 CCDC170Q8IYT3 715 aa12.29□□□□□ -0.44
VEGFA-216ENST00000512683 TTC30BQ8N4P2 665 aa12.29□□□□□ -0.44
VEGFA-216ENST00000512683 EFCAB3Q8N7B9 438 aa12.29□□□□□ -0.44
VEGFA-216ENST00000512683 CT55Q8WUE5 264 aa12.29□□□□□ -0.44
VEGFA-216ENST00000512683 HEXDCQ8WVB3 486 aa12.29□□□□□ -0.44
VEGFA-216ENST00000512683 LINC00615Q96LM1 132 aaPredicted RBP12.29□□□□□ -0.44
VEGFA-216ENST00000512683 CCM2Q9BSQ5 444 aa12.29□□□□□ -0.44
VEGFA-216ENST00000512683 HRASLS2Q9NWW9 162 aa12.29□□□□□ -0.44
VEGFA-216ENST00000512683 VPS4AQ9UN37 437 aa12.29□□□□□ -0.44
VEGFA-216ENST00000512683 G3BP2Q9UN86 482 aaKnown RBP12.29□□□□□ -0.44
VEGFA-216ENST00000512683 PLAAQ9Y263 795 aa12.29□□□□□ -0.44
VEGFA-216ENST00000512683 WDR37Q9Y2I8 494 aa12.29□□□□□ -0.44
VEGFA-216ENST00000512683 SPO11Q9Y5K1 396 aa12.29□□□□□ -0.44
VEGFA-216ENST00000512683 HEBP2Q9Y5Z4 205 aa12.29□□□□□ -0.44
VEGFA-216ENST00000512683 ZNF106Q9H2Y7 1883 aaKnown RBP12.29□□□□□ -0.44
VEGFA-216ENST00000512683 NOTCH2Q04721 2471 aa12.29□□□□□ -0.44
VEGFA-216ENST00000512683 GLYATL1P3A0A0U1RQE8 302 aa12.28□□□□□ -0.44
VEGFA-216ENST00000512683 RCCD1A6NED2 376 aa12.28□□□□□ -0.44
VEGFA-216ENST00000512683 HACD1B0YJ81 288 aa12.28□□□□□ -0.44
VEGFA-216ENST00000512683 AURKAO14965 403 aa12.28□□□□□ -0.44
VEGFA-216ENST00000512683 MAP3K7O43318 606 aa12.28□□□□□ -0.44
VEGFA-216ENST00000512683 CPNE3O75131 537 aaKnown RBP12.28□□□□□ -0.44
VEGFA-216ENST00000512683 FURINP09958 794 aa12.28□□□□□ -0.44
VEGFA-216ENST00000512683 MSL3P1P0C860 447 aa12.28□□□□□ -0.44
VEGFA-216ENST00000512683 MTHFD1P11586 935 aaKnown RBP12.28□□□□□ -0.44
VEGFA-216ENST00000512683 CD68P34810 354 aaPredicted RBP12.28□□□□□ -0.44
VEGFA-216ENST00000512683 ZNF75DP51815 510 aa12.28□□□□□ -0.44
VEGFA-216ENST00000512683 MPP3Q13368 585 aa12.28□□□□□ -0.44
VEGFA-216ENST00000512683 CHRNA6Q15825 494 aa12.28□□□□□ -0.44
VEGFA-216ENST00000512683 PPP2R5EQ16537 467 aa12.28□□□□□ -0.44
VEGFA-216ENST00000512683 PLA2G4EQ3MJ16 856 aa12.28□□□□□ -0.44
VEGFA-216ENST00000512683 TFDP3Q5H9I0 405 aa12.28□□□□□ -0.44
VEGFA-216ENST00000512683 DNTTIP2Q5QJE6 756 aaKnown RBP12.28□□□□□ -0.44
VEGFA-216ENST00000512683 KAZNQ674X7 775 aa12.28□□□□□ -0.44
VEGFA-216ENST00000512683 ARMC6Q6NXE6 501 aa12.28□□□□□ -0.44
VEGFA-216ENST00000512683 KDELC1Q6UW63 502 aa12.28□□□□□ -0.44
VEGFA-216ENST00000512683 OOSP2Q86WS3 158 aa12.28□□□□□ -0.44
VEGFA-216ENST00000512683 KATNAL2Q8IYT4 538 aa12.28□□□□□ -0.44
VEGFA-216ENST00000512683 RASGEF1AQ8N9B8 481 aa12.28□□□□□ -0.44
VEGFA-216ENST00000512683 ZNF398Q8TD17 642 aa12.28□□□□□ -0.44
VEGFA-216ENST00000512683 KRT35Q92764 455 aa12.28□□□□□ -0.44
VEGFA-216ENST00000512683 ELMO2Q96JJ3 720 aa12.28□□□□□ -0.44
VEGFA-216ENST00000512683 FERMT1Q9BQL6 677 aa12.28□□□□□ -0.44
VEGFA-216ENST00000512683 RBSNQ9H1K0 784 aa12.28□□□□□ -0.44
VEGFA-216ENST00000512683 ACTL8Q9H568 366 aa12.28□□□□□ -0.44
VEGFA-216ENST00000512683 LRRC4CQ9HCJ2 640 aa12.28□□□□□ -0.44
VEGFA-216ENST00000512683 BPIFA1Q9NP55 256 aa12.28□□□□□ -0.44
VEGFA-216ENST00000512683 RP1L1Q8IWN7 2480 aaPredicted RBP12.28□□□□□ -0.44
VEGFA-216ENST00000512683 hCG_1818297A0A087WSY0 165 aa12.27□□□□□ -0.45
VEGFA-216ENST00000512683 C17orf113A0A1B0GUU1 675 aa12.27□□□□□ -0.45
VEGFA-216ENST00000512683 C5orf60A6NFR6 353 aa12.27□□□□□ -0.45
VEGFA-216ENST00000512683 C2orf81A6NN90 581 aa12.27□□□□□ -0.45
VEGFA-216ENST00000512683 TTLL8A6PVC2 850 aa12.27□□□□□ -0.45
VEGFA-216ENST00000512683 STX7O15400 261 aaKnown RBP12.27□□□□□ -0.45
VEGFA-216ENST00000512683 KLHL41O60662 606 aa12.27□□□□□ -0.45
VEGFA-216ENST00000512683 ZNF189O75820 626 aaPredicted RBP12.27□□□□□ -0.45
VEGFA-216ENST00000512683 ZRANB2O95218 330 aaKnown RBP eCLIP12.27□□□□□ -0.45
VEGFA-216ENST00000512683 MSH3P20585 1137 aa12.27□□□□□ -0.45
VEGFA-216ENST00000512683 PGDP52209 483 aa12.27□□□□□ -0.45
VEGFA-216ENST00000512683 XRCC4Q13426 336 aa12.27□□□□□ -0.45
VEGFA-216ENST00000512683 PLCL1Q15111 1095 aa12.27□□□□□ -0.45
VEGFA-216ENST00000512683 SLC1A5Q15758 541 aa12.27□□□□□ -0.45
VEGFA-216ENST00000512683 SIRPB2Q5JXA9 342 aa12.27□□□□□ -0.45
VEGFA-216ENST00000512683 GPRC6AQ5T6X5 926 aa12.27□□□□□ -0.45
VEGFA-216ENST00000512683 FHL5Q5TD97 284 aa12.27□□□□□ -0.45
VEGFA-216ENST00000512683 C11orf63Q6NUN7 778 aa12.27□□□□□ -0.45
VEGFA-216ENST00000512683 PID1Q7Z2X4 250 aa12.27□□□□□ -0.45
VEGFA-216ENST00000512683 RCOR2Q8IZ40 523 aa12.27□□□□□ -0.45
VEGFA-216ENST00000512683 OR2L2Q8NH16 312 aa12.27□□□□□ -0.45
VEGFA-216ENST00000512683 P3H4Q92791 437 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms