RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 IL32P24001 234 aa8.83□□□□□ -1
VCAN-208ENST00000512590 RFC2P35250 354 aa8.83□□□□□ -1
VCAN-208ENST00000512590 FOLR3P41439 243 aa8.83□□□□□ -1
VCAN-208ENST00000512590 MAPK12P53778 367 aa8.83□□□□□ -1
VCAN-208ENST00000512590 RPL38P63173 70 aaKnown RBP8.83□□□□□ -1
VCAN-208ENST00000512590 PRKCDQ05655 676 aa8.83□□□□□ -1
VCAN-208ENST00000512590 RFX4Q33E94 735 aa8.83□□□□□ -1
VCAN-208ENST00000512590 C6orf141Q5SZD1 244 aa8.83□□□□□ -1
VCAN-208ENST00000512590 FUT10Q6P4F1 479 aa8.83□□□□□ -1
VCAN-208ENST00000512590 METTL16Q86W50 562 aaKnown RBP8.83□□□□□ -1
VCAN-208ENST00000512590 TCAIMQ8N3R3 496 aa8.83□□□□□ -1
VCAN-208ENST00000512590 ARL14EPQ8N8R7 260 aaPredicted RBP8.83□□□□□ -1
VCAN-208ENST00000512590 CAMKVQ8NCB2 501 aa8.83□□□□□ -1
VCAN-208ENST00000512590 RCBTB1Q8NDN9 531 aa8.83□□□□□ -1
VCAN-208ENST00000512590 RORBQ92753 470 aa8.83□□□□□ -1
VCAN-208ENST00000512590 MMABQ96EY8 250 aaPredicted RBP8.83□□□□□ -1
VCAN-208ENST00000512590 PSKH2Q96QS6 385 aa8.83□□□□□ -1
VCAN-208ENST00000512590 SLC39A3Q9BRY0 314 aa8.83□□□□□ -1
VCAN-208ENST00000512590 DNTTIP1Q9H147 329 aa8.83□□□□□ -1
VCAN-208ENST00000512590 LY9Q9HBG7 655 aa8.83□□□□□ -1
VCAN-208ENST00000512590 EHD3Q9NZN3 535 aa8.83□□□□□ -1
VCAN-208ENST00000512590 IL36AQ9UHA7 158 aa8.83□□□□□ -1
VCAN-208ENST00000512590 PCDHGB2Q9Y5G2 931 aa8.83□□□□□ -1
VCAN-208ENST00000512590 WDR27A2RRH5 827 aa8.83□□□□□ -1
VCAN-208ENST00000512590 TRUB2O95900 331 aaKnown RBP8.83□□□□□ -1
VCAN-208ENST00000512590 PRKAR1AP10644 381 aa8.83□□□□□ -1
VCAN-208ENST00000512590 ACP5P13686 325 aa8.83□□□□□ -1
VCAN-208ENST00000512590 MTHFD2P13995 350 aa8.83□□□□□ -1
VCAN-208ENST00000512590 HNRNPKP61978 463 aaKnown RBP eCLIP8.83□□□□□ -1
VCAN-208ENST00000512590 E2F2Q14209 437 aa8.83□□□□□ -1
VCAN-208ENST00000512590 DECR1Q16698 335 aa8.83□□□□□ -1
VCAN-208ENST00000512590 MOB2Q70IA6 237 aa8.83□□□□□ -1
VCAN-208ENST00000512590 HTR3CQ8WXA8 447 aa8.83□□□□□ -1
VCAN-208ENST00000512590 PANX1Q96RD7 426 aa8.83□□□□□ -1
VCAN-208ENST00000512590 PHB2Q99623 299 aa8.83□□□□□ -1
VCAN-208ENST00000512590 GPR174Q9BXC1 333 aa8.83□□□□□ -1
VCAN-208ENST00000512590 NOL6Q9H6R4 1146 aaKnown RBP8.83□□□□□ -1
VCAN-208ENST00000512590 PLEKHA6Q9Y2H5 1048 aa8.83□□□□□ -1
VCAN-208ENST00000512590 WBP11Q9Y2W2 641 aaKnown RBP8.83□□□□□ -1
VCAN-208ENST00000512590 F8VP50 259 aa8.83□□□□□ -1
VCAN-208ENST00000512590 TNFRSF21O75509 655 aa8.83□□□□□ -1
VCAN-208ENST00000512590 CRYZL1O95825 349 aa8.83□□□□□ -1
VCAN-208ENST00000512590 AGTP01019 485 aa8.83□□□□□ -1
VCAN-208ENST00000512590 SPAM1P38567 509 aa8.83□□□□□ -1
VCAN-208ENST00000512590 DGKQP52824 942 aa8.83□□□□□ -1
VCAN-208ENST00000512590 LAPTM4BQ86VI4 370 aa8.83□□□□□ -1
VCAN-208ENST00000512590 SLC41A1Q8IVJ1 513 aa8.83□□□□□ -1
VCAN-208ENST00000512590 ADHFE1Q8IWW8 467 aa8.83□□□□□ -1
VCAN-208ENST00000512590 IL17RCQ8NAC3 791 aa8.83□□□□□ -1
VCAN-208ENST00000512590 ZNF548Q8NEK5 533 aaPredicted RBP8.83□□□□□ -1
VCAN-208ENST00000512590 TRIM9Q9C026 710 aa8.83□□□□□ -1
VCAN-208ENST00000512590 SLC6A15Q9H2J7 730 aa8.83□□□□□ -1
VCAN-208ENST00000512590 KCNIP1Q9NZI2 227 aa8.83□□□□□ -1
VCAN-208ENST00000512590 CD207Q9UJ71 328 aa8.83□□□□□ -1
VCAN-208ENST00000512590 OR2AG2A6NM03 316 aa8.82□□□□□ -1
VCAN-208ENST00000512590 BTBD19C9JJ37 291 aa8.82□□□□□ -1
VCAN-208ENST00000512590 SEC14L5O43304 696 aa8.82□□□□□ -1
VCAN-208ENST00000512590 DNAJA2O60884 412 aa8.82□□□□□ -1
VCAN-208ENST00000512590 ZBTB48P10074 688 aaPredicted RBP8.82□□□□□ -1
VCAN-208ENST00000512590 MAP3K8P41279 467 aa8.82□□□□□ -1
VCAN-208ENST00000512590 C1QTNF8P60827 252 aa8.82□□□□□ -1
VCAN-208ENST00000512590 ITPRIPL2Q3MIP1 535 aa8.82□□□□□ -1
VCAN-208ENST00000512590 SLC39A4Q6P5W5 647 aa8.82□□□□□ -1
VCAN-208ENST00000512590 POLNQ7Z5Q5 900 aa8.82□□□□□ -1
VCAN-208ENST00000512590 NECAB3Q96P71 396 aaPredicted RBP8.82□□□□□ -1
VCAN-208ENST00000512590 CPNE1Q99829 537 aa8.82□□□□□ -1
VCAN-208ENST00000512590 LGR4Q9BXB1 951 aa8.82□□□□□ -1
VCAN-208ENST00000512590 FAM105AQ9NUU6 356 aa8.82□□□□□ -1
VCAN-208ENST00000512590 KBTBD4Q9NVX7 518 aa8.82□□□□□ -1
VCAN-208ENST00000512590 MORF4L1Q9UBU8 362 aa8.82□□□□□ -1
VCAN-208ENST00000512590 SLC7A11Q9UPY5 501 aa8.82□□□□□ -1
VCAN-208ENST00000512590 ZNF175Q9Y473 711 aa8.82□□□□□ -1
VCAN-208ENST00000512590 PLSCR5A0PG75 271 aa8.82□□□□□ -1
VCAN-208ENST00000512590 HACD1B0YJ81 288 aa8.82□□□□□ -1
VCAN-208ENST00000512590 WNT10BO00744 389 aa8.82□□□□□ -1
VCAN-208ENST00000512590 PAPSS2O95340 614 aaPredicted RBP8.82□□□□□ -1
VCAN-208ENST00000512590 MAPTP10636 758 aaKnown RBP8.82□□□□□ -1
VCAN-208ENST00000512590 GNB2P62879 340 aa8.82□□□□□ -1
VCAN-208ENST00000512590 CXorf57Q6NSI4 855 aaKnown RBP8.82□□□□□ -1
VCAN-208ENST00000512590 TMEM220Q6QAJ8 160 aa8.82□□□□□ -1
VCAN-208ENST00000512590 SLC36A4Q6YBV0 504 aa8.82□□□□□ -1
VCAN-208ENST00000512590 ZC3HC1Q86WB0 502 aaKnown RBP8.82□□□□□ -1
VCAN-208ENST00000512590 CMTR2Q8IYT2 770 aaKnown RBP8.82□□□□□ -1
VCAN-208ENST00000512590 MGME1Q9BQP7 344 aa8.82□□□□□ -1
VCAN-208ENST00000512590 ZNF471Q9BX82 626 aaPredicted RBP8.82□□□□□ -1
VCAN-208ENST00000512590 POLR3BQ9NW08 1133 aaPredicted RBP8.82□□□□□ -1
VCAN-208ENST00000512590 ACKR2O00590 384 aa8.82□□□□□ -1
VCAN-208ENST00000512590 LDLRP01130 860 aa8.82□□□□□ -1
VCAN-208ENST00000512590 POU2F2P09086 479 aa8.82□□□□□ -1
VCAN-208ENST00000512590 DYRK1AQ13627 763 aa8.82□□□□□ -1
VCAN-208ENST00000512590 PDE7AQ13946 482 aa8.82□□□□□ -1
VCAN-208ENST00000512590 GRIK5Q16478 980 aa8.82□□□□□ -1
VCAN-208ENST00000512590 CPTPQ5TA50 214 aa8.82□□□□□ -1
VCAN-208ENST00000512590 TMEM225Q6GV28 225 aa8.82□□□□□ -1
VCAN-208ENST00000512590 ZNF627Q7L945 461 aa8.82□□□□□ -1
VCAN-208ENST00000512590 ARPINQ7Z6K5 226 aa8.82□□□□□ -1
VCAN-208ENST00000512590 ADAMTSL2Q86TH1 951 aa8.82□□□□□ -1
VCAN-208ENST00000512590 HIPK1Q86Z02 1210 aa8.82□□□□□ -1
VCAN-208ENST00000512590 ZNF101Q8IZC7 436 aa8.82□□□□□ -1
VCAN-208ENST00000512590 ZNF276Q8N554 614 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms