RNA–Protein interactions for RNA: ENST00000512336.5

DDR1-267, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-267	ENST00000512336	DIDO1	Q9BTC0	2240 aa	Known RBP	11.93	□□□□□ -0.5
DDR1-267	ENST00000512336	RGSL1	A5PLK6	1076 aa		11.93	□□□□□ -0.5
DDR1-267	ENST00000512336	TLCD2	A6NGC4	264 aa		11.93	□□□□□ -0.5
DDR1-267	ENST00000512336	MTX2	O75431	263 aa		11.93	□□□□□ -0.5
DDR1-267	ENST00000512336	RNF8	O76064	485 aa		11.93	□□□□□ -0.5
DDR1-267	ENST00000512336	IPO7	O95373	1038 aa	Known RBP	11.93	□□□□□ -0.5
DDR1-267	ENST00000512336	GYPC	P04921	128 aa		11.93	□□□□□ -0.5
DDR1-267	ENST00000512336	CAPN1	P07384	714 aa		11.93	□□□□□ -0.5
DDR1-267	ENST00000512336	CA5A	P35218	305 aa		11.93	□□□□□ -0.5
DDR1-267	ENST00000512336	ARL4A	P40617	200 aa		11.93	□□□□□ -0.5
DDR1-267	ENST00000512336	HSD11B2	P80365	405 aa		11.93	□□□□□ -0.5
DDR1-267	ENST00000512336	ANKRD20A8P	Q5CZ79	823 aa		11.93	□□□□□ -0.5
DDR1-267	ENST00000512336	AGAP9	Q5VTM2	703 aa		11.93	□□□□□ -0.5
DDR1-267	ENST00000512336	ALS2CL	Q60I27	953 aa		11.93	□□□□□ -0.5
DDR1-267	ENST00000512336	HGSNAT	Q68CP4	663 aa		11.93	□□□□□ -0.5
DDR1-267	ENST00000512336	ACAD10	Q6JQN1	1059 aa		11.93	□□□□□ -0.5
DDR1-267	ENST00000512336	FAM198B	Q6UWH4	519 aa		11.93	□□□□□ -0.5
DDR1-267	ENST00000512336	WASH2P	Q6VEQ5	465 aa		11.93	□□□□□ -0.5
DDR1-267	ENST00000512336	CUZD1	Q86UP6	607 aa		11.93	□□□□□ -0.5
DDR1-267	ENST00000512336	KMT5C	Q86Y97	462 aa		11.93	□□□□□ -0.5
DDR1-267	ENST00000512336	ZNF547	Q8IVP9	402 aa		11.93	□□□□□ -0.5
DDR1-267	ENST00000512336	D2HGDH	Q8N465	521 aa		11.93	□□□□□ -0.5
DDR1-267	ENST00000512336	GPR150	Q8NGU9	434 aa		11.93	□□□□□ -0.5
DDR1-267	ENST00000512336	CCHCR1	Q8TD31	782 aa		11.93	□□□□□ -0.5
DDR1-267	ENST00000512336	LRFN5	Q96NI6	719 aa		11.93	□□□□□ -0.5
DDR1-267	ENST00000512336	SPATA16	Q9BXB7	569 aa		11.93	□□□□□ -0.5
DDR1-267	ENST00000512336	PCDH9	Q9HC56	1237 aa		11.93	□□□□□ -0.5
DDR1-267	ENST00000512336	ABHD10	Q9NUJ1	306 aa		11.93	□□□□□ -0.5
DDR1-267	ENST00000512336	TAS2R14	Q9NYV8	317 aa		11.93	□□□□□ -0.5
DDR1-267	ENST00000512336	TTLL3	Q9Y4R7	772 aa		11.93	□□□□□ -0.5
DDR1-267	ENST00000512336	PCDHGA10	Q9Y5H3	936 aa		11.93	□□□□□ -0.5
DDR1-267	ENST00000512336	UBA6	A0AVT1	1052 aa	Predicted RBP	11.92	□□□□□ -0.5
DDR1-267	ENST00000512336	USP27X	A6NNY8	438 aa		11.92	□□□□□ -0.5
DDR1-267	ENST00000512336	GPR89A	B7ZAQ6	455 aa		11.92	□□□□□ -0.5
DDR1-267	ENST00000512336	E2F3	O00716	465 aa		11.92	□□□□□ -0.5
DDR1-267	ENST00000512336	DDX3Y	O15523	660 aa	Known RBP	11.92	□□□□□ -0.5
DDR1-267	ENST00000512336	CTIF	O43310	598 aa	Known RBP	11.92	□□□□□ -0.5
DDR1-267	ENST00000512336	GPR89B	P0CG08	455 aa		11.92	□□□□□ -0.5
DDR1-267	ENST00000512336	IDS	P22304	550 aa		11.92	□□□□□ -0.5
DDR1-267	ENST00000512336	OTX2	P32243	289 aa		11.92	□□□□□ -0.5
DDR1-267	ENST00000512336	RORA	P35398	523 aa		11.92	□□□□□ -0.5
DDR1-267	ENST00000512336	CYLC1	P35663	651 aa	Predicted RBP	11.92	□□□□□ -0.5
DDR1-267	ENST00000512336	ZBED6	P86452	979 aa		11.92	□□□□□ -0.5
DDR1-267	ENST00000512336	LLGL1	Q15334	1064 aa		11.92	□□□□□ -0.5
DDR1-267	ENST00000512336	DPYSL2	Q16555	572 aa		11.92	□□□□□ -0.5
DDR1-267	ENST00000512336	QPCT	Q16769	361 aa		11.92	□□□□□ -0.5
DDR1-267	ENST00000512336	SMTNL2	Q2TAL5	461 aa		11.92	□□□□□ -0.5
DDR1-267	ENST00000512336	KRTAP21-3	Q3LHN1	58 aa		11.92	□□□□□ -0.5
DDR1-267	ENST00000512336	PLEKHA7	Q6IQ23	1121 aa		11.92	□□□□□ -0.5
DDR1-267	ENST00000512336		Q6ZS92	163 aa		11.92	□□□□□ -0.5
DDR1-267	ENST00000512336	POLN	Q7Z5Q5	900 aa		11.92	□□□□□ -0.5
DDR1-267	ENST00000512336	CCDC170	Q8IYT3	715 aa		11.92	□□□□□ -0.5
DDR1-267	ENST00000512336	OR8K5	Q8NH50	307 aa		11.92	□□□□□ -0.5
DDR1-267	ENST00000512336	CPT1B	Q92523	772 aa		11.92	□□□□□ -0.5
DDR1-267	ENST00000512336	ZNF592	Q92610	1267 aa		11.92	□□□□□ -0.5
DDR1-267	ENST00000512336	GLYATL1	Q969I3	302 aa		11.92	□□□□□ -0.5
DDR1-267	ENST00000512336	CSPG4P5	Q96PW8	444 aa		11.92	□□□□□ -0.5
DDR1-267	ENST00000512336	CD180	Q99467	661 aa		11.92	□□□□□ -0.5
DDR1-267	ENST00000512336	RUBCNL	Q9H714	662 aa		11.92	□□□□□ -0.5
DDR1-267	ENST00000512336	AGPAT4	Q9NRZ5	378 aa		11.92	□□□□□ -0.5
DDR1-267	ENST00000512336	PARVA	Q9NVD7	372 aa		11.92	□□□□□ -0.5
DDR1-267	ENST00000512336	ITGB1BP2	Q9UKP3	347 aa		11.92	□□□□□ -0.5
DDR1-267	ENST00000512336	HEATR9	A2RTY3	570 aa		11.91	□□□□□ -0.5
DDR1-267	ENST00000512336	OR5K3	A6NET4	321 aa		11.91	□□□□□ -0.5
DDR1-267	ENST00000512336	TMEM191C	A6NGB0	347 aa		11.91	□□□□□ -0.5
DDR1-267	ENST00000512336	TMCO5B	A8MYB1	307 aa		11.91	□□□□□ -0.5
DDR1-267	ENST00000512336	KIF5C	O60282	957 aa		11.91	□□□□□ -0.5
DDR1-267	ENST00000512336	ALPP	P05187	535 aa		11.91	□□□□□ -0.5
DDR1-267	ENST00000512336	CA4	P22748	312 aa		11.91	□□□□□ -0.5
DDR1-267	ENST00000512336	ITGA3	P26006	1051 aa		11.91	□□□□□ -0.5
DDR1-267	ENST00000512336	IL1R2	P27930	398 aa		11.91	□□□□□ -0.5
DDR1-267	ENST00000512336	SERPINB6	P35237	376 aa		11.91	□□□□□ -0.5
DDR1-267	ENST00000512336	HAL	P42357	657 aa		11.91	□□□□□ -0.5
DDR1-267	ENST00000512336	RPL26	P61254	145 aa	Known RBP	11.91	□□□□□ -0.5
DDR1-267	ENST00000512336	NIPAL4	Q0D2K0	466 aa		11.91	□□□□□ -0.5
DDR1-267	ENST00000512336	ABR	Q12979	859 aa		11.91	□□□□□ -0.5
DDR1-267	ENST00000512336	MYBPC3	Q14896	1274 aa		11.91	□□□□□ -0.5
DDR1-267	ENST00000512336	NCF4	Q15080	339 aa		11.91	□□□□□ -0.5
DDR1-267	ENST00000512336	PLCL1	Q15111	1095 aa		11.91	□□□□□ -0.5
DDR1-267	ENST00000512336	KHDC1	Q4VXA5	237 aa	Known RBP	11.91	□□□□□ -0.5
DDR1-267	ENST00000512336	ALG1L	Q6GMV1	187 aa		11.91	□□□□□ -0.5
DDR1-267	ENST00000512336	KLHL35	Q6PF15	583 aa		11.91	□□□□□ -0.5
DDR1-267	ENST00000512336	FBXO38	Q6PIJ6	1188 aa		11.91	□□□□□ -0.5
DDR1-267	ENST00000512336	IGFL3	Q6UXB1	125 aa		11.91	□□□□□ -0.5
DDR1-267	ENST00000512336	MRGPRE	Q86SM8	312 aa		11.91	□□□□□ -0.5
DDR1-267	ENST00000512336	KCNMB4	Q86W47	210 aa		11.91	□□□□□ -0.5
DDR1-267	ENST00000512336	RAB43	Q86YS6	212 aa		11.91	□□□□□ -0.5
DDR1-267	ENST00000512336	REXO1L1P	Q8IX06	675 aa		11.91	□□□□□ -0.5
DDR1-267	ENST00000512336	SYTL1	Q8IYJ3	562 aa		11.91	□□□□□ -0.5
DDR1-267	ENST00000512336	GALNT16	Q8N428	558 aa		11.91	□□□□□ -0.5
DDR1-267	ENST00000512336	GPR26	Q8NDV2	337 aa		11.91	□□□□□ -0.5
DDR1-267	ENST00000512336	ARRDC2	Q8TBH0	407 aa		11.91	□□□□□ -0.5
DDR1-267	ENST00000512336	HSPH1	Q92598	858 aa		11.91	□□□□□ -0.5
DDR1-267	ENST00000512336	ZNF653	Q96CK0	615 aa		11.91	□□□□□ -0.5
DDR1-267	ENST00000512336	EID2B	Q96D98	161 aa		11.91	□□□□□ -0.5
DDR1-267	ENST00000512336	CLIP3	Q96DZ5	547 aa		11.91	□□□□□ -0.5
DDR1-267	ENST00000512336	LURAP1	Q96LR2	239 aa		11.91	□□□□□ -0.5
DDR1-267	ENST00000512336	PPM1M	Q96MI6	270 aa		11.91	□□□□□ -0.5
DDR1-267	ENST00000512336	DNAJC7	Q99615	494 aa		11.91	□□□□□ -0.5
DDR1-267	ENST00000512336	ZNF552	Q9H707	407 aa	Predicted RBP	11.91	□□□□□ -0.5

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