RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 ZNF648Q5T619 568 aaPredicted RBP11.28□□□□□ -0.6
RNF4-216ENST00000511859 ALG1LQ6GMV1 187 aa11.28□□□□□ -0.6
RNF4-216ENST00000511859 SPOCD1Q6ZMY3 1216 aa11.28□□□□□ -0.6
RNF4-216ENST00000511859 MRGPREQ86SM8 312 aa11.28□□□□□ -0.6
RNF4-216ENST00000511859 NXPE1Q8N323 547 aa11.28□□□□□ -0.6
RNF4-216ENST00000511859 PPP4R1Q8TF05 950 aa11.28□□□□□ -0.6
RNF4-216ENST00000511859 GLYATL1Q969I3 302 aa11.28□□□□□ -0.6
RNF4-216ENST00000511859 PEBP4Q96S96 227 aa11.28□□□□□ -0.6
RNF4-216ENST00000511859 GANQ9H2C0 597 aa11.28□□□□□ -0.6
RNF4-216ENST00000511859 ACTR5Q9H9F9 607 aaPredicted RBP11.28□□□□□ -0.6
RNF4-216ENST00000511859 PCDH9Q9HC56 1237 aa11.28□□□□□ -0.6
RNF4-216ENST00000511859 ATP13A2Q9NQ11 1180 aa11.28□□□□□ -0.6
RNF4-216ENST00000511859 RAD18Q9NS91 495 aa11.28□□□□□ -0.6
RNF4-216ENST00000511859 TRIM10Q9UDY6 481 aa11.28□□□□□ -0.6
RNF4-216ENST00000511859 SERTAD3Q9UJW9 196 aa11.28□□□□□ -0.6
RNF4-216ENST00000511859 PCSK5Q92824 1860 aa11.28□□□□□ -0.6
RNF4-216ENST00000511859 OR5K3A6NET4 321 aa11.28□□□□□ -0.6
RNF4-216ENST00000511859 H3BRJ5 948 aa11.28□□□□□ -0.6
RNF4-216ENST00000511859 KLF7O75840 302 aaPredicted RBP11.28□□□□□ -0.6
RNF4-216ENST00000511859 HBQ1P09105 142 aa11.28□□□□□ -0.6
RNF4-216ENST00000511859 MSL3P1P0C860 447 aa11.28□□□□□ -0.6
RNF4-216ENST00000511859 AMPD1P23109 780 aa11.28□□□□□ -0.6
RNF4-216ENST00000511859 IL4RP24394 825 aa11.28□□□□□ -0.6
RNF4-216ENST00000511859 HTR1EP28566 365 aa11.28□□□□□ -0.6
RNF4-216ENST00000511859 MIPP30301 263 aa11.28□□□□□ -0.6
RNF4-216ENST00000511859 SSTR2P30874 369 aa11.28□□□□□ -0.6
RNF4-216ENST00000511859 SERPINB6P35237 376 aa11.28□□□□□ -0.6
RNF4-216ENST00000511859 DCDC1P59894 354 aa11.28□□□□□ -0.6
RNF4-216ENST00000511859 POLR2FP61218 127 aaKnown RBP11.28□□□□□ -0.6
RNF4-216ENST00000511859 MAMLD1Q13495 774 aa11.28□□□□□ -0.6
RNF4-216ENST00000511859 PRAMEF17Q5VTA0 474 aa11.28□□□□□ -0.6
RNF4-216ENST00000511859 B3GNTL1Q67FW5 361 aaPredicted RBP11.28□□□□□ -0.6
RNF4-216ENST00000511859 BNC2Q6ZN30 1099 aaPredicted RBP11.28□□□□□ -0.6
RNF4-216ENST00000511859 OOSP2Q86WS3 158 aa11.28□□□□□ -0.6
RNF4-216ENST00000511859 ZNF547Q8IVP9 402 aa11.28□□□□□ -0.6
RNF4-216ENST00000511859 MCOLN2Q8IZK6 566 aa11.28□□□□□ -0.6
RNF4-216ENST00000511859 TRAM1L1Q8N609 369 aa11.28□□□□□ -0.6
RNF4-216ENST00000511859 DNAJB14Q8TBM8 379 aa11.28□□□□□ -0.6
RNF4-216ENST00000511859 ZFPM2Q8WW38 1151 aa11.28□□□□□ -0.6
RNF4-216ENST00000511859 ITLN2Q8WWU7 325 aaPredicted RBP11.28□□□□□ -0.6
RNF4-216ENST00000511859 TRAPPC9Q96Q05 1148 aa11.28□□□□□ -0.6
RNF4-216ENST00000511859 SLC7A5P2Q9GIP4 190 aa11.28□□□□□ -0.6
RNF4-216ENST00000511859 TSPY26PQ9H489 355 aa11.28□□□□□ -0.6
RNF4-216ENST00000511859 ZBTB20Q9HC78 741 aaPredicted RBP11.28□□□□□ -0.6
RNF4-216ENST00000511859 SEPT11Q9NVA2 429 aaKnown RBP11.28□□□□□ -0.6
RNF4-216ENST00000511859 PARVAQ9NVD7 372 aa11.28□□□□□ -0.6
RNF4-216ENST00000511859 SOHLH2Q9NX45 425 aa11.28□□□□□ -0.6
RNF4-216ENST00000511859 AMACRQ9UHK6 382 aa11.28□□□□□ -0.6
RNF4-216ENST00000511859 NOVA2Q9UNW9 492 aaKnown RBP11.28□□□□□ -0.6
RNF4-216ENST00000511859 WDR37Q9Y2I8 494 aa11.28□□□□□ -0.6
RNF4-216ENST00000511859 PCM1Q15154 2024 aa11.27□□□□□ -0.6
RNF4-216ENST00000511859 CYP2A7P20853 494 aa11.27□□□□□ -0.61
RNF4-216ENST00000511859 ZNF165P49910 485 aa11.27□□□□□ -0.61
RNF4-216ENST00000511859 ABRQ12979 859 aa11.27□□□□□ -0.61
RNF4-216ENST00000511859 IHHQ14623 411 aa11.27□□□□□ -0.61
RNF4-216ENST00000511859 DPYSL2Q16555 572 aa11.27□□□□□ -0.61
RNF4-216ENST00000511859 ACAD10Q6JQN1 1059 aa11.27□□□□□ -0.61
RNF4-216ENST00000511859 ARMC6Q6NXE6 501 aa11.27□□□□□ -0.61
RNF4-216ENST00000511859 MTFR2Q6P444 385 aa11.27□□□□□ -0.61
RNF4-216ENST00000511859 IGFL2Q6UWQ7 119 aa11.27□□□□□ -0.61
RNF4-216ENST00000511859 CYP4V2Q6ZWL3 525 aaPredicted RBP11.27□□□□□ -0.61
RNF4-216ENST00000511859 POLNQ7Z5Q5 900 aa11.27□□□□□ -0.61
RNF4-216ENST00000511859 C11orf96Q7Z7L8 435 aa11.27□□□□□ -0.61
RNF4-216ENST00000511859 MRGPRGQ86SM5 289 aa11.27□□□□□ -0.61
RNF4-216ENST00000511859 TTC30BQ8N4P2 665 aa11.27□□□□□ -0.61
RNF4-216ENST00000511859 ZNF808Q8N4W9 903 aaPredicted RBP11.27□□□□□ -0.61
RNF4-216ENST00000511859 LPCAT1Q8NF37 534 aa11.27□□□□□ -0.61
RNF4-216ENST00000511859 TEKT4Q8WW24 435 aa11.27□□□□□ -0.61
RNF4-216ENST00000511859 SLX1AQ9BQ83 275 aa11.27□□□□□ -0.61
RNF4-216ENST00000511859 NUP85Q9BW27 656 aa11.27□□□□□ -0.61
RNF4-216ENST00000511859 TRIM8Q9BZR9 551 aa11.27□□□□□ -0.61
RNF4-216ENST00000511859 ZFYVE1Q9HBF4 777 aa11.27□□□□□ -0.61
RNF4-216ENST00000511859 NLRC4Q9NPP4 1024 aa11.27□□□□□ -0.61
RNF4-216ENST00000511859 C1GALT1Q9NS00 363 aa11.27□□□□□ -0.61
RNF4-216ENST00000511859 SAMSN1Q9NSI8 373 aaKnown RBP11.27□□□□□ -0.61
RNF4-216ENST00000511859 ETNK2Q9NVF9 386 aa11.27□□□□□ -0.61
RNF4-216ENST00000511859 P4HTMQ9NXG6 502 aa11.27□□□□□ -0.61
RNF4-216ENST00000511859 DTLQ9NZJ0 730 aa11.27□□□□□ -0.61
RNF4-216ENST00000511859 SUCOQ9UBS9 1254 aaKnown RBP11.27□□□□□ -0.61
RNF4-216ENST00000511859 ZNF469Q96JG9 3925 aaPredicted RBP11.27□□□□□ -0.61
RNF4-216ENST00000511859 CACNA1CQ13936 2221 aa11.26□□□□□ -0.61
RNF4-216ENST00000511859 MAP1AP78559 2803 aaPredicted RBP11.26□□□□□ -0.61
RNF4-216ENST00000511859 SLC9B1P1A6NJY1 282 aa11.26□□□□□ -0.61
RNF4-216ENST00000511859 MAP3K7O43318 606 aa11.26□□□□□ -0.61
RNF4-216ENST00000511859 LDB2O43679 373 aa11.26□□□□□ -0.61
RNF4-216ENST00000511859 JRKO75564 520 aa11.26□□□□□ -0.61
RNF4-216ENST00000511859 SNRPB2P08579 225 aaKnown RBP11.26□□□□□ -0.61
RNF4-216ENST00000511859 OTUD4Q01804 1114 aaKnown RBP11.26□□□□□ -0.61
RNF4-216ENST00000511859 DSC2Q02487 901 aa11.26□□□□□ -0.61
RNF4-216ENST00000511859 TMEM115Q12893 351 aaPredicted RBP11.26□□□□□ -0.61
RNF4-216ENST00000511859 CDC16Q13042 620 aa11.26□□□□□ -0.61
RNF4-216ENST00000511859 AIMP2Q13155 320 aaKnown RBP11.26□□□□□ -0.61
RNF4-216ENST00000511859 ZNF169Q14929 603 aaPredicted RBP11.26□□□□□ -0.61
RNF4-216ENST00000511859 RPE65Q16518 533 aa11.26□□□□□ -0.61
RNF4-216ENST00000511859 QPCTQ16769 361 aa11.26□□□□□ -0.61
RNF4-216ENST00000511859 PTCHD3Q3KNS1 767 aa11.26□□□□□ -0.61
RNF4-216ENST00000511859 BOLA3Q53S33 107 aa11.26□□□□□ -0.61
RNF4-216ENST00000511859 PPP1R2P3Q6NXS1 205 aa11.26□□□□□ -0.61
RNF4-216ENST00000511859 RPUSD3Q6P087 351 aaKnown RBP11.26□□□□□ -0.61
RNF4-216ENST00000511859 FAM180AQ6UWF9 173 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms