RNA–Protein interactions for RNA: ENST00000511454.5

EXOSC9-210, Transcript of exosome component 9, humanhuman

TSL 5

Gene EXOSC9, Length 733 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-210ENST00000511454 PKP3Q9Y446 797 aa12.13□□□□□ -0.47
EXOSC9-210ENST00000511454 PCDHA3Q9Y5H8 950 aa12.13□□□□□ -0.47
EXOSC9-210ENST00000511454 CFAP20Q9Y6A4 193 aaKnown RBP12.13□□□□□ -0.47
EXOSC9-210ENST00000511454 RPS6KL1Q9Y6S9 549 aa12.13□□□□□ -0.47
EXOSC9-210ENST00000511454 CCL22O00626 93 aa12.12□□□□□ -0.47
EXOSC9-210ENST00000511454 FURINP09958 794 aa12.12□□□□□ -0.47
EXOSC9-210ENST00000511454 SPTBP11277 2137 aa12.12□□□□□ -0.47
EXOSC9-210ENST00000511454 SFTPCP11686 197 aa12.12□□□□□ -0.47
EXOSC9-210ENST00000511454 FGF5P12034 268 aa12.12□□□□□ -0.47
EXOSC9-210ENST00000511454 NELFEP18615 380 aaKnown RBP12.12□□□□□ -0.47
EXOSC9-210ENST00000511454 AKT1P31749 480 aa12.12□□□□□ -0.47
EXOSC9-210ENST00000511454 HALP42357 657 aa12.12□□□□□ -0.47
EXOSC9-210ENST00000511454 TNNT3P45378 269 aaPredicted RBP12.12□□□□□ -0.47
EXOSC9-210ENST00000511454 CCR10P46092 362 aa12.12□□□□□ -0.47
EXOSC9-210ENST00000511454 GEMP55040 296 aa12.12□□□□□ -0.47
EXOSC9-210ENST00000511454 XIAPP98170 497 aa12.12□□□□□ -0.47
EXOSC9-210ENST00000511454 KCNC4Q03721 635 aa12.12□□□□□ -0.47
EXOSC9-210ENST00000511454 ITGA9Q13797 1035 aa12.12□□□□□ -0.47
EXOSC9-210ENST00000511454 MAP7Q14244 749 aa12.12□□□□□ -0.47
EXOSC9-210ENST00000511454 SPA17Q15506 151 aa12.12□□□□□ -0.47
EXOSC9-210ENST00000511454 ANKRD20A2Q5SQ80 823 aa12.12□□□□□ -0.47
EXOSC9-210ENST00000511454 CCDC181Q5TID7 509 aa12.12□□□□□ -0.47
EXOSC9-210ENST00000511454 ANKRD20A1Q5TYW2 823 aa12.12□□□□□ -0.47
EXOSC9-210ENST00000511454 ANKRD20A3Q5VUR7 823 aa12.12□□□□□ -0.47
EXOSC9-210ENST00000511454 METRNLQ641Q3 311 aa12.12□□□□□ -0.47
EXOSC9-210ENST00000511454 DENND5AQ6IQ26 1287 aa12.12□□□□□ -0.47
EXOSC9-210ENST00000511454 C16orf46Q6P387 395 aa12.12□□□□□ -0.47
EXOSC9-210ENST00000511454 C6orf15Q6UXA7 325 aaPredicted RBP12.12□□□□□ -0.47
EXOSC9-210ENST00000511454 ATG14Q6ZNE5 492 aa12.12□□□□□ -0.47
EXOSC9-210ENST00000511454 RBM12BQ8IXT5 1001 aaKnown RBP12.12□□□□□ -0.47
EXOSC9-210ENST00000511454 LILRA3Q8N6C8 439 aaPredicted RBP12.12□□□□□ -0.47
EXOSC9-210ENST00000511454 CCDC110Q8TBZ0 833 aa12.12□□□□□ -0.47
EXOSC9-210ENST00000511454 ZNF398Q8TD17 642 aa12.12□□□□□ -0.47
EXOSC9-210ENST00000511454 ZDHHC12Q96GR4 267 aa12.12□□□□□ -0.47
EXOSC9-210ENST00000511454 INSM2Q96T92 566 aaPredicted RBP12.12□□□□□ -0.47
EXOSC9-210ENST00000511454 OSBPL8Q9BZF1 889 aa12.12□□□□□ -0.47
EXOSC9-210ENST00000511454 ZCCHC2Q9C0B9 1178 aaKnown RBP12.12□□□□□ -0.47
EXOSC9-210ENST00000511454 WWP1Q9H0M0 922 aa12.12□□□□□ -0.47
EXOSC9-210ENST00000511454 TRIT1Q9H3H1 467 aaKnown RBP12.12□□□□□ -0.47
EXOSC9-210ENST00000511454 IMP3Q9NV31 184 aaKnown RBP12.12□□□□□ -0.47
EXOSC9-210ENST00000511454 SEMA5BQ9P283 1151 aa12.12□□□□□ -0.47
EXOSC9-210ENST00000511454 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.12□□□□□ -0.47
EXOSC9-210ENST00000511454 EPN1Q9Y6I3 576 aaPredicted RBP12.12□□□□□ -0.47
EXOSC9-210ENST00000511454 SPTAN1Q13813 2472 aaKnown RBP12.11□□□□□ -0.47
EXOSC9-210ENST00000511454 KCNN4O15554 427 aa12.11□□□□□ -0.47
EXOSC9-210ENST00000511454 KCNJ13O60928 360 aa12.11□□□□□ -0.47
EXOSC9-210ENST00000511454 SPAG6O75602 509 aa12.11□□□□□ -0.47
EXOSC9-210ENST00000511454 ANXA9O76027 345 aa12.11□□□□□ -0.47
EXOSC9-210ENST00000511454 NDUFA10O95299 355 aa12.11□□□□□ -0.47
EXOSC9-210ENST00000511454 RBP3P10745 1247 aa12.11□□□□□ -0.47
EXOSC9-210ENST00000511454 PYGMP11217 842 aa12.11□□□□□ -0.47
EXOSC9-210ENST00000511454 MTHFD1P11586 935 aaKnown RBP12.11□□□□□ -0.47
EXOSC9-210ENST00000511454 FOLR1P15328 257 aa12.11□□□□□ -0.47
EXOSC9-210ENST00000511454 LPOP22079 712 aaPredicted RBP12.11□□□□□ -0.47
EXOSC9-210ENST00000511454 PTPN7P35236 360 aa12.11□□□□□ -0.47
EXOSC9-210ENST00000511454 CYLC1P35663 651 aaPredicted RBP12.11□□□□□ -0.47
EXOSC9-210ENST00000511454 DLSTP36957 453 aa12.11□□□□□ -0.47
EXOSC9-210ENST00000511454 CSRP3P50461 194 aa12.11□□□□□ -0.47
EXOSC9-210ENST00000511454 ZNF75DP51815 510 aa12.11□□□□□ -0.47
EXOSC9-210ENST00000511454 EIF3EP60228 445 aaKnown RBP12.11□□□□□ -0.47
EXOSC9-210ENST00000511454 COPS2P61201 443 aa12.11□□□□□ -0.47
EXOSC9-210ENST00000511454 SPARCL1Q14515 664 aa12.11□□□□□ -0.47
EXOSC9-210ENST00000511454 IL11RAQ14626 422 aa12.11□□□□□ -0.47
EXOSC9-210ENST00000511454 TAF1AQ15573 450 aaPredicted RBP12.11□□□□□ -0.47
EXOSC9-210ENST00000511454 LONRF2Q1L5Z9 754 aa12.11□□□□□ -0.47
EXOSC9-210ENST00000511454 SKIDA1Q1XH10 827 aa12.11□□□□□ -0.47
EXOSC9-210ENST00000511454 RAD9BQ6WBX8 426 aa12.11□□□□□ -0.47
EXOSC9-210ENST00000511454 TMEM135Q86UB9 458 aa12.11□□□□□ -0.47
EXOSC9-210ENST00000511454 RASGRP3Q8IV61 690 aa12.11□□□□□ -0.47
EXOSC9-210ENST00000511454 LRRC57Q8N9N7 239 aa12.11□□□□□ -0.47
EXOSC9-210ENST00000511454 OR13C4Q8NGS5 318 aa12.11□□□□□ -0.47
EXOSC9-210ENST00000511454 SLC41A2Q96JW4 573 aa12.11□□□□□ -0.47
EXOSC9-210ENST00000511454 RMDN2Q96LZ7 410 aa12.11□□□□□ -0.47
EXOSC9-210ENST00000511454 PPM1MQ96MI6 270 aa12.11□□□□□ -0.47
EXOSC9-210ENST00000511454 CATSPER2Q96P56 530 aa12.11□□□□□ -0.47
EXOSC9-210ENST00000511454 PANX2Q96RD6 677 aa12.11□□□□□ -0.47
EXOSC9-210ENST00000511454 NRTNQ99748 197 aa12.11□□□□□ -0.47
EXOSC9-210ENST00000511454 MAP3K3Q99759 626 aa12.11□□□□□ -0.47
EXOSC9-210ENST00000511454 RAB33BQ9H082 229 aa12.11□□□□□ -0.47
EXOSC9-210ENST00000511454 FAM96AQ9H5X1 160 aa12.11□□□□□ -0.47
EXOSC9-210ENST00000511454 ASB8Q9H765 288 aa12.11□□□□□ -0.47
EXOSC9-210ENST00000511454 AKIRIN1Q9H9L7 192 aaPredicted RBP12.11□□□□□ -0.47
EXOSC9-210ENST00000511454 ZNF71Q9NQZ8 489 aaPredicted RBP12.11□□□□□ -0.47
EXOSC9-210ENST00000511454 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.11□□□□□ -0.47
EXOSC9-210ENST00000511454 LNPEPQ9UIQ6 1025 aa12.11□□□□□ -0.47
EXOSC9-210ENST00000511454 DOPEY2Q9Y3R5 2298 aa12.11□□□□□ -0.47
EXOSC9-210ENST00000511454 A0A0U1RQJ8 604 aa12.1□□□□□ -0.47
EXOSC9-210ENST00000511454 GRID2IPA4D2P6 1211 aa12.1□□□□□ -0.47
EXOSC9-210ENST00000511454 GOLGA6L3A6NEY3 463 aa12.1□□□□□ -0.47
EXOSC9-210ENST00000511454 MGAT4DA6NG13 374 aa12.1□□□□□ -0.47
EXOSC9-210ENST00000511454 C2orf81A6NN90 581 aa12.1□□□□□ -0.47
EXOSC9-210ENST00000511454 SRP72O76094 671 aaKnown RBP12.1□□□□□ -0.47
EXOSC9-210ENST00000511454 EBLN1P0CF75 366 aa12.1□□□□□ -0.47
EXOSC9-210ENST00000511454 PRSS56P0CW18 603 aa12.1□□□□□ -0.47
EXOSC9-210ENST00000511454 TCN2P20062 427 aa12.1□□□□□ -0.47
EXOSC9-210ENST00000511454 MSH3P20585 1137 aa12.1□□□□□ -0.47
EXOSC9-210ENST00000511454 CTNNA2P26232 953 aa12.1□□□□□ -0.47
EXOSC9-210ENST00000511454 ARCN1P48444 511 aaKnown RBP12.1□□□□□ -0.47
EXOSC9-210ENST00000511454 ZNF140P52738 457 aaPredicted RBP12.1□□□□□ -0.47
EXOSC9-210ENST00000511454 TMPRSS15P98073 1019 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms