RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 MVB12BQ9H7P6 319 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 ADGRE2Q9UHX3 823 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 NR5A2O00482 541 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 DFNA5O60443 496 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 THRAP10827 490 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 ZNF8P17098 575 aaPredicted RBP5.06□□□□□ -1.6
PHF3-210ENST00000509876 SDHBP21912 280 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 GUCA1AP43080 201 aaPredicted RBP5.06□□□□□ -1.6
PHF3-210ENST00000509876 CYTH1Q15438 398 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 C1orf146Q5VVC0 180 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 LDB1Q86U70 411 aaPredicted RBP5.06□□□□□ -1.6
PHF3-210ENST00000509876 DCUN1D3Q8IWE4 304 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 PARP9Q8IXQ6 854 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 TDRD1Q9BXT4 1180 aaKnown RBP5.06□□□□□ -1.6
PHF3-210ENST00000509876 NEUROG2Q9H2A3 272 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 STOML1Q9UBI4 398 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 C19orf25Q9UFG5 118 aaPredicted RBP5.06□□□□□ -1.6
PHF3-210ENST00000509876 CORO2BQ9UQ03 480 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 K7ERQ8 282 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 FFAR3O14843 346 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 GPR42O15529 346 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 SLC1A2P43004 574 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 LIMK2P53671 638 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 CLNS1AP54105 237 aaKnown RBP5.06□□□□□ -1.6
PHF3-210ENST00000509876 PDK4Q16654 411 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 CYP1B1Q16678 543 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 DUOXA1Q1HG43 343 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 LIPMQ5VYY2 423 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 PATL1Q86TB9 770 aaKnown RBP5.06□□□□□ -1.6
PHF3-210ENST00000509876 SLC44A2Q8IWA5 706 aaPredicted RBP5.06□□□□□ -1.6
PHF3-210ENST00000509876 RBM12BQ8IXT5 1001 aaKnown RBP5.06□□□□□ -1.6
PHF3-210ENST00000509876 SMPDL3AQ92484 453 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 MFSD3Q96ES6 412 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 GFM1Q96RP9 751 aaKnown RBP5.06□□□□□ -1.6
PHF3-210ENST00000509876 IL1RL2Q9HB29 575 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 FZD3Q9NPG1 666 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 SEMA3GQ9NS98 782 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 SNX7Q9UNH6 387 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 AP3M1Q9Y2T2 418 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 MTF2Q9Y483 593 aaPredicted RBP5.06□□□□□ -1.6
PHF3-210ENST00000509876 A0A1B0GTW7 788 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 MUSKO15146 869 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 ERN1O75460 977 aaKnown RBP5.06□□□□□ -1.6
PHF3-210ENST00000509876 METTL18O95568 372 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 ITGB8P26012 769 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 CD38P28907 300 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 SERPINB1P30740 379 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 S100A3P33764 101 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 NME5P56597 212 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 CYP4F2P78329 520 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 LRIT3Q3SXY7 679 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 PLEKHS1Q5SXH7 462 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 CCNYL2Q5T2Q4 361 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 ANXA8L1Q5VT79 327 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 Q6ZVL8 140 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 PIWIL4Q7Z3Z4 852 aaKnown RBP5.06□□□□□ -1.6
PHF3-210ENST00000509876 NXPE1Q8N323 547 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 KIAA1958Q8N8K9 716 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 CHST14Q8NCH0 376 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 GSTCDQ8NEC7 633 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 PEX13Q92968 403 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 DNAAF2Q9NVR5 837 aaKnown RBP5.06□□□□□ -1.6
PHF3-210ENST00000509876 XPR1Q9UBH6 696 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 CDV3Q9UKY7 258 aaKnown RBP5.06□□□□□ -1.6
PHF3-210ENST00000509876 PCDHGB3Q9Y5G1 929 aa5.06□□□□□ -1.6
PHF3-210ENST00000509876 CCDC154A6NI56 674 aa5.05□□□□□ -1.6
PHF3-210ENST00000509876 TMEM150CB9EJG8 249 aa5.05□□□□□ -1.6
PHF3-210ENST00000509876 MTX2O75431 263 aa5.05□□□□□ -1.6
PHF3-210ENST00000509876 CYP7B1O75881 506 aa5.05□□□□□ -1.6
PHF3-210ENST00000509876 GLDCP23378 1020 aa5.05□□□□□ -1.6
PHF3-210ENST00000509876 SERPINB5P36952 375 aa5.05□□□□□ -1.6
PHF3-210ENST00000509876 CAPZA2P47755 286 aa5.05□□□□□ -1.6
PHF3-210ENST00000509876 AP2B1P63010 937 aa5.05□□□□□ -1.6
PHF3-210ENST00000509876 ZSCAN26Q16670 478 aa5.05□□□□□ -1.6
PHF3-210ENST00000509876 MINDY4Q4G0A6 757 aa5.05□□□□□ -1.6
PHF3-210ENST00000509876 PRMT9Q6P2P2 845 aa5.05□□□□□ -1.6
PHF3-210ENST00000509876 Q6ZSR6 202 aa5.05□□□□□ -1.6
PHF3-210ENST00000509876 USP30Q70CQ3 517 aa5.05□□□□□ -1.6
PHF3-210ENST00000509876 PLXDC1Q8IUK5 500 aa5.05□□□□□ -1.6
PHF3-210ENST00000509876 ADGRG2Q8IZP9 1017 aa5.05□□□□□ -1.6
PHF3-210ENST00000509876 ZNF248Q8NDW4 579 aa5.05□□□□□ -1.6
PHF3-210ENST00000509876 TFGQ92734 400 aaPredicted RBP5.05□□□□□ -1.6
PHF3-210ENST00000509876 TSACCQ96A04 125 aaPredicted RBP5.05□□□□□ -1.6
PHF3-210ENST00000509876 RANBP9Q96S59 729 aa5.05□□□□□ -1.6
PHF3-210ENST00000509876 CAB39LQ9H9S4 337 aa5.05□□□□□ -1.6
PHF3-210ENST00000509876 TRIM39Q9HCM9 518 aa5.05□□□□□ -1.6
PHF3-210ENST00000509876 BAIAP2L1Q9UHR4 511 aa5.05□□□□□ -1.6
PHF3-210ENST00000509876 PSME4Q14997 1843 aa5.05□□□□□ -1.6
PHF3-210ENST00000509876 AIM2O14862 343 aa5.05□□□□□ -1.6
PHF3-210ENST00000509876 BIRC5O15392 142 aa5.05□□□□□ -1.6
PHF3-210ENST00000509876 UBXN7O94888 489 aa5.05□□□□□ -1.6
PHF3-210ENST00000509876 PRAMEF12O95522 483 aa5.05□□□□□ -1.6
PHF3-210ENST00000509876 DCNP07585 359 aaKnown RBP5.05□□□□□ -1.6
PHF3-210ENST00000509876 MYCLP1P12525 358 aaPredicted RBP5.05□□□□□ -1.6
PHF3-210ENST00000509876 LBPP18428 481 aa5.05□□□□□ -1.6
PHF3-210ENST00000509876 SESN3P58005 492 aa5.05□□□□□ -1.6
PHF3-210ENST00000509876 SRP54P61011 504 aaKnown RBP5.05□□□□□ -1.6
PHF3-210ENST00000509876 MED21Q13503 144 aa5.05□□□□□ -1.6
PHF3-210ENST00000509876 SLC14A2Q15849 920 aa5.05□□□□□ -1.6
PHF3-210ENST00000509876 BROXQ5VW32 411 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms