RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 TMTC4Q5T4D3 741 aa10.88□□□□□ -0.67
SH3RF1-203ENST00000508685 HMBOX1Q6NT76 420 aa10.88□□□□□ -0.67
SH3RF1-203ENST00000508685 PSAPL1Q6NUJ1 521 aa10.88□□□□□ -0.67
SH3RF1-203ENST00000508685 AFTPHQ6ULP2 937 aa10.88□□□□□ -0.67
SH3RF1-203ENST00000508685 CYP2R1Q6VVX0 501 aa10.88□□□□□ -0.67
SH3RF1-203ENST00000508685 RPS27LQ71UM5 84 aaKnown RBP10.88□□□□□ -0.67
SH3RF1-203ENST00000508685 SLC15A3Q8IY34 581 aa10.88□□□□□ -0.67
SH3RF1-203ENST00000508685 LEMD2Q8NC56 503 aa10.88□□□□□ -0.67
SH3RF1-203ENST00000508685 FIBINQ8TAL6 211 aa10.88□□□□□ -0.67
SH3RF1-203ENST00000508685 STAG3L4Q8TBR4 150 aa10.88□□□□□ -0.67
SH3RF1-203ENST00000508685 ACDQ96AP0 544 aa10.88□□□□□ -0.67
SH3RF1-203ENST00000508685 SLC29A1Q99808 456 aa10.88□□□□□ -0.67
SH3RF1-203ENST00000508685 CIB1Q99828 191 aa10.88□□□□□ -0.67
SH3RF1-203ENST00000508685 TNFRSF12AQ9NP84 129 aa10.88□□□□□ -0.67
SH3RF1-203ENST00000508685 MID1IP1Q9NPA3 183 aa10.88□□□□□ -0.67
SH3RF1-203ENST00000508685 AGPAT4Q9NRZ5 378 aa10.88□□□□□ -0.67
SH3RF1-203ENST00000508685 INTS10Q9NVR2 710 aaKnown RBP10.88□□□□□ -0.67
SH3RF1-203ENST00000508685 DNAJC15Q9Y5T4 150 aa10.88□□□□□ -0.67
SH3RF1-203ENST00000508685 GRXCR2A6NFK2 248 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 NEDD8-MDP1E9PL57 170 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 OR1I1O60431 355 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 CDK14O94921 469 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 ALDOCP09972 364 aaKnown RBP10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 SLC5A2P31639 672 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 MC4RP32245 332 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 EPHA5P54756 1037 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 SH3BP2P78314 561 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 LRIT3Q3SXY7 679 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 FUT11Q495W5 492 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 ZBED5Q49AG3 693 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 DGKKQ5KSL6 1271 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 CLEC6AQ6EIG7 209 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 ASTLQ6HA08 431 aaPredicted RBP10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 TXNDC11Q6PKC3 985 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 DHRS4L2Q6PKH6 230 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 LAYNQ6UX15 382 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 CYHR1Q6ZMK1 362 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 LPCAT2Q7L5N7 544 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 LYSMD3Q7Z3D4 306 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 GPR141Q7Z602 305 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 RBM23Q86U06 439 aaKnown RBP10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 HOMEZQ8IX15 550 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 MYO1HQ8N1T3 1032 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 TTC30BQ8N4P2 665 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 PTGR2Q8N8N7 351 aaPredicted RBP10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 TRPV3Q8NET8 790 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 TWIST2Q8WVJ9 160 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 MYO19Q96H55 970 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 ZSWIM3Q96MP5 696 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 TDP1Q9NUW8 608 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 DUS2Q9NX74 493 aaKnown RBP10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 KIAA1522Q9P206 1035 aaPredicted RBP10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 MAP10Q9P2G4 905 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 FAM50BQ9Y247 325 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 VPS9D1Q9Y2B5 631 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 MED16Q9Y2X0 877 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 MTCL1Q9Y4B5 1905 aaKnown RBP10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 NOTCH4Q99466 2003 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 A0A1W2PP18 115 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 TRIM64A6NGJ6 449 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 ZNF839A8K0R7 811 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 NME4O00746 187 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 PFDN6O15212 129 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 STX7O15400 261 aaKnown RBP10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 BNIP3LO60238 219 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 CLASP2O75122 1294 aaKnown RBP10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 TIPRLO75663 272 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 PGLSO95336 258 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 CHEK2O96017 543 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 CYBBP04839 570 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 CDK4P11802 303 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 ZNF37AP17032 561 aaPredicted RBP10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 PTPN2P17706 415 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 FMO4P31512 558 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 KCNC1P48547 511 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 EEFSECP57772 596 aaKnown RBP10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 RAB15P59190 212 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 AP1S1P61966 158 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 LCP2Q13094 533 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 CBX2Q14781 532 aaPredicted RBP10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 GEN1Q17RS7 908 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 PITRM1Q5JRX3 1037 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 ARMC12Q5T9G4 340 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 ANKS6Q68DC2 871 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 TTC33Q6PID6 262 aaPredicted RBP10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 BLOC1S3Q6QNY0 202 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 SPRED1Q7Z699 444 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 GRASPQ7Z6J2 395 aaPredicted RBP10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 PTRH1Q86Y79 214 aaKnown RBP10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 TBC1D21Q8IYX1 336 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 ZNF420Q8TAQ5 688 aaPredicted RBP10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 PHOSPHO2Q8TCD6 241 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 PIH1D2Q8WWB5 315 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 MYLIPQ8WY64 445 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 ING5Q8WYH8 240 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 KIAA1191Q96A73 305 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 PTERQ96BW5 349 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 LRRC58Q96CX6 371 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 LMLNQ96KR4 655 aa10.87□□□□□ -0.67
SH3RF1-203ENST00000508685 C1QTNF3Q9BXJ4 246 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms