RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 CAPZBP47756 277 aa15.88■□□□□ 0.13
LMNA-222ENST00000508500 FNBP1LQ5T0N5 605 aa15.88■□□□□ 0.13
LMNA-222ENST00000508500 METRNLQ641Q3 311 aa15.88■□□□□ 0.13
LMNA-222ENST00000508500 DARS2Q6PI48 645 aaKnown RBP15.88■□□□□ 0.13
LMNA-222ENST00000508500 DET1Q7L5Y6 550 aa15.88■□□□□ 0.13
LMNA-222ENST00000508500 KLHL6Q8WZ60 621 aa15.88■□□□□ 0.13
LMNA-222ENST00000508500 CALR3Q96L12 384 aaKnown RBP15.88■□□□□ 0.13
LMNA-222ENST00000508500 INSM2Q96T92 566 aaPredicted RBP15.88■□□□□ 0.13
LMNA-222ENST00000508500 ZPBPQ9BS86 351 aa15.88■□□□□ 0.13
LMNA-222ENST00000508500 RAB33BQ9H082 229 aa15.88■□□□□ 0.13
LMNA-222ENST00000508500 ZNF768Q9H5H4 540 aaKnown RBP15.88■□□□□ 0.13
LMNA-222ENST00000508500 ASB8Q9H765 288 aa15.88■□□□□ 0.13
LMNA-222ENST00000508500 EPHA6Q9UF33 1036 aa15.88■□□□□ 0.13
LMNA-222ENST00000508500 IL17BQ9UHF5 180 aa15.88■□□□□ 0.13
LMNA-222ENST00000508500 C5orf60A6NFR6 353 aa15.87■□□□□ 0.13
LMNA-222ENST00000508500 TERTO14746 1132 aaKnown RBP15.87■□□□□ 0.13
LMNA-222ENST00000508500 TOX3O15405 576 aaPredicted RBP15.87■□□□□ 0.13
LMNA-222ENST00000508500 NKX2-8O15522 239 aa15.87■□□□□ 0.13
LMNA-222ENST00000508500 WISP1O95388 367 aa15.87■□□□□ 0.13
LMNA-222ENST00000508500 VCLP18206 1134 aa15.87■□□□□ 0.13
LMNA-222ENST00000508500 F8A1P23610 371 aa15.87■□□□□ 0.13
LMNA-222ENST00000508500 MAP4P27816 1152 aaKnown RBP15.87■□□□□ 0.13
LMNA-222ENST00000508500 TNNT3P45378 269 aaPredicted RBP15.87■□□□□ 0.13
LMNA-222ENST00000508500 ZNF140P52738 457 aaPredicted RBP15.87■□□□□ 0.13
LMNA-222ENST00000508500 TMPRSS15P98073 1019 aa15.87■□□□□ 0.13
LMNA-222ENST00000508500 NFKB2Q00653 900 aa15.87■□□□□ 0.13
LMNA-222ENST00000508500 NFATC3Q12968 1075 aa15.87■□□□□ 0.13
LMNA-222ENST00000508500 KLF1Q13351 362 aaPredicted RBP15.87■□□□□ 0.13
LMNA-222ENST00000508500 KCTD11Q693B1 232 aa15.87■□□□□ 0.13
LMNA-222ENST00000508500 DUS1LQ6P1R4 473 aaKnown RBP15.87■□□□□ 0.13
LMNA-222ENST00000508500 FAM92BQ6ZTR7 304 aa15.87■□□□□ 0.13
LMNA-222ENST00000508500 PRSS42Q7Z5A4 293 aa15.87■□□□□ 0.13
LMNA-222ENST00000508500 RBM12BQ8IXT5 1001 aaKnown RBP15.87■□□□□ 0.13
LMNA-222ENST00000508500 LILRA3Q8N6C8 439 aaPredicted RBP15.87■□□□□ 0.13
LMNA-222ENST00000508500 SLC45A3Q96JT2 553 aa15.87■□□□□ 0.13
LMNA-222ENST00000508500 ARHGAP9Q9BRR9 750 aa15.87■□□□□ 0.13
LMNA-222ENST00000508500 FAM96AQ9H5X1 160 aa15.87■□□□□ 0.13
LMNA-222ENST00000508500 ARNT2Q9HBZ2 717 aa15.87■□□□□ 0.13
LMNA-222ENST00000508500 SEMA5BQ9P283 1151 aa15.87■□□□□ 0.13
LMNA-222ENST00000508500 R3HDM2Q9Y2K5 976 aaKnown RBP15.87■□□□□ 0.13
LMNA-222ENST00000508500 AAR2Q9Y312 384 aaKnown RBP15.87■□□□□ 0.13
LMNA-222ENST00000508500 CFAP20Q9Y6A4 193 aaKnown RBP15.87■□□□□ 0.13
LMNA-222ENST00000508500 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.87■□□□□ 0.13
LMNA-222ENST00000508500 MED13Q9UHV7 2174 aa15.87■□□□□ 0.13
LMNA-222ENST00000508500 FER1L5A0AVI2 2057 aa15.87■□□□□ 0.13
LMNA-222ENST00000508500 IGHV5-51A0A0C4DH38 117 aa15.86■□□□□ 0.13
LMNA-222ENST00000508500 TCRBV7S2A1N4TA0A589 114 aa15.86■□□□□ 0.13
LMNA-222ENST00000508500 MGAT4DA6NG13 374 aa15.86■□□□□ 0.13
LMNA-222ENST00000508500 C2orf81A6NN90 581 aa15.86■□□□□ 0.13
LMNA-222ENST00000508500 CCL22O00626 93 aa15.86■□□□□ 0.13
LMNA-222ENST00000508500 LDB2O43679 373 aa15.86■□□□□ 0.13
LMNA-222ENST00000508500 SLC28A2O43868 658 aa15.86■□□□□ 0.13
LMNA-222ENST00000508500 TJP3O95049 919 aa15.86■□□□□ 0.13
LMNA-222ENST00000508500 METTL18O95568 372 aa15.86■□□□□ 0.13
LMNA-222ENST00000508500 MSH3P20585 1137 aa15.86■□□□□ 0.13
LMNA-222ENST00000508500 MSNP26038 577 aaKnown RBP15.86■□□□□ 0.13
LMNA-222ENST00000508500 PBLDP30039 288 aaPredicted RBP15.86■□□□□ 0.13
LMNA-222ENST00000508500 CDKN1CP49918 316 aaPredicted RBP15.86■□□□□ 0.13
LMNA-222ENST00000508500 GDF10P55107 478 aa15.86■□□□□ 0.13
LMNA-222ENST00000508500 FOXM1Q08050 763 aa15.86■□□□□ 0.13
LMNA-222ENST00000508500 CACHD1Q5VU97 1274 aa15.86■□□□□ 0.13
LMNA-222ENST00000508500 CERS6Q6ZMG9 384 aa15.86■□□□□ 0.13
LMNA-222ENST00000508500 SPDYE1Q8NFV5 336 aaPredicted RBP15.86■□□□□ 0.13
LMNA-222ENST00000508500 OR6C1Q96RD1 312 aa15.86■□□□□ 0.13
LMNA-222ENST00000508500 BAG1Q99933 345 aaPredicted RBP15.86■□□□□ 0.13
LMNA-222ENST00000508500 TBL1YQ9BQ87 522 aa15.86■□□□□ 0.13
LMNA-222ENST00000508500 DESI2Q9BSY9 194 aa15.86■□□□□ 0.13
LMNA-222ENST00000508500 ZCCHC2Q9C0B9 1178 aaKnown RBP15.86■□□□□ 0.13
LMNA-222ENST00000508500 WWP1Q9H0M0 922 aa15.86■□□□□ 0.13
LMNA-222ENST00000508500 MRPS18BQ9Y676 258 aaKnown RBP15.86■□□□□ 0.13
LMNA-222ENST00000508500 TIAF1O95411 115 aa15.85■□□□□ 0.13
LMNA-222ENST00000508500 PRSS56P0CW18 603 aa15.85■□□□□ 0.13
LMNA-222ENST00000508500 MTHFD1P11586 935 aaKnown RBP15.85■□□□□ 0.13
LMNA-222ENST00000508500 FGF5P12034 268 aa15.85■□□□□ 0.13
LMNA-222ENST00000508500 AKT1P31749 480 aa15.85■□□□□ 0.13
LMNA-222ENST00000508500 STAT5AP42229 794 aa15.85■□□□□ 0.13
LMNA-222ENST00000508500 HALP42357 657 aa15.85■□□□□ 0.13
LMNA-222ENST00000508500 ABHD18Q0P651 414 aa15.85■□□□□ 0.13
LMNA-222ENST00000508500 PRPSAP1Q14558 356 aa15.85■□□□□ 0.13
LMNA-222ENST00000508500 LONRF2Q1L5Z9 754 aa15.85■□□□□ 0.13
LMNA-222ENST00000508500 BCL7AQ4VC05 210 aa15.85■□□□□ 0.13
LMNA-222ENST00000508500 IRGCQ6NXR0 463 aa15.85■□□□□ 0.13
LMNA-222ENST00000508500 OR2L2Q8NH16 312 aa15.85■□□□□ 0.13
LMNA-222ENST00000508500 ELMO2Q96JJ3 720 aa15.85■□□□□ 0.13
LMNA-222ENST00000508500 LINC00615Q96LM1 132 aaPredicted RBP15.85■□□□□ 0.13
LMNA-222ENST00000508500 RMDN2Q96LZ7 410 aa15.85■□□□□ 0.13
LMNA-222ENST00000508500 GPN2Q9H9Y4 310 aaPredicted RBP15.85■□□□□ 0.13
LMNA-222ENST00000508500 IMP3Q9NV31 184 aaKnown RBP15.85■□□□□ 0.13
LMNA-222ENST00000508500 AMFRQ9UKV5 643 aa15.85■□□□□ 0.13
LMNA-222ENST00000508500 FLNCQ14315 2725 aa15.85■□□□□ 0.13
LMNA-222ENST00000508500 TNRC6AQ8NDV7 1962 aaKnown RBP15.84■□□□□ 0.13
LMNA-222ENST00000508500 ESPNB1AK53 854 aa15.84■□□□□ 0.13
LMNA-222ENST00000508500 ARHGAP6O43182 974 aa15.84■□□□□ 0.13
LMNA-222ENST00000508500 RASSF9O75901 435 aa15.84■□□□□ 0.13
LMNA-222ENST00000508500 IPO7O95373 1038 aaKnown RBP15.84■□□□□ 0.13
LMNA-222ENST00000508500 FTCDO95954 541 aa15.84■□□□□ 0.13
LMNA-222ENST00000508500 NELFEP18615 380 aaKnown RBP15.84■□□□□ 0.13
LMNA-222ENST00000508500 OAS2P29728 719 aaKnown RBP15.84■□□□□ 0.13
LMNA-222ENST00000508500 CSRP3P50461 194 aa15.84■□□□□ 0.13
LMNA-222ENST00000508500 CCZ1BP86790 482 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms