RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 ZNF778Q96MU6 729 aa23.65■■□□□ 1.38
SRPK1-210ENST00000508473 WWP1Q9H0M0 922 aa23.65■■□□□ 1.38
SRPK1-210ENST00000508473 UCK1Q9HA47 277 aa23.65■■□□□ 1.38
SRPK1-210ENST00000508473 SLC40A1Q9NP59 571 aa23.65■■□□□ 1.38
SRPK1-210ENST00000508473 EIF2B3Q9NR50 452 aaKnown RBP23.65■■□□□ 1.38
SRPK1-210ENST00000508473 OGFRQ9NZT2 677 aa23.65■■□□□ 1.38
SRPK1-210ENST00000508473 TTC7AQ9ULT0 858 aaPredicted RBP23.65■■□□□ 1.38
SRPK1-210ENST00000508473 USP27XA6NNY8 438 aa23.64■■□□□ 1.37
SRPK1-210ENST00000508473 KLK10O43240 276 aa23.64■■□□□ 1.37
SRPK1-210ENST00000508473 AMD1P17707 334 aa23.64■■□□□ 1.37
SRPK1-210ENST00000508473 CSTF2P33240 577 aaKnown RBP eCLIP23.64■■□□□ 1.37
SRPK1-210ENST00000508473 PRLHRP49683 370 aa23.64■■□□□ 1.37
SRPK1-210ENST00000508473 TLE3Q04726 772 aa23.64■■□□□ 1.37
SRPK1-210ENST00000508473 XKR5Q6UX68 686 aa23.64■■□□□ 1.37
SRPK1-210ENST00000508473 LINC00615Q96LM1 132 aaPredicted RBP23.64■■□□□ 1.37
SRPK1-210ENST00000508473 RANBP9Q96S59 729 aa23.64■■□□□ 1.37
SRPK1-210ENST00000508473 OSBPL9Q96SU4 736 aa23.64■■□□□ 1.37
SRPK1-210ENST00000508473 IMP3Q9NV31 184 aaKnown RBP23.64■■□□□ 1.37
SRPK1-210ENST00000508473 WDR70Q9NW82 654 aa23.64■■□□□ 1.37
SRPK1-210ENST00000508473 TCAF1Q9Y4C2 921 aa23.64■■□□□ 1.37
SRPK1-210ENST00000508473 PCDHGA7Q9Y5G6 932 aa23.64■■□□□ 1.37
SRPK1-210ENST00000508473 ADAMTS20P59510 1910 aa23.63■■□□□ 1.37
SRPK1-210ENST00000508473 IGLV3-16A0A075B6K0 115 aa23.63■■□□□ 1.37
SRPK1-210ENST00000508473 PRAMEF10O60809 474 aa23.63■■□□□ 1.37
SRPK1-210ENST00000508473 UBXN7O94888 489 aa23.63■■□□□ 1.37
SRPK1-210ENST00000508473 GOT2P00505 430 aaKnown RBP23.63■■□□□ 1.37
SRPK1-210ENST00000508473 FGF3P11487 239 aaPredicted RBP23.63■■□□□ 1.37
SRPK1-210ENST00000508473 FOXN2P32314 431 aa23.63■■□□□ 1.37
SRPK1-210ENST00000508473 CRADDP78560 199 aa23.63■■□□□ 1.37
SRPK1-210ENST00000508473 LAMB3Q13751 1172 aa23.63■■□□□ 1.37
SRPK1-210ENST00000508473 DUS1LQ6P1R4 473 aaKnown RBP23.63■■□□□ 1.37
SRPK1-210ENST00000508473 CLDN19Q8N6F1 224 aa23.63■■□□□ 1.37
SRPK1-210ENST00000508473 AGBL5Q8NDL9 886 aa23.63■■□□□ 1.37
SRPK1-210ENST00000508473 PPHLN1Q8NEY8 458 aaKnown RBP23.63■■□□□ 1.37
SRPK1-210ENST00000508473 SPDYE1Q8NFV5 336 aaPredicted RBP23.63■■□□□ 1.37
SRPK1-210ENST00000508473 INSM2Q96T92 566 aaPredicted RBP23.63■■□□□ 1.37
SRPK1-210ENST00000508473 EPB41L1Q9H4G0 881 aa23.63■■□□□ 1.37
SRPK1-210ENST00000508473 OCIAD1Q9NX40 245 aa23.63■■□□□ 1.37
SRPK1-210ENST00000508473 FOXJ2Q9P0K8 574 aa23.63■■□□□ 1.37
SRPK1-210ENST00000508473 PDP2Q9P2J9 529 aa23.63■■□□□ 1.37
SRPK1-210ENST00000508473 LAMA5O15230 3695 aa23.63■■□□□ 1.37
SRPK1-210ENST00000508473 TCRBV7S3A2A0A539 114 aa23.62■■□□□ 1.37
SRPK1-210ENST00000508473 PGRMC1O00264 195 aaKnown RBP23.62■■□□□ 1.37
SRPK1-210ENST00000508473 KRT14P02533 472 aa23.62■■□□□ 1.37
SRPK1-210ENST00000508473 GFERP55789 205 aa23.62■■□□□ 1.37
SRPK1-210ENST00000508473 PDZD3Q86UT5 571 aa23.62■■□□□ 1.37
SRPK1-210ENST00000508473 FAM129CQ86XR2 697 aa23.62■■□□□ 1.37
SRPK1-210ENST00000508473 RBM12BQ8IXT5 1001 aaKnown RBP23.62■■□□□ 1.37
SRPK1-210ENST00000508473 OR6P1Q8NGX9 317 aa23.62■■□□□ 1.37
SRPK1-210ENST00000508473 HM13Q8TCT9 377 aa23.62■■□□□ 1.37
SRPK1-210ENST00000508473 RSC1A1Q92681 617 aa23.62■■□□□ 1.37
SRPK1-210ENST00000508473 C12orf66Q96MD2 445 aa23.62■■□□□ 1.37
SRPK1-210ENST00000508473 ACSL5Q9ULC5 683 aa23.62■■□□□ 1.37
SRPK1-210ENST00000508473 PRSS21Q9Y6M0 314 aa23.62■■□□□ 1.37
SRPK1-210ENST00000508473 EFCAB7A8K855 629 aa23.61■■□□□ 1.37
SRPK1-210ENST00000508473 C9orf172C9J069 976 aa23.61■■□□□ 1.37
SRPK1-210ENST00000508473 ZNF185O15231 689 aa23.61■■□□□ 1.37
SRPK1-210ENST00000508473 NVLO15381 856 aaKnown RBP23.61■■□□□ 1.37
SRPK1-210ENST00000508473 SLC35G4P0C7Q5 338 aa23.61■■□□□ 1.37
SRPK1-210ENST00000508473 MTHFD1P11586 935 aaKnown RBP23.61■■□□□ 1.37
SRPK1-210ENST00000508473 GPS1Q13098 491 aa23.61■■□□□ 1.37
SRPK1-210ENST00000508473 AFTPHQ6ULP2 937 aa23.61■■□□□ 1.37
SRPK1-210ENST00000508473 PLXDC1Q8IUK5 500 aa23.61■■□□□ 1.37
SRPK1-210ENST00000508473 PMEPA1Q969W9 287 aa23.61■■□□□ 1.37
SRPK1-210ENST00000508473 RMDN2Q96LZ7 410 aa23.61■■□□□ 1.37
SRPK1-210ENST00000508473 TGM7Q96PF1 710 aa23.61■■□□□ 1.37
SRPK1-210ENST00000508473 NAP1L3Q99457 506 aaPredicted RBP23.61■■□□□ 1.37
SRPK1-210ENST00000508473 CCM2Q9BSQ5 444 aa23.61■■□□□ 1.37
SRPK1-210ENST00000508473 CHRAC1Q9NRG0 131 aa23.61■■□□□ 1.37
SRPK1-210ENST00000508473 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.61■■□□□ 1.37
SRPK1-210ENST00000508473 KLHL33A6NCF5 533 aa23.6■■□□□ 1.37
SRPK1-210ENST00000508473 COILP38432 576 aaPredicted RBP23.6■■□□□ 1.37
SRPK1-210ENST00000508473 CLN3Q13286 438 aa23.6■■□□□ 1.37
SRPK1-210ENST00000508473 GSE1Q14687 1217 aa23.6■■□□□ 1.37
SRPK1-210ENST00000508473 PCID2Q5JVF3 399 aa23.6■■□□□ 1.37
SRPK1-210ENST00000508473 NLRP9Q7RTR0 991 aa23.6■■□□□ 1.37
SRPK1-210ENST00000508473 ARHGAP22Q7Z5H3 698 aa23.6■■□□□ 1.37
SRPK1-210ENST00000508473 ZFAND4Q86XD8 727 aa23.6■■□□□ 1.37
SRPK1-210ENST00000508473 ART4Q93070 314 aa23.6■■□□□ 1.37
SRPK1-210ENST00000508473 TBRG4Q969Z0 631 aaKnown RBP eCLIP23.6■■□□□ 1.372e-6■■■■■ 41.8
SRPK1-210ENST00000508473 DPH1Q9BZG8 443 aa23.6■■□□□ 1.37
SRPK1-210ENST00000508473 COG4Q9H9E3 785 aa23.6■■□□□ 1.37
SRPK1-210ENST00000508473 RIMKLBQ9ULI2 386 aa23.6■■□□□ 1.37
SRPK1-210ENST00000508473 PYCARDQ9ULZ3 195 aa23.6■■□□□ 1.37
SRPK1-210ENST00000508473 SNX12Q9UMY4 172 aa23.6■■□□□ 1.37
SRPK1-210ENST00000508473 CFAP47Q6ZTR5 3102 aa23.6■■□□□ 1.37
SRPK1-210ENST00000508473 ZFHX4Q86UP3 3567 aa23.59■■□□□ 1.37
SRPK1-210ENST00000508473 CAPN5O15484 640 aaPredicted RBP23.59■■□□□ 1.37
SRPK1-210ENST00000508473 TPSB2P20231 275 aa23.59■■□□□ 1.37
SRPK1-210ENST00000508473 MGAT1P26572 445 aa23.59■■□□□ 1.37
SRPK1-210ENST00000508473 LEPRP48357 1165 aaKnown RBP23.59■■□□□ 1.37
SRPK1-210ENST00000508473 PRAMEP78395 509 aa23.59■■□□□ 1.37
SRPK1-210ENST00000508473 ACVR1Q04771 509 aa23.59■■□□□ 1.37
SRPK1-210ENST00000508473 ITIH4Q14624 930 aa23.59■■□□□ 1.37
SRPK1-210ENST00000508473 PLCL1Q15111 1095 aa23.59■■□□□ 1.37
SRPK1-210ENST00000508473 TGIF1Q15583 401 aa23.59■■□□□ 1.37
SRPK1-210ENST00000508473 TPSAB1Q15661 275 aa23.59■■□□□ 1.37
SRPK1-210ENST00000508473 TMEM164Q5U3C3 297 aa23.59■■□□□ 1.37
SRPK1-210ENST00000508473 BROXQ5VW32 411 aa23.59■■□□□ 1.37
SRPK1-210ENST00000508473 CCDC137Q6PK04 289 aaKnown RBP23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms