RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 KLHL32Q96NJ5 620 aa17.38■□□□□ 0.37
SFXN1-208ENST00000507823 SPAG4Q9NPE6 437 aa17.38■□□□□ 0.37
SFXN1-208ENST00000507823 C6orf203Q9P0P8 240 aaPredicted RBP17.38■□□□□ 0.37
SFXN1-208ENST00000507823 DPP7Q9UHL4 492 aa17.38■□□□□ 0.37
SFXN1-208ENST00000507823 CROTQ9UKG9 612 aa17.38■□□□□ 0.37
SFXN1-208ENST00000507823 PACSIN3Q9UKS6 424 aa17.38■□□□□ 0.37
SFXN1-208ENST00000507823 A8MX80 341 aa17.38■□□□□ 0.37
SFXN1-208ENST00000507823 ARHGEF15O94989 841 aa17.38■□□□□ 0.37
SFXN1-208ENST00000507823 OR4F21O95013 312 aa17.38■□□□□ 0.37
SFXN1-208ENST00000507823 VIPR1P32241 457 aa17.38■□□□□ 0.37
SFXN1-208ENST00000507823 TRAF3Q13114 568 aa17.38■□□□□ 0.37
SFXN1-208ENST00000507823 GTF2H2Q13888 395 aa17.38■□□□□ 0.37
SFXN1-208ENST00000507823 EML3Q32P44 896 aa17.38■□□□□ 0.37
SFXN1-208ENST00000507823 PDCD4Q53EL6 469 aaKnown RBP17.38■□□□□ 0.37
SFXN1-208ENST00000507823 GTF2H2CQ6P1K8 395 aa17.38■□□□□ 0.37
SFXN1-208ENST00000507823 BLOC1S3Q6QNY0 202 aa17.38■□□□□ 0.37
SFXN1-208ENST00000507823 RFLNAQ6ZTI6 216 aa17.38■□□□□ 0.37
SFXN1-208ENST00000507823 SPRED2Q7Z698 418 aa17.38■□□□□ 0.37
SFXN1-208ENST00000507823 RETREG3Q86VR2 466 aa17.38■□□□□ 0.37
SFXN1-208ENST00000507823 PCYOX1LQ8NBM8 494 aa17.38■□□□□ 0.37
SFXN1-208ENST00000507823 OR2T11Q8NH01 316 aa17.38■□□□□ 0.37
SFXN1-208ENST00000507823 LRIG1Q96JA1 1093 aa17.38■□□□□ 0.37
SFXN1-208ENST00000507823 NOL11Q9H8H0 719 aaKnown RBP17.38■□□□□ 0.37
SFXN1-208ENST00000507823 MAP10Q9P2G4 905 aa17.38■□□□□ 0.37
SFXN1-208ENST00000507823 DKK3Q9UBP4 350 aa17.38■□□□□ 0.37
SFXN1-208ENST00000507823 GIPC1O14908 333 aa17.37■□□□□ 0.37
SFXN1-208ENST00000507823 HOXC11O43248 304 aaPredicted RBP17.37■□□□□ 0.37
SFXN1-208ENST00000507823 PEX1O43933 1283 aa17.37■□□□□ 0.37
SFXN1-208ENST00000507823 SRPRAP08240 638 aaKnown RBP17.37■□□□□ 0.37
SFXN1-208ENST00000507823 CYP2A6P11509 494 aaPredicted RBP17.37■□□□□ 0.37
SFXN1-208ENST00000507823 ITGB6P18564 788 aa17.37■□□□□ 0.37
SFXN1-208ENST00000507823 ZFP36L2P47974 494 aaKnown RBP17.37■□□□□ 0.37
SFXN1-208ENST00000507823 ERVK-8P63133 956 aa17.37■□□□□ 0.37
SFXN1-208ENST00000507823 TRIM25Q14258 630 aaKnown RBP17.37■□□□□ 0.37
SFXN1-208ENST00000507823 KIF19Q2TAC6 998 aa17.37■□□□□ 0.37
SFXN1-208ENST00000507823 RHBDF1Q96CC6 855 aa17.37■□□□□ 0.37
SFXN1-208ENST00000507823 TMEM79Q9BSE2 394 aa17.37■□□□□ 0.37
SFXN1-208ENST00000507823 RIC8BQ9NVN3 520 aa17.37■□□□□ 0.37
SFXN1-208ENST00000507823 PKD2L2Q9NZM6 624 aa17.37■□□□□ 0.37
SFXN1-208ENST00000507823 ABCD2Q9UBJ2 740 aa17.37■□□□□ 0.37
SFXN1-208ENST00000507823 OTCP00480 354 aa17.37■□□□□ 0.37
SFXN1-208ENST00000507823 CAPNS1P04632 268 aa17.37■□□□□ 0.37
SFXN1-208ENST00000507823 VCLP18206 1134 aa17.37■□□□□ 0.37
SFXN1-208ENST00000507823 CAPN3P20807 821 aa17.37■□□□□ 0.37
SFXN1-208ENST00000507823 PHKG1Q16816 387 aa17.37■□□□□ 0.37
SFXN1-208ENST00000507823 Q6ZSR9 355 aa17.37■□□□□ 0.37
SFXN1-208ENST00000507823 CELF5Q8N6W0 485 aaKnown RBP17.37■□□□□ 0.37
SFXN1-208ENST00000507823 WFIKKN2Q8TEU8 576 aa17.37■□□□□ 0.37
SFXN1-208ENST00000507823 N4BP2L2Q92802 583 aaPredicted RBP17.37■□□□□ 0.37
SFXN1-208ENST00000507823 ECSITQ9BQ95 431 aa17.37■□□□□ 0.37
SFXN1-208ENST00000507823 NSUN3Q9H649 340 aaKnown RBP17.37■□□□□ 0.37
SFXN1-208ENST00000507823 ASLP04424 464 aa17.36■□□□□ 0.37
SFXN1-208ENST00000507823 AOAHP28039 575 aa17.36■□□□□ 0.37
SFXN1-208ENST00000507823 RECQLP46063 649 aaPredicted RBP17.36■□□□□ 0.37
SFXN1-208ENST00000507823 CDKL1Q00532 357 aa17.36■□□□□ 0.37
SFXN1-208ENST00000507823 SEMG2Q02383 582 aa17.36■□□□□ 0.37
SFXN1-208ENST00000507823 FOXM1Q08050 763 aa17.36■□□□□ 0.37
SFXN1-208ENST00000507823 DHCR24Q15392 516 aa17.36■□□□□ 0.37
SFXN1-208ENST00000507823 C18orf21Q32NC0 220 aaPredicted RBP17.36■□□□□ 0.37
SFXN1-208ENST00000507823 SPATS1Q496A3 300 aa17.36■□□□□ 0.37
SFXN1-208ENST00000507823 PRMT9Q6P2P2 845 aa17.36■□□□□ 0.37
SFXN1-208ENST00000507823 MINDY1Q8N5J2 469 aa17.36■□□□□ 0.37
SFXN1-208ENST00000507823 DUS3LQ96G46 650 aaKnown RBP17.36■□□□□ 0.37
SFXN1-208ENST00000507823 LRRC3BQ96PB8 259 aa17.36■□□□□ 0.37
SFXN1-208ENST00000507823 HOPXQ9BPY8 73 aaPredicted RBP17.36■□□□□ 0.37
SFXN1-208ENST00000507823 CD244Q9BZW8 370 aa17.36■□□□□ 0.37
SFXN1-208ENST00000507823 VCX3BQ9H321 246 aa17.36■□□□□ 0.37
SFXN1-208ENST00000507823 HEBP1Q9NRV9 189 aa17.36■□□□□ 0.37
SFXN1-208ENST00000507823 ZIM2Q9NZV7 527 aa17.36■□□□□ 0.37
SFXN1-208ENST00000507823 SLC27A6Q9Y2P4 619 aa17.36■□□□□ 0.37
SFXN1-208ENST00000507823 BNIP3LO60238 219 aa17.36■□□□□ 0.37
SFXN1-208ENST00000507823 NUAK1O60285 661 aa17.36■□□□□ 0.37
SFXN1-208ENST00000507823 CSPG5O95196 566 aa17.36■□□□□ 0.37
SFXN1-208ENST00000507823 C8BP07358 591 aa17.36■□□□□ 0.37
SFXN1-208ENST00000507823 BLMHQ13867 455 aa17.36■□□□□ 0.37
SFXN1-208ENST00000507823 RCAN2Q14206 197 aa17.36■□□□□ 0.37
SFXN1-208ENST00000507823 SAMD4BQ5PRF9 694 aaKnown RBP17.36■□□□□ 0.37
SFXN1-208ENST00000507823 ANO7Q6IWH7 933 aa17.36■□□□□ 0.37
SFXN1-208ENST00000507823 IRGCQ6NXR0 463 aa17.36■□□□□ 0.37
SFXN1-208ENST00000507823 RASGRP3Q8IV61 690 aa17.36■□□□□ 0.37
SFXN1-208ENST00000507823 PQLC1Q8N2U9 271 aa17.36■□□□□ 0.37
SFXN1-208ENST00000507823 SNX31Q8N9S9 440 aa17.36■□□□□ 0.37
SFXN1-208ENST00000507823 NAT14Q8WUY8 206 aa17.36■□□□□ 0.37
SFXN1-208ENST00000507823 ACOX2Q99424 681 aa17.36■□□□□ 0.37
SFXN1-208ENST00000507823 FAM83CQ9BQN1 747 aa17.36■□□□□ 0.37
SFXN1-208ENST00000507823 RAD18Q9NS91 495 aa17.36■□□□□ 0.37
SFXN1-208ENST00000507823 PRSS51A0A1B0GVH4 220 aa17.35■□□□□ 0.37
SFXN1-208ENST00000507823 CYP17A1P05093 508 aa17.35■□□□□ 0.37
SFXN1-208ENST00000507823 OR56A5P0C7T3 313 aa17.35■□□□□ 0.37
SFXN1-208ENST00000507823 TIMP2P16035 220 aa17.35■□□□□ 0.37
SFXN1-208ENST00000507823 MSH3P20585 1137 aa17.35■□□□□ 0.37
SFXN1-208ENST00000507823 CCR7P32248 378 aa17.35■□□□□ 0.37
SFXN1-208ENST00000507823 GGT5P36269 586 aa17.35■□□□□ 0.37
SFXN1-208ENST00000507823 DIO3P55073 304 aa17.35■□□□□ 0.37
SFXN1-208ENST00000507823 C6orf136Q5SQH8 315 aa17.35■□□□□ 0.37
SFXN1-208ENST00000507823 OGFRL1Q5TC84 451 aaPredicted RBP17.35■□□□□ 0.37
SFXN1-208ENST00000507823 DNAJC5GQ8N7S2 189 aa17.35■□□□□ 0.37
SFXN1-208ENST00000507823 CDYL2Q8N8U2 506 aa17.35■□□□□ 0.37
SFXN1-208ENST00000507823 OR4F6Q8NGB9 312 aa17.35■□□□□ 0.37
SFXN1-208ENST00000507823 NTMT1Q9BV86 223 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms