RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 CIDEBQ9UHD4 219 aa12.01□□□□□ -0.49
LIN54-206ENST00000506560 POMPQ9Y244 141 aa12.01□□□□□ -0.49
LIN54-206ENST00000506560 C16orf96A6NNT2 1141 aa12□□□□□ -0.49
LIN54-206ENST00000506560 UPK3BL1B0FP48 263 aa12□□□□□ -0.49
LIN54-206ENST00000506560 UPK3BL2E5RIL1 263 aa12□□□□□ -0.49
LIN54-206ENST00000506560 PSMD12O00232 456 aaPredicted RBP12□□□□□ -0.49
LIN54-206ENST00000506560 OR7A17O14581 309 aa12□□□□□ -0.49
LIN54-206ENST00000506560 SGTAO43765 313 aa12□□□□□ -0.49
LIN54-206ENST00000506560 TCF3P15923 654 aa12□□□□□ -0.49
LIN54-206ENST00000506560 TCN1P20061 433 aaPredicted RBP12□□□□□ -0.49
LIN54-206ENST00000506560 FCARP24071 287 aa12□□□□□ -0.49
LIN54-206ENST00000506560 AKT1P31749 480 aa12□□□□□ -0.49
LIN54-206ENST00000506560 CEACAM7Q14002 265 aa12□□□□□ -0.49
LIN54-206ENST00000506560 PTK2BQ14289 1009 aa12□□□□□ -0.49
LIN54-206ENST00000506560 NET1Q7Z628 596 aaPredicted RBP12□□□□□ -0.49
LIN54-206ENST00000506560 ARHGAP24Q8N264 748 aa12□□□□□ -0.49
LIN54-206ENST00000506560 KYQ8NBH2 561 aa12□□□□□ -0.49
LIN54-206ENST00000506560 CHFRQ96EP1 664 aa12□□□□□ -0.49
LIN54-206ENST00000506560 SAMD11Q96NU1 681 aa12□□□□□ -0.49
LIN54-206ENST00000506560 C1orf50Q9BV19 199 aa12□□□□□ -0.49
LIN54-206ENST00000506560 C1QTNF3Q9BXJ4 246 aa12□□□□□ -0.49
LIN54-206ENST00000506560 DCLRE1BQ9H816 532 aa12□□□□□ -0.49
LIN54-206ENST00000506560 HCN2Q9UL51 889 aa12□□□□□ -0.49
LIN54-206ENST00000506560 NUMA1Q14980 2115 aa12□□□□□ -0.49
LIN54-206ENST00000506560 SLC9A3R1O14745 358 aaPredicted RBP12□□□□□ -0.49
LIN54-206ENST00000506560 HGFP14210 728 aa12□□□□□ -0.49
LIN54-206ENST00000506560 FSHRP23945 695 aa12□□□□□ -0.49
LIN54-206ENST00000506560 NSG1P42857 185 aa12□□□□□ -0.49
LIN54-206ENST00000506560 BOP1Q14137 746 aaKnown RBP12□□□□□ -0.49
LIN54-206ENST00000506560 AAK1Q2M2I8 961 aa12□□□□□ -0.49
LIN54-206ENST00000506560 TRIM74Q86UV6 250 aa12□□□□□ -0.49
LIN54-206ENST00000506560 MYO1HQ8N1T3 1032 aa12□□□□□ -0.49
LIN54-206ENST00000506560 AFAP1L2Q8N4X5 818 aa12□□□□□ -0.49
LIN54-206ENST00000506560 SMARCD2Q92925 531 aa12□□□□□ -0.49
LIN54-206ENST00000506560 PDLIM5Q96HC4 596 aaKnown RBP12□□□□□ -0.49
LIN54-206ENST00000506560 TTC1Q99614 292 aa12□□□□□ -0.49
LIN54-206ENST00000506560 EGFL8Q99944 293 aa12□□□□□ -0.49
LIN54-206ENST00000506560 FAM83CQ9BQN1 747 aa12□□□□□ -0.49
LIN54-206ENST00000506560 RPP25Q9BUL9 199 aaKnown RBP12□□□□□ -0.49
LIN54-206ENST00000506560 TRIM8Q9BZR9 551 aa12□□□□□ -0.49
LIN54-206ENST00000506560 SPATS2LQ9NUQ6 558 aaKnown RBP12□□□□□ -0.49
LIN54-206ENST00000506560 NOP53Q9NZM5 478 aaKnown RBP12□□□□□ -0.49
LIN54-206ENST00000506560 ZMYM5Q9UJ78 669 aa12□□□□□ -0.49
LIN54-206ENST00000506560 COL4A3Q01955 1670 aa12□□□□□ -0.49
LIN54-206ENST00000506560 INPP4BO15327 924 aa11.99□□□□□ -0.49
LIN54-206ENST00000506560 HOXC11O43248 304 aaPredicted RBP11.99□□□□□ -0.49
LIN54-206ENST00000506560 CCNT2O60583 730 aaKnown RBP11.99□□□□□ -0.49
LIN54-206ENST00000506560 CRCPO75575 148 aa11.99□□□□□ -0.49
LIN54-206ENST00000506560 CIB2O75838 187 aa11.99□□□□□ -0.49
LIN54-206ENST00000506560 ESRRBO95718 433 aa11.99□□□□□ -0.49
LIN54-206ENST00000506560 XRCC1P18887 633 aaPredicted RBP11.99□□□□□ -0.49
LIN54-206ENST00000506560 GPX3P22352 226 aa11.99□□□□□ -0.49
LIN54-206ENST00000506560 VIPR1P32241 457 aa11.99□□□□□ -0.49
LIN54-206ENST00000506560 NNMTP40261 264 aa11.99□□□□□ -0.49
LIN54-206ENST00000506560 CLNS1AP54105 237 aaKnown RBP11.99□□□□□ -0.49
LIN54-206ENST00000506560 MS4A2Q01362 244 aa11.99□□□□□ -0.49
LIN54-206ENST00000506560 CCDC6Q16204 474 aa11.99□□□□□ -0.49
LIN54-206ENST00000506560 ZNF805Q5CZA5 627 aa11.99□□□□□ -0.49
LIN54-206ENST00000506560 BRAT1Q6PJG6 821 aa11.99□□□□□ -0.49
LIN54-206ENST00000506560 ADAMTSL2Q86TH1 951 aa11.99□□□□□ -0.49
LIN54-206ENST00000506560 RETREG3Q86VR2 466 aa11.99□□□□□ -0.49
LIN54-206ENST00000506560 FBXW8Q8N3Y1 598 aa11.99□□□□□ -0.49
LIN54-206ENST00000506560 SKA2Q8WVK7 121 aaPredicted RBP11.99□□□□□ -0.49
LIN54-206ENST00000506560 SLC2A11Q9BYW1 496 aa11.99□□□□□ -0.49
LIN54-206ENST00000506560 FAM83DQ9H4H8 585 aa11.99□□□□□ -0.49
LIN54-206ENST00000506560 WDR41Q9HAD4 459 aa11.99□□□□□ -0.49
LIN54-206ENST00000506560 NUDT4Q9NZJ9 180 aa11.99□□□□□ -0.49
LIN54-206ENST00000506560 C15orf41Q9Y2V0 281 aa11.99□□□□□ -0.49
LIN54-206ENST00000506560 IGLV3-16A0A075B6K0 115 aa11.99□□□□□ -0.49
LIN54-206ENST00000506560 K7ESM1 405 aa11.99□□□□□ -0.49
LIN54-206ENST00000506560 SNUPNO95149 360 aaKnown RBP11.99□□□□□ -0.49
LIN54-206ENST00000506560 ADH1CP00326 375 aa11.99□□□□□ -0.49
LIN54-206ENST00000506560 CAPN1P07384 714 aa11.99□□□□□ -0.49
LIN54-206ENST00000506560 CTSCP53634 463 aa11.99□□□□□ -0.49
LIN54-206ENST00000506560 MTTPP55157 894 aa11.99□□□□□ -0.49
LIN54-206ENST00000506560 ILF2Q12905 390 aaKnown RBP11.99□□□□□ -0.49
LIN54-206ENST00000506560 SQLEQ14534 574 aa11.99□□□□□ -0.49
LIN54-206ENST00000506560 KIF19Q2TAC6 998 aa11.99□□□□□ -0.49
LIN54-206ENST00000506560 TRMT5Q32P41 509 aaKnown RBP11.99□□□□□ -0.49
LIN54-206ENST00000506560 PPP2R2DQ66LE6 453 aa11.99□□□□□ -0.49
LIN54-206ENST00000506560 VITQ6UXI7 678 aa11.99□□□□□ -0.49
LIN54-206ENST00000506560 GPRIN3Q6ZVF9 776 aa11.99□□□□□ -0.49
LIN54-206ENST00000506560 MYLK4Q86YV6 388 aaPredicted RBP11.99□□□□□ -0.49
LIN54-206ENST00000506560 OR4F6Q8NGB9 312 aa11.99□□□□□ -0.49
LIN54-206ENST00000506560 STON2Q8WXE9 905 aa11.99□□□□□ -0.49
LIN54-206ENST00000506560 ARRDC3Q96B67 414 aa11.99□□□□□ -0.49
LIN54-206ENST00000506560 FARSBQ9NSD9 589 aaKnown RBP11.99□□□□□ -0.49
LIN54-206ENST00000506560 PTBP2Q9UKA9 531 aaKnown RBP11.99□□□□□ -0.49
LIN54-206ENST00000506560 PLXNA2O75051 1894 aa11.98□□□□□ -0.49
LIN54-206ENST00000506560 CXorf51AA0A1B0GTR3 108 aa11.98□□□□□ -0.49
LIN54-206ENST00000506560 FFAR3O14843 346 aa11.98□□□□□ -0.49
LIN54-206ENST00000506560 GPR42O15529 346 aa11.98□□□□□ -0.49
LIN54-206ENST00000506560 DGKAP23743 735 aa11.98□□□□□ -0.49
LIN54-206ENST00000506560 POLR2LP62875 67 aaKnown RBP11.98□□□□□ -0.49
LIN54-206ENST00000506560 GTF2H2Q13888 395 aa11.98□□□□□ -0.49
LIN54-206ENST00000506560 FNDC3BQ53EP0 1204 aaKnown RBP11.98□□□□□ -0.49
LIN54-206ENST00000506560 C9orf64Q5T6V5 341 aa11.98□□□□□ -0.49
LIN54-206ENST00000506560 REP15Q6BDI9 236 aa11.98□□□□□ -0.49
LIN54-206ENST00000506560 GTF2H2CQ6P1K8 395 aa11.98□□□□□ -0.49
LIN54-206ENST00000506560 SYCE2Q6PIF2 218 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms