RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 SMUG1Q53HV7 270 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 FAM72AQ5TYM5 149 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 FAM72DQ6L9T8 149 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 TIGD7Q6NT04 549 aaPredicted RBP15.69■□□□□ 0.1
SCLT1-208ENST00000506368 CCBE1Q6UXH8 406 aaPredicted RBP15.69■□□□□ 0.1
SCLT1-208ENST00000506368 RANBP10Q6VN20 620 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 FAM72BQ86X60 149 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 CHCHD4Q8N4Q1 142 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 SETD6Q8TBK2 473 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 ANKRD49Q8WVL7 239 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 TTC9Q92623 222 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 C18orf25Q96B23 403 aaPredicted RBP15.69■□□□□ 0.1
SCLT1-208ENST00000506368 TMEM74Q96NL1 305 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 ZNF599Q96NL3 588 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 CDK5RAP1Q96SZ6 601 aaKnown RBP15.69■□□□□ 0.1
SCLT1-208ENST00000506368 SH3GL1Q99961 368 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 APOL4Q9BPW4 351 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 GABARAPL1Q9H0R8 117 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 DCSTAMPQ9H295 470 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 DPEP3Q9H4B8 488 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 SLC45A1Q9Y2W3 748 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 PEX16Q9Y5Y5 336 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 SOWAHBA6NEL2 793 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 CENPXA8MT69 81 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 A8MU76 341 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 PDZK1P1A8MUH7 402 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 TBX1O43435 398 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 UROSP10746 265 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 SUOXP51687 545 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 IL5RAQ01344 420 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 PWP1Q13610 501 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 UBE2UQ5VVX9 321 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 CAPN13Q6MZZ7 669 aaPredicted RBP15.69■□□□□ 0.1
SCLT1-208ENST00000506368 OTOP3Q7RTS5 596 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 HORMAD1Q86X24 394 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 CILP2Q8IUL8 1156 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 TMEM130Q8N3G9 435 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 IL17RDQ8NFM7 739 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 OR6F1Q8NGZ6 308 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 SLC2A14Q8TDB8 520 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 SLC38A4Q969I6 547 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 SLC47A1Q96FL8 570 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 ZNF560Q96MR9 790 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 CCDC32Q9BV29 185 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 C1QTNF3Q9BXJ4 246 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 SMURF2Q9HAU4 748 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 ACOT13Q9NPJ3 140 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 TMPRSS4Q9NRS4 437 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 SLC2A6Q9UGQ3 507 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 BTRCQ9Y297 605 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 ZNF236Q9UL36 1845 aa15.69■□□□□ 0.1
SCLT1-208ENST00000506368 LOC110117498-PIK3R3F6TDL0 507 aa15.68■□□□□ 0.1
SCLT1-208ENST00000506368 PRMT5O14744 637 aaPredicted RBP15.68■□□□□ 0.1
SCLT1-208ENST00000506368 GABRDO14764 452 aa15.68■□□□□ 0.1
SCLT1-208ENST00000506368 CA12O43570 354 aa15.68■□□□□ 0.1
SCLT1-208ENST00000506368 HS6ST1O60243 411 aa15.68■□□□□ 0.1
SCLT1-208ENST00000506368 PSMB9P28065 219 aa15.68■□□□□ 0.1
SCLT1-208ENST00000506368 DIO3P55073 304 aa15.68■□□□□ 0.1
SCLT1-208ENST00000506368 CDH13P55290 713 aa15.68■□□□□ 0.1
SCLT1-208ENST00000506368 FCGRTP55899 365 aa15.68■□□□□ 0.1
SCLT1-208ENST00000506368 NCS1P62166 190 aa15.68■□□□□ 0.1
SCLT1-208ENST00000506368 YBX1P67809 324 aaKnown RBP15.68■□□□□ 0.1
SCLT1-208ENST00000506368 CAP1Q01518 475 aa15.68■□□□□ 0.1
SCLT1-208ENST00000506368 PIGFQ07326 219 aa15.68■□□□□ 0.1
SCLT1-208ENST00000506368 GPR158Q5T848 1215 aa15.68■□□□□ 0.1
SCLT1-208ENST00000506368 ANKS6Q68DC2 871 aa15.68■□□□□ 0.1
SCLT1-208ENST00000506368 SIGIRRQ6IA17 410 aa15.68■□□□□ 0.1
SCLT1-208ENST00000506368 LBX2Q6XYB7 198 aa15.68■□□□□ 0.1
SCLT1-208ENST00000506368 GALNT6Q8NCL4 622 aa15.68■□□□□ 0.1
SCLT1-208ENST00000506368 KBTBD8Q8NFY9 601 aa15.68■□□□□ 0.1
SCLT1-208ENST00000506368 PIK3R3Q92569 461 aa15.68■□□□□ 0.1
SCLT1-208ENST00000506368 ITPAQ9BY32 194 aa15.68■□□□□ 0.1
SCLT1-208ENST00000506368 MFSD1Q9H3U5 465 aa15.68■□□□□ 0.1
SCLT1-208ENST00000506368 INTS7Q9NVH2 962 aaKnown RBP15.68■□□□□ 0.1
SCLT1-208ENST00000506368 OPTCQ9UBM4 332 aa15.68■□□□□ 0.1
SCLT1-208ENST00000506368 N6AMT1Q9Y5N5 214 aa15.68■□□□□ 0.1
SCLT1-208ENST00000506368 DOCK3Q8IZD9 2030 aa15.68■□□□□ 0.1
SCLT1-208ENST00000506368 SYNJ2BP-COX16A0A087WUM0 186 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 ZW10O43264 779 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 MLYCDO95822 493 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 RETP07949 1114 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 LINC00032P0C843 101 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 NPR3P17342 541 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 FDXRP22570 491 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 CD6P30203 668 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 CLK1P49759 484 aaKnown RBP15.67■□□□□ 0.1
SCLT1-208ENST00000506368 ZBTB6Q15916 424 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 TRIM71Q2Q1W2 868 aaKnown RBP15.67■□□□□ 0.1
SCLT1-208ENST00000506368 TYSND1Q2T9J0 566 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 TXNDC11Q6PKC3 985 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 SPESP1Q6UW49 350 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 DLEU7Q6UYE1 221 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 RNF19BQ6ZMZ0 732 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 METTL4Q8N3J2 472 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 PEX13Q92968 403 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 ACTR8Q9H981 624 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 POLR3BQ9NW08 1133 aaPredicted RBP15.67■□□□□ 0.1
SCLT1-208ENST00000506368 COX16Q9P0S2 106 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 SLCO3A1Q9UIG8 710 aa15.67■□□□□ 0.1
SCLT1-208ENST00000506368 V9GYQ6 96 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms