RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 CAPN5O15484 640 aaPredicted RBP16.38■□□□□ 0.21
PDLIM7-215ENST00000506161 ZW10O43264 779 aa16.38■□□□□ 0.21
PDLIM7-215ENST00000506161 LIFP15018 202 aa16.38■□□□□ 0.21
PDLIM7-215ENST00000506161 AKT1P31749 480 aa16.38■□□□□ 0.21
PDLIM7-215ENST00000506161 SEPHS1P49903 392 aa16.38■□□□□ 0.21
PDLIM7-215ENST00000506161 PRPSAP1Q14558 356 aa16.38■□□□□ 0.21
PDLIM7-215ENST00000506161 PARP6Q2NL67 630 aa16.38■□□□□ 0.21
PDLIM7-215ENST00000506161 MANEAQ5SRI9 462 aa16.38■□□□□ 0.21
PDLIM7-215ENST00000506161 ZDHHC20Q5W0Z9 365 aa16.38■□□□□ 0.21
PDLIM7-215ENST00000506161 ARHGEF18Q6ZSZ5 1173 aa16.38■□□□□ 0.21
PDLIM7-215ENST00000506161 PRICKLE2Q7Z3G6 844 aa16.38■□□□□ 0.21
PDLIM7-215ENST00000506161 TRIM48Q8IWZ4 208 aa16.38■□□□□ 0.21
PDLIM7-215ENST00000506161 PIANPQ8IYJ0 282 aa16.38■□□□□ 0.21
PDLIM7-215ENST00000506161 SYCE1Q8N0S2 351 aa16.38■□□□□ 0.21
PDLIM7-215ENST00000506161 C1orf54Q8WWF1 131 aa16.38■□□□□ 0.21
PDLIM7-215ENST00000506161 EXTL1Q92935 676 aa16.38■□□□□ 0.21
PDLIM7-215ENST00000506161 PPM1MQ96MI6 270 aa16.38■□□□□ 0.21
PDLIM7-215ENST00000506161 TTC25Q96NG3 672 aa16.38■□□□□ 0.21
PDLIM7-215ENST00000506161 AKAP7Q9P0M2 348 aaPredicted RBP16.38■□□□□ 0.21
PDLIM7-215ENST00000506161 PILRAQ9UKJ1 303 aa16.38■□□□□ 0.21
PDLIM7-215ENST00000506161 TRBV5-4A0A0C4DH59 114 aa16.37■□□□□ 0.21
PDLIM7-215ENST00000506161 LOC101059948A0A1B0GTJ6 334 aa16.37■□□□□ 0.21
PDLIM7-215ENST00000506161 STMND1H3BQB6 276 aa16.37■□□□□ 0.21
PDLIM7-215ENST00000506161 LIASO43766 372 aa16.37■□□□□ 0.21
PDLIM7-215ENST00000506161 RAD1O60671 282 aa16.37■□□□□ 0.21
PDLIM7-215ENST00000506161 PPFIA2O75334 1257 aa16.37■□□□□ 0.21
PDLIM7-215ENST00000506161 ANKRD34CP0C6C1 535 aa16.37■□□□□ 0.21
PDLIM7-215ENST00000506161 MSH3P20585 1137 aa16.37■□□□□ 0.21
PDLIM7-215ENST00000506161 MC4RP32245 332 aa16.37■□□□□ 0.21
PDLIM7-215ENST00000506161 TNNT3P45378 269 aaPredicted RBP16.37■□□□□ 0.21
PDLIM7-215ENST00000506161 CAPZBP47756 277 aa16.37■□□□□ 0.21
PDLIM7-215ENST00000506161 POU6F1Q14863 301 aa16.37■□□□□ 0.21
PDLIM7-215ENST00000506161 CCDC38Q502W7 563 aa16.37■□□□□ 0.21
PDLIM7-215ENST00000506161 METRNLQ641Q3 311 aa16.37■□□□□ 0.21
PDLIM7-215ENST00000506161 FAM92BQ6ZTR7 304 aa16.37■□□□□ 0.21
PDLIM7-215ENST00000506161 SLC13A5Q86YT5 568 aaPredicted RBP16.37■□□□□ 0.21
PDLIM7-215ENST00000506161 UNC5BQ8IZJ1 945 aa16.37■□□□□ 0.21
PDLIM7-215ENST00000506161 NXPE1Q8N323 547 aa16.37■□□□□ 0.21
PDLIM7-215ENST00000506161 OR52K1Q8NGK4 314 aa16.37■□□□□ 0.21
PDLIM7-215ENST00000506161 CXorf40BQ96DE9 158 aa16.37■□□□□ 0.21
PDLIM7-215ENST00000506161 SLC12A9Q9BXP2 914 aa16.37■□□□□ 0.21
PDLIM7-215ENST00000506161 PRSS21Q9Y6M0 314 aa16.37■□□□□ 0.21
PDLIM7-215ENST00000506161 SPTBP11277 2137 aa16.37■□□□□ 0.21
PDLIM7-215ENST00000506161 IGLV3-16A0A075B6K0 115 aa16.36■□□□□ 0.21
PDLIM7-215ENST00000506161 MGAT4DA6NG13 374 aa16.36■□□□□ 0.21
PDLIM7-215ENST00000506161 STK10O94804 968 aaKnown RBP16.36■□□□□ 0.21
PDLIM7-215ENST00000506161 TIAF1O95411 115 aa16.36■□□□□ 0.21
PDLIM7-215ENST00000506161 AP2A1O95782 977 aa16.36■□□□□ 0.21
PDLIM7-215ENST00000506161 DLGAP3O95886 979 aa16.36■□□□□ 0.21
PDLIM7-215ENST00000506161 MTHFD1P11586 935 aaKnown RBP16.36■□□□□ 0.21
PDLIM7-215ENST00000506161 AMD1P17707 334 aa16.36■□□□□ 0.21
PDLIM7-215ENST00000506161 CD82P27701 267 aa16.36■□□□□ 0.21
PDLIM7-215ENST00000506161 CETN2P41208 172 aa16.36■□□□□ 0.21
PDLIM7-215ENST00000506161 CCZ1BP86790 482 aa16.36■□□□□ 0.21
PDLIM7-215ENST00000506161 CCZ1P86791 482 aaPredicted RBP16.36■□□□□ 0.21
PDLIM7-215ENST00000506161 SNX1Q13596 522 aa16.36■□□□□ 0.21
PDLIM7-215ENST00000506161 BCL7AQ4VC05 210 aa16.36■□□□□ 0.21
PDLIM7-215ENST00000506161 DCAF12Q5T6F0 453 aa16.36■□□□□ 0.21
PDLIM7-215ENST00000506161 FBXO38Q6PIJ6 1188 aa16.36■□□□□ 0.21
PDLIM7-215ENST00000506161 TTC13Q8NBP0 860 aa16.36■□□□□ 0.21
PDLIM7-215ENST00000506161 ZNF778Q96MU6 729 aa16.36■□□□□ 0.21
PDLIM7-215ENST00000506161 ETNK1Q9HBU6 452 aa16.36■□□□□ 0.21
PDLIM7-215ENST00000506161 FBXO8Q9NRD0 319 aa16.36■□□□□ 0.21
PDLIM7-215ENST00000506161 IMP3Q9NV31 184 aaKnown RBP16.36■□□□□ 0.21
PDLIM7-215ENST00000506161 NLE1Q9NVX2 485 aaPredicted RBP16.36■□□□□ 0.21
PDLIM7-215ENST00000506161 IL17BQ9UHF5 180 aa16.36■□□□□ 0.21
PDLIM7-215ENST00000506161 CRLS1Q9UJA2 301 aa16.36■□□□□ 0.21
PDLIM7-215ENST00000506161 BSNQ9UPA5 3926 aa16.36■□□□□ 0.21
PDLIM7-215ENST00000506161 IGHV5-51A0A0C4DH38 117 aa16.35■□□□□ 0.21
PDLIM7-215ENST00000506161 GOLGA6L9A6NEM1 432 aa16.35■□□□□ 0.21
PDLIM7-215ENST00000506161 CRTAMO95727 393 aa16.35■□□□□ 0.21
PDLIM7-215ENST00000506161 POLBP06746 335 aa16.35■□□□□ 0.21
PDLIM7-215ENST00000506161 ZSCAN5DPP0CG00 497 aa16.35■□□□□ 0.21
PDLIM7-215ENST00000506161 ARCN1P48444 511 aaKnown RBP16.35■□□□□ 0.21
PDLIM7-215ENST00000506161 PRLHRP49683 370 aa16.35■□□□□ 0.21
PDLIM7-215ENST00000506161 SEPT6Q14141 434 aa16.35■□□□□ 0.21
PDLIM7-215ENST00000506161 KCNAB1Q14722 419 aa16.35■□□□□ 0.21
PDLIM7-215ENST00000506161 DBN1Q16643 649 aa16.35■□□□□ 0.21
PDLIM7-215ENST00000506161 MEI1Q5TIA1 1274 aa16.35■□□□□ 0.21
PDLIM7-215ENST00000506161 TMEM164Q5U3C3 297 aa16.35■□□□□ 0.21
PDLIM7-215ENST00000506161 IRGCQ6NXR0 463 aa16.35■□□□□ 0.21
PDLIM7-215ENST00000506161 SNX20Q7Z614 316 aa16.35■□□□□ 0.21
PDLIM7-215ENST00000506161 SERPINA9Q86WD7 417 aa16.35■□□□□ 0.21
PDLIM7-215ENST00000506161 PLXDC1Q8IUK5 500 aa16.35■□□□□ 0.21
PDLIM7-215ENST00000506161 CACNA2D3Q8IZS8 1091 aa16.35■□□□□ 0.21
PDLIM7-215ENST00000506161 RNF10Q8N5U6 811 aaKnown RBP16.35■□□□□ 0.21
PDLIM7-215ENST00000506161 CLDN19Q8N6F1 224 aa16.35■□□□□ 0.21
PDLIM7-215ENST00000506161 OR2L2Q8NH16 312 aa16.35■□□□□ 0.21
PDLIM7-215ENST00000506161 CDKN2AIPNLQ96HQ2 116 aa16.35■□□□□ 0.21
PDLIM7-215ENST00000506161 ELMO2Q96JJ3 720 aa16.35■□□□□ 0.21
PDLIM7-215ENST00000506161 LINC00615Q96LM1 132 aaPredicted RBP16.35■□□□□ 0.21
PDLIM7-215ENST00000506161 ZCCHC2Q9C0B9 1178 aaKnown RBP16.35■□□□□ 0.21
PDLIM7-215ENST00000506161 EPB41L1Q9H4G0 881 aa16.35■□□□□ 0.21
PDLIM7-215ENST00000506161 ZNF768Q9H5H4 540 aaKnown RBP16.35■□□□□ 0.21
PDLIM7-215ENST00000506161 LRRC40Q9H9A6 602 aa16.35■□□□□ 0.21
PDLIM7-215ENST00000506161 SLC2A6Q9UGQ3 507 aa16.35■□□□□ 0.21
PDLIM7-215ENST00000506161 HEMK1Q9Y5R4 338 aaPredicted RBP16.35■□□□□ 0.21
PDLIM7-215ENST00000506161 DNMT3AQ9Y6K1 912 aaPredicted RBP16.35■□□□□ 0.21
PDLIM7-215ENST00000506161 FER1L5A0AVI2 2057 aa16.34■□□□□ 0.21
PDLIM7-215ENST00000506161 H7C0S8 307 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms