RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 AK5Q9Y6K8 562 aa13.9□□□□□ -0.18
TCOF1-207ENST00000504761 MAGEA13PA6NCF6 341 aa13.9□□□□□ -0.18
TCOF1-207ENST00000504761 UPK3BL1B0FP48 263 aa13.9□□□□□ -0.18
TCOF1-207ENST00000504761 UPK3BL2E5RIL1 263 aa13.9□□□□□ -0.18
TCOF1-207ENST00000504761 TM7SF2O76062 418 aa13.9□□□□□ -0.18
TCOF1-207ENST00000504761 ACP5P13686 325 aa13.9□□□□□ -0.18
TCOF1-207ENST00000504761 IDSP22304 550 aa13.9□□□□□ -0.18
TCOF1-207ENST00000504761 PGFP49763 221 aa13.9□□□□□ -0.18
TCOF1-207ENST00000504761 GPRC6AQ5T6X5 926 aa13.9□□□□□ -0.18
TCOF1-207ENST00000504761 LHX8Q68G74 356 aa13.9□□□□□ -0.18
TCOF1-207ENST00000504761 ZFP1Q6P2D0 407 aa13.9□□□□□ -0.18
TCOF1-207ENST00000504761 GALNT13Q8IUC8 556 aa13.9□□□□□ -0.18
TCOF1-207ENST00000504761 ZC3H7AQ8IWR0 971 aaKnown RBP13.9□□□□□ -0.18
TCOF1-207ENST00000504761 HERC2P3Q9BVR0 1158 aa13.9□□□□□ -0.18
TCOF1-207ENST00000504761 HS6ST1O60243 411 aa13.9□□□□□ -0.19
TCOF1-207ENST00000504761 GABBR2O75899 941 aa13.9□□□□□ -0.19
TCOF1-207ENST00000504761 PPP2R1BP30154 601 aa13.9□□□□□ -0.19
TCOF1-207ENST00000504761 ZIK1Q3SY52 487 aaPredicted RBP13.9□□□□□ -0.19
TCOF1-207ENST00000504761 FAM26DQ5JW98 314 aa13.9□□□□□ -0.19
TCOF1-207ENST00000504761 SULT1C3Q6IMI6 304 aa13.9□□□□□ -0.19
TCOF1-207ENST00000504761 TIFABQ6ZNK6 161 aa13.9□□□□□ -0.19
TCOF1-207ENST00000504761 BEND5Q7L4P6 421 aa13.9□□□□□ -0.19
TCOF1-207ENST00000504761 PHTF2Q8N3S3 785 aa13.9□□□□□ -0.19
TCOF1-207ENST00000504761 MAGEE2Q8TD90 523 aaPredicted RBP13.9□□□□□ -0.19
TCOF1-207ENST00000504761 CDH22Q9UJ99 828 aa13.9□□□□□ -0.19
TCOF1-207ENST00000504761 BLOC1S6Q9UL45 172 aa13.9□□□□□ -0.19
TCOF1-207ENST00000504761 TMCC3Q9ULS5 477 aa13.9□□□□□ -0.19
TCOF1-207ENST00000504761 ZCWPW2A0A1B0GU75 182 aa13.89□□□□□ -0.19
TCOF1-207ENST00000504761 C16orf96A6NNT2 1141 aa13.89□□□□□ -0.19
TCOF1-207ENST00000504761 ENO4A6NNW6 628 aa13.89□□□□□ -0.19
TCOF1-207ENST00000504761 TTC34A8MYJ7 566 aa13.89□□□□□ -0.19
TCOF1-207ENST00000504761 ETV3P41162 512 aa13.89□□□□□ -0.19
TCOF1-207ENST00000504761 POLR2JP52435 117 aaKnown RBP13.89□□□□□ -0.19
TCOF1-207ENST00000504761 ZNF648Q5T619 568 aaPredicted RBP13.89□□□□□ -0.19
TCOF1-207ENST00000504761 FBXW8Q8N3Y1 598 aa13.89□□□□□ -0.19
TCOF1-207ENST00000504761 UTP15Q8TED0 518 aaKnown RBP13.89□□□□□ -0.19
TCOF1-207ENST00000504761 CLIP3Q96DZ5 547 aa13.89□□□□□ -0.19
TCOF1-207ENST00000504761 HIDE1A8MVS5 230 aa13.89□□□□□ -0.19
TCOF1-207ENST00000504761 AGTR2P50052 363 aa13.89□□□□□ -0.19
TCOF1-207ENST00000504761 NAA20P61599 178 aa13.89□□□□□ -0.19
TCOF1-207ENST00000504761 KHDC1Q4VXA5 237 aaKnown RBP13.89□□□□□ -0.19
TCOF1-207ENST00000504761 INO80DQ53TQ3 878 aaPredicted RBP13.89□□□□□ -0.19
TCOF1-207ENST00000504761 HID1Q8IV36 788 aa13.89□□□□□ -0.19
TCOF1-207ENST00000504761 BEND7Q8N7W2 519 aaPredicted RBP13.89□□□□□ -0.19
TCOF1-207ENST00000504761 OR9I1Q8NGQ6 314 aa13.89□□□□□ -0.19
TCOF1-207ENST00000504761 NUS1Q96E22 293 aa13.89□□□□□ -0.19
TCOF1-207ENST00000504761 BATF3Q9NR55 127 aa13.89□□□□□ -0.19
TCOF1-207ENST00000504761 SLC27A6Q9Y2P4 619 aa13.89□□□□□ -0.19
TCOF1-207ENST00000504761 CLOCKO15516 846 aa13.89□□□□□ -0.19
TCOF1-207ENST00000504761 PAPSS2O95340 614 aaPredicted RBP13.89□□□□□ -0.19
TCOF1-207ENST00000504761 SLC35E2BP0CK96 405 aa13.89□□□□□ -0.19
TCOF1-207ENST00000504761 FCGR1AP12314 374 aa13.89□□□□□ -0.19
TCOF1-207ENST00000504761 UBXN2BQ14CS0 331 aa13.89□□□□□ -0.19
TCOF1-207ENST00000504761 ZNF276Q8N554 614 aa13.89□□□□□ -0.19
TCOF1-207ENST00000504761 DACT3Q96B18 629 aaPredicted RBP13.89□□□□□ -0.19
TCOF1-207ENST00000504761 SLC46A2Q9BY10 475 aa13.89□□□□□ -0.19
TCOF1-207ENST00000504761 FBRSL1Q9HCM7 1045 aaKnown RBP13.89□□□□□ -0.19
TCOF1-207ENST00000504761 NLE1Q9NVX2 485 aaPredicted RBP13.89□□□□□ -0.19
TCOF1-207ENST00000504761 SOHLH2Q9NX45 425 aa13.89□□□□□ -0.19
TCOF1-207ENST00000504761 KLHL3Q9UH77 587 aa13.89□□□□□ -0.19
TCOF1-207ENST00000504761 ENTPD4Q9Y227 616 aa13.89□□□□□ -0.19
TCOF1-207ENST00000504761 SLC22A14Q9Y267 594 aa13.89□□□□□ -0.19
TCOF1-207ENST00000504761 TMEM98Q9Y2Y6 226 aa13.89□□□□□ -0.19
TCOF1-207ENST00000504761 SSR2P43308 183 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 PREPP48147 710 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 HSPA13P48723 471 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 SLC16A1P53985 500 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 GRSF1Q12849 480 aaKnown RBP eCLIP13.88□□□□□ -0.19
TCOF1-207ENST00000504761 PPP4R4Q6NUP7 873 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 TSPAN33Q86UF1 283 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 OSCP1Q8WVF1 389 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 SIPA1Q96FS4 1042 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 OSBPL6Q9BZF3 934 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 CRISPLD1Q9H336 500 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 DPEP2Q9H4A9 486 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 FBXL12Q9NXK8 326 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 SPO11Q9Y5K1 396 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 LRRC14BA6NHZ5 514 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 HEPACAM2A8MVW5 462 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 KERAO60938 352 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 RASSF9O75901 435 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 S1PR4O95977 384 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 TRBC1P01850 177 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 NEK2P51955 445 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 LPCAT4Q643R3 524 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 SMYD5Q6GMV2 418 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 RSPO2Q6UXX9 243 aaPredicted RBP13.88□□□□□ -0.19
TCOF1-207ENST00000504761 AMZ2Q86W34 360 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 PARGQ86W56 976 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 OLFM1Q99784 485 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 UGT2B28Q9BY64 529 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 ROGDIQ9GZN7 287 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 ATAD3AQ9NVI7 634 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 LRCH1Q9Y2L9 728 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 A0A0G2JN53 185 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 SAP18O00422 153 aaKnown RBP13.88□□□□□ -0.19
TCOF1-207ENST00000504761 FGF3P11487 239 aaPredicted RBP13.88□□□□□ -0.19
TCOF1-207ENST00000504761 CDKN1CP49918 316 aaPredicted RBP13.88□□□□□ -0.19
TCOF1-207ENST00000504761 DHCR24Q15392 516 aa13.88□□□□□ -0.19
TCOF1-207ENST00000504761 FGD3Q5JSP0 725 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms