RNA–Protein interactions for RNA: ENST00000504466.1

HMGCR-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 1,107 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-204ENST00000504466 TIMP1P01033 207 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 SHBGP04278 402 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 CFIP05156 583 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 CLTBP09497 229 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 LINC00271P0C7V0 271 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 HAPLN1P10915 354 aaPredicted RBP5.31□□□□□ -1.56
HMGCR-204ENST00000504466 STIP1P31948 543 aaKnown RBP5.31□□□□□ -1.56
HMGCR-204ENST00000504466 RFC2P35250 354 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 PTDSS1P48651 473 aaKnown RBP5.31□□□□□ -1.56
HMGCR-204ENST00000504466 HCAR3P49019 387 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 VPS41P49754 854 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 ZNF134P52741 427 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 AIF1P55008 147 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 EIF3EP60228 445 aaKnown RBP5.31□□□□□ -1.56
HMGCR-204ENST00000504466 DEFB103AP81534 67 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 CAV1Q03135 178 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 GBE1Q04446 702 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 GAD2Q05329 585 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 DEUP1Q05D60 604 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 XRCC4Q13426 336 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 KRT81Q14533 505 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 SLMAPQ14BN4 828 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 PAFAH1B3Q15102 231 aaKnown RBP5.31□□□□□ -1.56
HMGCR-204ENST00000504466 PFKFB4Q16877 469 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 P3H1Q32P28 736 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 PREPLQ4J6C6 727 aaPredicted RBP5.31□□□□□ -1.56
HMGCR-204ENST00000504466 CTXN3Q4LDR2 81 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 TNFAIP8L3Q5GJ75 292 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 PPP6R3Q5H9R7 873 aaPredicted RBP5.31□□□□□ -1.56
HMGCR-204ENST00000504466 ANKRD22Q5VYY1 191 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 FCRL6Q6DN72 434 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 PRSS55Q6UWB4 352 aaPredicted RBP5.31□□□□□ -1.56
HMGCR-204ENST00000504466 VSTM1Q6UX27 236 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 TMEM108Q6UXF1 575 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 C4orf50Q6ZRC1 276 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 TMPRSS9Q7Z410 1059 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 TMCO2Q7Z6W1 182 aaPredicted RBP5.31□□□□□ -1.56
HMGCR-204ENST00000504466 UBE2Q1Q7Z7E8 422 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 TAC4Q86UU9 113 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 SPATA2LQ8IUW3 424 aaPredicted RBP5.31□□□□□ -1.56
HMGCR-204ENST00000504466 LRRC43Q8N309 656 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 ZCCHC9Q8N567 271 aaKnown RBP5.31□□□□□ -1.56
HMGCR-204ENST00000504466 NAT8LQ8N9F0 302 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 FAM71DQ8N9W8 422 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 Q8NA96 180 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 BBOF1Q8ND07 529 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 DQX1Q8TE96 717 aaKnown RBP5.31□□□□□ -1.56
HMGCR-204ENST00000504466 NTN5Q8WTR8 489 aaPredicted RBP5.31□□□□□ -1.56
HMGCR-204ENST00000504466 UBLCP1Q8WVY7 318 aaPredicted RBP5.31□□□□□ -1.56
HMGCR-204ENST00000504466 CPT1BQ92523 772 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 PRCCQ92733 491 aaPredicted RBP5.31□□□□□ -1.56
HMGCR-204ENST00000504466 TRIM63Q969Q1 353 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 IGSF21Q96ID5 467 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 WDR83Q9BRX9 315 aaKnown RBP5.31□□□□□ -1.56
HMGCR-204ENST00000504466 TMEM109Q9BVC6 243 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 MAK16Q9BXY0 300 aaKnown RBP5.31□□□□□ -1.56
HMGCR-204ENST00000504466 MRPL9Q9BYD2 267 aaKnown RBP5.31□□□□□ -1.56
HMGCR-204ENST00000504466 MYLK2Q9H1R3 596 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 CDC42EP4Q9H3Q1 356 aaKnown RBP5.31□□□□□ -1.56
HMGCR-204ENST00000504466 SMOC2Q9H3U7 446 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 FAM83DQ9H4H8 585 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 ZNF768Q9H5H4 540 aaKnown RBP5.31□□□□□ -1.56
HMGCR-204ENST00000504466 C11orf49Q9H6J7 331 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 ARHGEF38Q9NXL2 777 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 RRN3Q9NYV6 651 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 LUZP4Q9P127 313 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 RCOR3Q9P2K3 495 aaPredicted RBP5.31□□□□□ -1.56
HMGCR-204ENST00000504466 MTRF1LQ9UGC7 380 aaKnown RBP5.31□□□□□ -1.56
HMGCR-204ENST00000504466 ASIC3Q9UHC3 531 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 ANAPC5Q9UJX4 755 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 ADAM21Q9UKJ8 722 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 ZMYND8Q9ULU4 1186 aaPredicted RBP5.31□□□□□ -1.56
HMGCR-204ENST00000504466 NEU3Q9UQ49 428 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 SCML2Q9UQR0 700 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 SNX10Q9Y5X0 201 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 ANAPC1Q9H1A4 1944 aa5.31□□□□□ -1.56
HMGCR-204ENST00000504466 SF3B1O75533 1304 aaKnown RBP eCLIP5.3□□□□□ -1.56
HMGCR-204ENST00000504466 SYNJ2BP-COX16A0A087WUM0 186 aa5.3□□□□□ -1.56
HMGCR-204ENST00000504466 CENPVL1A0A0U1RR11 272 aa5.3□□□□□ -1.56
HMGCR-204ENST00000504466 A0A1W2PS29 197 aa5.3□□□□□ -1.56
HMGCR-204ENST00000504466 GAGE12BA1L429 117 aa5.3□□□□□ -1.56
HMGCR-204ENST00000504466 WDR27A2RRH5 827 aa5.3□□□□□ -1.56
HMGCR-204ENST00000504466 GAGE12HA6NDE8 117 aa5.3□□□□□ -1.56
HMGCR-204ENST00000504466 GOLGA8KD6RF30 607 aa5.3□□□□□ -1.56
HMGCR-204ENST00000504466 E7ESA3 106 aa5.3□□□□□ -1.56
HMGCR-204ENST00000504466 SGK1O00141 431 aa5.3□□□□□ -1.56
HMGCR-204ENST00000504466 ALOX15BO15296 676 aa5.3□□□□□ -1.56
HMGCR-204ENST00000504466 POLR3GO15318 223 aaPredicted RBP5.3□□□□□ -1.56
HMGCR-204ENST00000504466 IRAK2O43187 625 aa5.3□□□□□ -1.56
HMGCR-204ENST00000504466 MFSD11O43934 449 aa5.3□□□□□ -1.56
HMGCR-204ENST00000504466 TLR5O60602 858 aa5.3□□□□□ -1.56
HMGCR-204ENST00000504466 TMEM63AO94886 807 aa5.3□□□□□ -1.56
HMGCR-204ENST00000504466 TTC4O95801 387 aa5.3□□□□□ -1.56
HMGCR-204ENST00000504466 F9P00740 461 aa5.3□□□□□ -1.56
HMGCR-204ENST00000504466 ELANEP08246 267 aa5.3□□□□□ -1.56
HMGCR-204ENST00000504466 ZDHHC11BP0C7U3 371 aa5.3□□□□□ -1.56
HMGCR-204ENST00000504466 CSF2RAP15509 400 aa5.3□□□□□ -1.56
HMGCR-204ENST00000504466 LAG3P18627 525 aa5.3□□□□□ -1.56
HMGCR-204ENST00000504466 RBL1P28749 1068 aa5.3□□□□□ -1.56
HMGCR-204ENST00000504466 MAGEA6P43360 314 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms