RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 NEFLP07196 543 aa12.17□□□□□ -0.46
LSM6-204ENST00000504181 UMODP07911 640 aa12.17□□□□□ -0.46
LSM6-204ENST00000504181 CBSLP0DN79 551 aa12.17□□□□□ -0.46
LSM6-204ENST00000504181 IL4RP24394 825 aa12.17□□□□□ -0.46
LSM6-204ENST00000504181 CBSP35520 551 aa12.17□□□□□ -0.46
LSM6-204ENST00000504181 MEOX1P50221 254 aa12.17□□□□□ -0.46
LSM6-204ENST00000504181 TPI1P60174 286 aa12.17□□□□□ -0.46
LSM6-204ENST00000504181 MAXP61244 160 aa12.17□□□□□ -0.46
LSM6-204ENST00000504181 ADAM8P78325 824 aa12.17□□□□□ -0.46
LSM6-204ENST00000504181 IL10RBQ08334 325 aa12.17□□□□□ -0.46
LSM6-204ENST00000504181 HENMT1Q5T8I9 393 aaKnown RBP12.17□□□□□ -0.46
LSM6-204ENST00000504181 C1orf189Q5VU69 101 aa12.17□□□□□ -0.46
LSM6-204ENST00000504181 CLEC9AQ6UXN8 241 aa12.17□□□□□ -0.46
LSM6-204ENST00000504181 PGBD5Q8N414 524 aa12.17□□□□□ -0.46
LSM6-204ENST00000504181 DNAJB8Q8NHS0 232 aa12.17□□□□□ -0.46
LSM6-204ENST00000504181 CENPIQ92674 756 aaPredicted RBP12.17□□□□□ -0.46
LSM6-204ENST00000504181 NINJ1Q92982 152 aa12.17□□□□□ -0.46
LSM6-204ENST00000504181 ARSGQ96EG1 525 aa12.17□□□□□ -0.46
LSM6-204ENST00000504181 ZNF559Q9BR84 538 aa12.17□□□□□ -0.46
LSM6-204ENST00000504181 GPATCH2LQ9NWQ4 482 aa12.17□□□□□ -0.46
LSM6-204ENST00000504181 RMND1Q9NWS8 449 aa12.17□□□□□ -0.46
LSM6-204ENST00000504181 HRASLS2Q9NWW9 162 aa12.17□□□□□ -0.46
LSM6-204ENST00000504181 NDOR1Q9UHB4 597 aa12.17□□□□□ -0.46
LSM6-204ENST00000504181 CDYLQ9Y232 598 aa12.17□□□□□ -0.46
LSM6-204ENST00000504181 WDR37Q9Y2I8 494 aa12.17□□□□□ -0.46
LSM6-204ENST00000504181 FOXN3O00409 490 aaPredicted RBP12.16□□□□□ -0.46
LSM6-204ENST00000504181 KMOO15229 486 aa12.16□□□□□ -0.46
LSM6-204ENST00000504181 KLHL18O94889 574 aa12.16□□□□□ -0.46
LSM6-204ENST00000504181 CLDN7O95471 211 aa12.16□□□□□ -0.46
LSM6-204ENST00000504181 CYP11B1P15538 503 aa12.16□□□□□ -0.46
LSM6-204ENST00000504181 IDSP22304 550 aa12.16□□□□□ -0.46
LSM6-204ENST00000504181 ADSLP30566 484 aaPredicted RBP12.16□□□□□ -0.46
LSM6-204ENST00000504181 RFC1P35251 1148 aaPredicted RBP12.16□□□□□ -0.46
LSM6-204ENST00000504181 KPNA2P52292 529 aaKnown RBP12.16□□□□□ -0.46
LSM6-204ENST00000504181 STX17P56962 302 aa12.16□□□□□ -0.46
LSM6-204ENST00000504181 ARG2P78540 354 aa12.16□□□□□ -0.46
LSM6-204ENST00000504181 MFAP5Q13361 173 aa12.16□□□□□ -0.46
LSM6-204ENST00000504181 INAQ16352 499 aa12.16□□□□□ -0.46
LSM6-204ENST00000504181 AGAP9Q5VTM2 703 aa12.16□□□□□ -0.46
LSM6-204ENST00000504181 ISLR2Q6UXK2 745 aa12.16□□□□□ -0.46
LSM6-204ENST00000504181 LRRTM4Q86VH4 590 aa12.16□□□□□ -0.46
LSM6-204ENST00000504181 OOSP2Q86WS3 158 aa12.16□□□□□ -0.46
LSM6-204ENST00000504181 ARHGAP12Q8IWW6 846 aa12.16□□□□□ -0.46
LSM6-204ENST00000504181 PTERQ96BW5 349 aa12.16□□□□□ -0.46
LSM6-204ENST00000504181 C17orf62Q9BQA9 187 aa12.16□□□□□ -0.46
LSM6-204ENST00000504181 TIMM29Q9BSF4 260 aa12.16□□□□□ -0.46
LSM6-204ENST00000504181 LHPPQ9H008 270 aa12.16□□□□□ -0.46
LSM6-204ENST00000504181 DTLQ9NZJ0 730 aa12.16□□□□□ -0.46
LSM6-204ENST00000504181 CFAP45Q9UL16 551 aa12.16□□□□□ -0.46
LSM6-204ENST00000504181 FZD10Q9ULW2 581 aa12.16□□□□□ -0.46
LSM6-204ENST00000504181 MEMO1Q9Y316 297 aa12.16□□□□□ -0.46
LSM6-204ENST00000504181 A0A0J9YYE9 177 aa12.15□□□□□ -0.46
LSM6-204ENST00000504181 SLC9B1P1A6NJY1 282 aa12.15□□□□□ -0.46
LSM6-204ENST00000504181 E7EQ34 232 aa12.15□□□□□ -0.46
LSM6-204ENST00000504181 K7ELQ4 463 aaPredicted RBP12.15□□□□□ -0.46
LSM6-204ENST00000504181 WISP2O76076 250 aa12.15□□□□□ -0.46
LSM6-204ENST00000504181 TRBC1P01850 177 aa12.15□□□□□ -0.46
LSM6-204ENST00000504181 HALP42357 657 aa12.15□□□□□ -0.46
LSM6-204ENST00000504181 NAA35Q5VZE5 725 aa12.15□□□□□ -0.46
LSM6-204ENST00000504181 ARMC6Q6NXE6 501 aa12.15□□□□□ -0.46
LSM6-204ENST00000504181 WASH2PQ6VEQ5 465 aa12.15□□□□□ -0.46
LSM6-204ENST00000504181 ADGRG6Q86SQ4 1221 aa12.15□□□□□ -0.46
LSM6-204ENST00000504181 NDUFAF2Q8N183 169 aa12.15□□□□□ -0.46
LSM6-204ENST00000504181 CA5BP1Q8WTZ4 195 aa12.15□□□□□ -0.46
LSM6-204ENST00000504181 THOC3Q96J01 351 aaKnown RBP12.15□□□□□ -0.46
LSM6-204ENST00000504181 LIME1Q9H400 295 aa12.15□□□□□ -0.46
LSM6-204ENST00000504181 CBX8Q9HC52 389 aa12.15□□□□□ -0.46
LSM6-204ENST00000504181 ABI3Q9P2A4 366 aa12.15□□□□□ -0.46
LSM6-204ENST00000504181 IFT80Q9P2H3 777 aaPredicted RBP12.15□□□□□ -0.46
LSM6-204ENST00000504181 SERTAD3Q9UJW9 196 aa12.15□□□□□ -0.46
LSM6-204ENST00000504181 OR6C74A6NCV1 312 aa12.14□□□□□ -0.47
LSM6-204ENST00000504181 PSMA7O14818 248 aa12.14□□□□□ -0.47
LSM6-204ENST00000504181 CHUKO15111 745 aa12.14□□□□□ -0.47
LSM6-204ENST00000504181 SLC25A14O95258 325 aaPredicted RBP12.14□□□□□ -0.47
LSM6-204ENST00000504181 F13A1P00488 732 aa12.14□□□□□ -0.47
LSM6-204ENST00000504181 CRYABP02511 175 aaKnown RBP12.14□□□□□ -0.47
LSM6-204ENST00000504181 HBQ1P09105 142 aa12.14□□□□□ -0.47
LSM6-204ENST00000504181 CDH3P22223 829 aa12.14□□□□□ -0.47
LSM6-204ENST00000504181 HSPA9P38646 679 aaKnown RBP12.14□□□□□ -0.47
LSM6-204ENST00000504181 PREPP48147 710 aa12.14□□□□□ -0.47
LSM6-204ENST00000504181 LMAN1P49257 510 aa12.14□□□□□ -0.47
LSM6-204ENST00000504181 EPHB1P54762 984 aa12.14□□□□□ -0.47
LSM6-204ENST00000504181 NOMO3P69849 1222 aa12.14□□□□□ -0.47
LSM6-204ENST00000504181 DSG2Q14126 1118 aa12.14□□□□□ -0.47
LSM6-204ENST00000504181 NPWQ8N729 165 aa12.14□□□□□ -0.47
LSM6-204ENST00000504181 ANKRD20A12PQ8NF67 263 aa12.14□□□□□ -0.47
LSM6-204ENST00000504181 SDCCAG3Q96C92 435 aa12.14□□□□□ -0.47
LSM6-204ENST00000504181 MAGED4Q96JG8 741 aa12.14□□□□□ -0.47
LSM6-204ENST00000504181 C18orf12Q96KH6 178 aa12.14□□□□□ -0.47
LSM6-204ENST00000504181 GOLPH3LQ9H4A5 285 aa12.14□□□□□ -0.47
LSM6-204ENST00000504181 FAM83DQ9H4H8 585 aa12.14□□□□□ -0.47
LSM6-204ENST00000504181 TRIM39Q9HCM9 518 aa12.14□□□□□ -0.47
LSM6-204ENST00000504181 PLA2G3Q9NZ20 509 aa12.14□□□□□ -0.47
LSM6-204ENST00000504181 ST6GALNAC2Q9UJ37 374 aa12.14□□□□□ -0.47
LSM6-204ENST00000504181 PSMD13Q9UNM6 376 aa12.14□□□□□ -0.47
LSM6-204ENST00000504181 FHOD1Q9Y613 1164 aa12.14□□□□□ -0.47
LSM6-204ENST00000504181 TLN2Q9Y4G6 2542 aa12.14□□□□□ -0.47
LSM6-204ENST00000504181 PHF3Q92576 2039 aaKnown RBP12.13□□□□□ -0.47
LSM6-204ENST00000504181 TRAV17A0A0B4J275 112 aa12.13□□□□□ -0.47
LSM6-204ENST00000504181 FAM237AA0A1B0GTK4 181 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms