RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 GPR18Q14330 331 aa11.72□□□□□ -0.53
MED28-203ENST00000503945 IL11RAQ14626 422 aa11.72□□□□□ -0.53
MED28-203ENST00000503945 RPE65Q16518 533 aa11.72□□□□□ -0.53
MED28-203ENST00000503945 CACHD1Q5VU97 1274 aa11.72□□□□□ -0.53
MED28-203ENST00000503945 AADACL2Q6P093 401 aa11.72□□□□□ -0.53
MED28-203ENST00000503945 ARHGEF18Q6ZSZ5 1173 aa11.72□□□□□ -0.53
MED28-203ENST00000503945 CFAP206Q8IYR0 622 aa11.72□□□□□ -0.53
MED28-203ENST00000503945 ACRBPQ8NEB7 543 aa11.72□□□□□ -0.53
MED28-203ENST00000503945 HEXDCQ8WVB3 486 aa11.72□□□□□ -0.53
MED28-203ENST00000503945 ZFPM2Q8WW38 1151 aa11.72□□□□□ -0.53
MED28-203ENST00000503945 ALG3Q92685 438 aa11.72□□□□□ -0.53
MED28-203ENST00000503945 ALS2CR12Q96Q35 445 aa11.72□□□□□ -0.53
MED28-203ENST00000503945 FAM118BQ9BPY3 351 aa11.72□□□□□ -0.53
MED28-203ENST00000503945 TBL1YQ9BQ87 522 aa11.72□□□□□ -0.53
MED28-203ENST00000503945 SPRY4Q9C004 299 aa11.72□□□□□ -0.53
MED28-203ENST00000503945 GPN2Q9H9Y4 310 aaPredicted RBP11.72□□□□□ -0.53
MED28-203ENST00000503945 OGFRQ9NZT2 677 aa11.72□□□□□ -0.53
MED28-203ENST00000503945 EPHA6Q9UF33 1036 aa11.72□□□□□ -0.53
MED28-203ENST00000503945 PSMD13Q9UNM6 376 aa11.72□□□□□ -0.53
MED28-203ENST00000503945 KCTD3Q9Y597 815 aa11.72□□□□□ -0.53
MED28-203ENST00000503945 COLEC10Q9Y6Z7 277 aa11.72□□□□□ -0.53
MED28-203ENST00000503945 MGAT4DA6NG13 374 aa11.71□□□□□ -0.53
MED28-203ENST00000503945 CFAP99D6REC4 459 aa11.71□□□□□ -0.53
MED28-203ENST00000503945 STK17BO94768 372 aa11.71□□□□□ -0.53
MED28-203ENST00000503945 CCNYL3P0C7X3 344 aa11.71□□□□□ -0.53
MED28-203ENST00000503945 LIFP15018 202 aa11.71□□□□□ -0.53
MED28-203ENST00000503945 GFERP55789 205 aa11.71□□□□□ -0.53
MED28-203ENST00000503945 TMPRSS15P98073 1019 aa11.71□□□□□ -0.53
MED28-203ENST00000503945 SRSF1Q07955 248 aaKnown RBP eCLIP11.71□□□□□ -0.534e-7■□□□□ 8.4
MED28-203ENST00000503945 NFE2L1Q14494 772 aa11.71□□□□□ -0.53
MED28-203ENST00000503945 SPARCL1Q14515 664 aa11.71□□□□□ -0.53
MED28-203ENST00000503945 KRT33BQ14525 404 aa11.71□□□□□ -0.53
MED28-203ENST00000503945 GSE1Q14687 1217 aa11.71□□□□□ -0.53
MED28-203ENST00000503945 IRGCQ6NXR0 463 aa11.71□□□□□ -0.53
MED28-203ENST00000503945 CYB5D1Q6P9G0 228 aa11.71□□□□□ -0.53
MED28-203ENST00000503945 DET1Q7L5Y6 550 aa11.71□□□□□ -0.53
MED28-203ENST00000503945 RNF10Q8N5U6 811 aaKnown RBP11.71□□□□□ -0.53
MED28-203ENST00000503945 FAM71DQ8N9W8 422 aa11.71□□□□□ -0.53
MED28-203ENST00000503945 OR2L2Q8NH16 312 aa11.71□□□□□ -0.53
MED28-203ENST00000503945 UBE2Q2Q8WVN8 375 aa11.71□□□□□ -0.53
MED28-203ENST00000503945 ULK4Q96C45 1275 aa11.71□□□□□ -0.53
MED28-203ENST00000503945 C19orf43Q9BQ61 176 aa11.71□□□□□ -0.53
MED28-203ENST00000503945 SLC12A9Q9BXP2 914 aa11.71□□□□□ -0.53
MED28-203ENST00000503945 RAB33BQ9H082 229 aa11.71□□□□□ -0.53
MED28-203ENST00000503945 ARNT2Q9HBZ2 717 aa11.71□□□□□ -0.53
MED28-203ENST00000503945 APMAPQ9HDC9 416 aa11.71□□□□□ -0.53
MED28-203ENST00000503945 SMOXQ9NWM0 555 aa11.71□□□□□ -0.53
MED28-203ENST00000503945 GEMIN8Q9NWZ8 242 aaKnown RBP11.71□□□□□ -0.53
MED28-203ENST00000503945 CRLS1Q9UJA2 301 aa11.71□□□□□ -0.53
MED28-203ENST00000503945 TLN1Q9Y490 2541 aaKnown RBP11.71□□□□□ -0.53
MED28-203ENST00000503945 DOPEY2Q9Y3R5 2298 aa11.7□□□□□ -0.54
MED28-203ENST00000503945 MN1Q10571 1320 aaPredicted RBP11.7□□□□□ -0.54
MED28-203ENST00000503945 ZNF891A8MT65 544 aaPredicted RBP11.7□□□□□ -0.54
MED28-203ENST00000503945 GOLGA6L6A8MZA4 724 aa11.7□□□□□ -0.54
MED28-203ENST00000503945 GAPDHSO14556 408 aaPredicted RBP11.7□□□□□ -0.54
MED28-203ENST00000503945 GPR39O43194 453 aa11.7□□□□□ -0.54
MED28-203ENST00000503945 POLBP06746 335 aa11.7□□□□□ -0.54
MED28-203ENST00000503945 ATP1B2P14415 290 aaPredicted RBP11.7□□□□□ -0.54
MED28-203ENST00000503945 ITGALP20701 1170 aa11.7□□□□□ -0.54
MED28-203ENST00000503945 PBLDP30039 288 aaPredicted RBP11.7□□□□□ -0.54
MED28-203ENST00000503945 STIP1P31948 543 aaKnown RBP11.7□□□□□ -0.54
MED28-203ENST00000503945 CA5AP35218 305 aa11.7□□□□□ -0.54
MED28-203ENST00000503945 LEPRP48357 1165 aaKnown RBP11.7□□□□□ -0.54
MED28-203ENST00000503945 ARL4DP49703 201 aa11.7□□□□□ -0.54
MED28-203ENST00000503945 MC1RQ01726 317 aa11.7□□□□□ -0.54
MED28-203ENST00000503945 ABHD18Q0P651 414 aa11.7□□□□□ -0.54
MED28-203ENST00000503945 MSLNQ13421 630 aaPredicted RBP11.7□□□□□ -0.54
MED28-203ENST00000503945 OLIG2Q13516 323 aa11.7□□□□□ -0.54
MED28-203ENST00000503945 PLCL1Q15111 1095 aa11.7□□□□□ -0.54
MED28-203ENST00000503945 GPR33Q49SQ1 333 aa11.7□□□□□ -0.54
MED28-203ENST00000503945 ARMC6Q6NXE6 501 aa11.7□□□□□ -0.54
MED28-203ENST00000503945 ZNF449Q6P9G9 518 aa11.7□□□□□ -0.54
MED28-203ENST00000503945 BORAQ6PGQ7 559 aa11.7□□□□□ -0.54
MED28-203ENST00000503945 FAM83HQ6ZRV2 1179 aaPredicted RBP11.7□□□□□ -0.54
MED28-203ENST00000503945 FAM92BQ6ZTR7 304 aa11.7□□□□□ -0.54
MED28-203ENST00000503945 SNX20Q7Z614 316 aa11.7□□□□□ -0.54
MED28-203ENST00000503945 BPHLQ86WA6 291 aaPredicted RBP11.7□□□□□ -0.54
MED28-203ENST00000503945 GAS2L3Q86XJ1 694 aa11.7□□□□□ -0.54
MED28-203ENST00000503945 RASGRP3Q8IV61 690 aa11.7□□□□□ -0.54
MED28-203ENST00000503945 ESX1Q8N693 406 aa11.7□□□□□ -0.54
MED28-203ENST00000503945 SPC24Q8NBT2 197 aa11.7□□□□□ -0.54
MED28-203ENST00000503945 KLHL6Q8WZ60 621 aa11.7□□□□□ -0.54
MED28-203ENST00000503945 CATSPER2Q96P56 530 aa11.7□□□□□ -0.54
MED28-203ENST00000503945 OR6C1Q96RD1 312 aa11.7□□□□□ -0.54
MED28-203ENST00000503945 INSM2Q96T92 566 aaPredicted RBP11.7□□□□□ -0.54
MED28-203ENST00000503945 GORASP1Q9BQQ3 440 aa11.7□□□□□ -0.54
MED28-203ENST00000503945 CCM2Q9BSQ5 444 aa11.7□□□□□ -0.54
MED28-203ENST00000503945 ULBP3Q9BZM4 244 aa11.7□□□□□ -0.54
MED28-203ENST00000503945 SLC25A18Q9H1K4 315 aa11.7□□□□□ -0.54
MED28-203ENST00000503945 ZNF768Q9H5H4 540 aaKnown RBP11.7□□□□□ -0.54
MED28-203ENST00000503945 FAM96AQ9H5X1 160 aa11.7□□□□□ -0.54
MED28-203ENST00000503945 PDE7BQ9NP56 450 aa11.7□□□□□ -0.54
MED28-203ENST00000503945 HRASLS2Q9NWW9 162 aa11.7□□□□□ -0.54
MED28-203ENST00000503945 FKBPLQ9UIM3 349 aa11.7□□□□□ -0.54
MED28-203ENST00000503945 TMEM184BQ9Y519 407 aaPredicted RBP11.7□□□□□ -0.54
MED28-203ENST00000503945 UBR5O95071 2799 aaPredicted RBP11.7□□□□□ -0.54
MED28-203ENST00000503945 UBA6A0AVT1 1052 aaPredicted RBP11.69□□□□□ -0.54
MED28-203ENST00000503945 AGAP14A8MT82 685 aa11.69□□□□□ -0.54
MED28-203ENST00000503945 KIF1CO43896 1103 aaKnown RBP11.69□□□□□ -0.54
MED28-203ENST00000503945 FTCDO95954 541 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms