RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 ZBTB20Q9HC78 741 aaPredicted RBP15.42■□□□□ 0.06
PDLIM7-210ENST00000503827 SYTL2Q9HCH5 934 aa15.42■□□□□ 0.06
PDLIM7-210ENST00000503827 RAD18Q9NS91 495 aa15.42■□□□□ 0.06
PDLIM7-210ENST00000503827 PCM1Q15154 2024 aa15.42■□□□□ 0.06
PDLIM7-210ENST00000503827 PKDREJQ9NTG1 2253 aa15.42■□□□□ 0.06
PDLIM7-210ENST00000503827 CCDC168Q8NDH2 2452 aa15.41■□□□□ 0.06
PDLIM7-210ENST00000503827 A0A1W2PQJ5 194 aa15.41■□□□□ 0.06
PDLIM7-210ENST00000503827 EPHB6O15197 1021 aa15.41■□□□□ 0.06
PDLIM7-210ENST00000503827 KCNJ13O60928 360 aa15.41■□□□□ 0.06
PDLIM7-210ENST00000503827 LCA5LO95447 670 aa15.41■□□□□ 0.06
PDLIM7-210ENST00000503827 EEF1GP26641 437 aaKnown RBP15.41■□□□□ 0.06
PDLIM7-210ENST00000503827 TSFMP43897 325 aaKnown RBP15.41■□□□□ 0.06
PDLIM7-210ENST00000503827 ZNF165P49910 485 aa15.41■□□□□ 0.06
PDLIM7-210ENST00000503827 SOX8P57073 446 aa15.41■□□□□ 0.06
PDLIM7-210ENST00000503827 GTF2H3Q13889 308 aa15.41■□□□□ 0.06
PDLIM7-210ENST00000503827 RPE65Q16518 533 aa15.41■□□□□ 0.06
PDLIM7-210ENST00000503827 CAMK4Q16566 473 aa15.41■□□□□ 0.06
PDLIM7-210ENST00000503827 TCP11X2Q5H9J9 407 aa15.41■□□□□ 0.06
PDLIM7-210ENST00000503827 PLEKHA7Q6IQ23 1121 aa15.41■□□□□ 0.06
PDLIM7-210ENST00000503827 SPNS3Q6ZMD2 512 aa15.41■□□□□ 0.06
PDLIM7-210ENST00000503827 SPOCD1Q6ZMY3 1216 aa15.41■□□□□ 0.06
PDLIM7-210ENST00000503827 C11orf96Q7Z7L8 435 aa15.41■□□□□ 0.06
PDLIM7-210ENST00000503827 TRAPPC5Q8IUR0 188 aa15.41■□□□□ 0.06
PDLIM7-210ENST00000503827 PPP4R1Q8TF05 950 aa15.41■□□□□ 0.06
PDLIM7-210ENST00000503827 C17orf62Q9BQA9 187 aa15.41■□□□□ 0.06
PDLIM7-210ENST00000503827 RBM22Q9NW64 420 aaKnown RBP eCLIP15.41■□□□□ 0.06
PDLIM7-210ENST00000503827 TAB2Q9NYJ8 693 aa15.41■□□□□ 0.06
PDLIM7-210ENST00000503827 AMACRQ9UHK6 382 aa15.41■□□□□ 0.06
PDLIM7-210ENST00000503827 TMEM191CA6NGB0 347 aa15.4■□□□□ 0.06
PDLIM7-210ENST00000503827 TMEM150CB9EJG8 249 aa15.4■□□□□ 0.06
PDLIM7-210ENST00000503827 DDX3YO15523 660 aaKnown RBP15.4■□□□□ 0.06
PDLIM7-210ENST00000503827 BPIP17213 487 aa15.4■□□□□ 0.06
PDLIM7-210ENST00000503827 CDC16Q13042 620 aa15.4■□□□□ 0.06
PDLIM7-210ENST00000503827 TESK1Q15569 626 aa15.4■□□□□ 0.06
PDLIM7-210ENST00000503827 SMTNL2Q2TAL5 461 aa15.4■□□□□ 0.06
PDLIM7-210ENST00000503827 VWA2Q5GFL6 755 aa15.4■□□□□ 0.06
PDLIM7-210ENST00000503827 TIGD7Q6NT04 549 aaPredicted RBP15.4■□□□□ 0.06
PDLIM7-210ENST00000503827 PPP1R2P3Q6NXS1 205 aa15.4■□□□□ 0.06
PDLIM7-210ENST00000503827 FBXO38Q6PIJ6 1188 aa15.4■□□□□ 0.06
PDLIM7-210ENST00000503827 OR1L3Q8NH93 324 aa15.4■□□□□ 0.06
PDLIM7-210ENST00000503827 ARRDC2Q8TBH0 407 aa15.4■□□□□ 0.06
PDLIM7-210ENST00000503827 HSPH1Q92598 858 aa15.4■□□□□ 0.06
PDLIM7-210ENST00000503827 RELTQ969Z4 430 aa15.4■□□□□ 0.06
PDLIM7-210ENST00000503827 ZNF653Q96CK0 615 aa15.4■□□□□ 0.06
PDLIM7-210ENST00000503827 EID2BQ96D98 161 aa15.4■□□□□ 0.06
PDLIM7-210ENST00000503827 AGAP3Q96P47 875 aa15.4■□□□□ 0.06
PDLIM7-210ENST00000503827 ADGRE3Q9BY15 652 aa15.4■□□□□ 0.06
PDLIM7-210ENST00000503827 ATP13A2Q9NQ11 1180 aa15.4■□□□□ 0.06
PDLIM7-210ENST00000503827 SAMSN1Q9NSI8 373 aaKnown RBP15.4■□□□□ 0.06
PDLIM7-210ENST00000503827 P4HTMQ9NXG6 502 aa15.4■□□□□ 0.06
PDLIM7-210ENST00000503827 NFKBIL1Q9UBC1 381 aaPredicted RBP15.4■□□□□ 0.06
PDLIM7-210ENST00000503827 SERTAD3Q9UJW9 196 aa15.4■□□□□ 0.06
PDLIM7-210ENST00000503827 PSMD13Q9UNM6 376 aa15.4■□□□□ 0.06
PDLIM7-210ENST00000503827 CSAG2Q9Y5P2 127 aa15.4■□□□□ 0.06
PDLIM7-210ENST00000503827 DOCK10Q96BY6 2186 aa15.4■□□□□ 0.06
PDLIM7-210ENST00000503827 ANKRD12Q6UB98 2062 aa15.39■□□□□ 0.05
PDLIM7-210ENST00000503827 OR6C74A6NCV1 312 aa15.39■□□□□ 0.05
PDLIM7-210ENST00000503827 MATN3O15232 486 aa15.39■□□□□ 0.05
PDLIM7-210ENST00000503827 ATMINO43313 823 aaPredicted RBP15.39■□□□□ 0.05
PDLIM7-210ENST00000503827 GADD45BO75293 160 aaPredicted RBP15.39■□□□□ 0.05
PDLIM7-210ENST00000503827 KLF7O75840 302 aaPredicted RBP15.39■□□□□ 0.05
PDLIM7-210ENST00000503827 HBQ1P09105 142 aa15.39■□□□□ 0.05
PDLIM7-210ENST00000503827 CDH3P22223 829 aa15.39■□□□□ 0.05
PDLIM7-210ENST00000503827 HTR1EP28566 365 aa15.39■□□□□ 0.05
PDLIM7-210ENST00000503827 FOLR3P41439 243 aa15.39■□□□□ 0.05
PDLIM7-210ENST00000503827 PREPP48147 710 aa15.39■□□□□ 0.05
PDLIM7-210ENST00000503827 ARCN1P48444 511 aaKnown RBP15.39■□□□□ 0.05
PDLIM7-210ENST00000503827 KPNA2P52292 529 aaKnown RBP15.39■□□□□ 0.05
PDLIM7-210ENST00000503827 NIPAL4Q0D2K0 466 aa15.39■□□□□ 0.05
PDLIM7-210ENST00000503827 TMEM115Q12893 351 aaPredicted RBP15.39■□□□□ 0.05
PDLIM7-210ENST00000503827 HIF1AQ16665 826 aa15.39■□□□□ 0.05
PDLIM7-210ENST00000503827 KHDC1Q4VXA5 237 aaKnown RBP15.39■□□□□ 0.05
PDLIM7-210ENST00000503827 BOLA3Q53S33 107 aa15.39■□□□□ 0.05
PDLIM7-210ENST00000503827 FKBP15Q5T1M5 1219 aa15.39■□□□□ 0.05
PDLIM7-210ENST00000503827 MLIPQ5VWP3 458 aa15.39■□□□□ 0.05
PDLIM7-210ENST00000503827 FCRL6Q6DN72 434 aa15.39■□□□□ 0.05
PDLIM7-210ENST00000503827 BNC2Q6ZN30 1099 aaPredicted RBP15.39■□□□□ 0.05
PDLIM7-210ENST00000503827 AMZ2Q86W34 360 aa15.39■□□□□ 0.05
PDLIM7-210ENST00000503827 DNAJB14Q8TBM8 379 aa15.39■□□□□ 0.05
PDLIM7-210ENST00000503827 ITLN2Q8WWU7 325 aaPredicted RBP15.39■□□□□ 0.05
PDLIM7-210ENST00000503827 MAML1Q92585 1016 aa15.39■□□□□ 0.05
PDLIM7-210ENST00000503827 TTC25Q96NG3 672 aa15.39■□□□□ 0.05
PDLIM7-210ENST00000503827 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.39■□□□□ 0.05
PDLIM7-210ENST00000503827 IMP3Q9NV31 184 aaKnown RBP15.39■□□□□ 0.05
PDLIM7-210ENST00000503827 SUCOQ9UBS9 1254 aaKnown RBP15.39■□□□□ 0.05
PDLIM7-210ENST00000503827 GPN3Q9UHW5 284 aaPredicted RBP15.39■□□□□ 0.05
PDLIM7-210ENST00000503827 PTRH2Q9Y3E5 179 aaKnown RBP15.39■□□□□ 0.05
PDLIM7-210ENST00000503827 AKAP9Q99996 3911 aa15.39■□□□□ 0.05
PDLIM7-210ENST00000503827 SLC9B1P1A6NJY1 282 aa15.38■□□□□ 0.05
PDLIM7-210ENST00000503827 E7EQ34 232 aa15.38■□□□□ 0.05
PDLIM7-210ENST00000503827 MAP3K7O43318 606 aa15.38■□□□□ 0.05
PDLIM7-210ENST00000503827 DIAPH2O60879 1101 aa15.38■□□□□ 0.05
PDLIM7-210ENST00000503827 SLC4A1P02730 911 aa15.38■□□□□ 0.05
PDLIM7-210ENST00000503827 TPM2P07951 284 aa15.38■□□□□ 0.05
PDLIM7-210ENST00000503827 CD63P08962 238 aa15.38■□□□□ 0.05
PDLIM7-210ENST00000503827 MTHFD1P11586 935 aaKnown RBP15.38■□□□□ 0.05
PDLIM7-210ENST00000503827 PCK1P35558 622 aa15.38■□□□□ 0.05
PDLIM7-210ENST00000503827 DMPKQ09013 629 aa15.38■□□□□ 0.05
PDLIM7-210ENST00000503827 PRKAA1Q13131 559 aa15.38■□□□□ 0.05
PDLIM7-210ENST00000503827 XRCC4Q13426 336 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms