RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 ACADVLP49748 655 aa21■□□□□ 0.95
UBE2D3-216ENST00000503742 HENMT1Q5T8I9 393 aaKnown RBP21■□□□□ 0.95
UBE2D3-216ENST00000503742 GET4Q7L5D6 327 aaPredicted RBP21■□□□□ 0.95
UBE2D3-216ENST00000503742 TECPR1Q7Z6L1 1165 aa21■□□□□ 0.95
UBE2D3-216ENST00000503742 GPR149Q86SP6 731 aa21■□□□□ 0.95
UBE2D3-216ENST00000503742 PGAM4Q8N0Y7 254 aa21■□□□□ 0.95
UBE2D3-216ENST00000503742 NKX2-4Q9H2Z4 354 aa21■□□□□ 0.95
UBE2D3-216ENST00000503742 NSUN3Q9H649 340 aaKnown RBP21■□□□□ 0.95
UBE2D3-216ENST00000503742 HPS4Q9NQG7 708 aa21■□□□□ 0.95
UBE2D3-216ENST00000503742 NDE1Q9NXR1 346 aa21■□□□□ 0.95
UBE2D3-216ENST00000503742 STX18Q9P2W9 335 aaKnown RBP21■□□□□ 0.95
UBE2D3-216ENST00000503742 BTRCQ9Y297 605 aa21■□□□□ 0.95
UBE2D3-216ENST00000503742 ATP1B2P14415 290 aaPredicted RBP20.99■□□□□ 0.95
UBE2D3-216ENST00000503742 ETV3P41162 512 aa20.99■□□□□ 0.95
UBE2D3-216ENST00000503742 ERVPABLB-1P60509 514 aa20.99■□□□□ 0.95
UBE2D3-216ENST00000503742 GRB7Q14451 532 aa20.99■□□□□ 0.95
UBE2D3-216ENST00000503742 AGKQ53H12 422 aa20.99■□□□□ 0.95
UBE2D3-216ENST00000503742 XKR7Q5GH72 579 aa20.99■□□□□ 0.95
UBE2D3-216ENST00000503742 PARS2Q7L3T8 475 aaKnown RBP20.99■□□□□ 0.95
UBE2D3-216ENST00000503742 GOLGA7Q7Z5G4 137 aa20.99■□□□□ 0.95
UBE2D3-216ENST00000503742 TRAM1L1Q8N609 369 aa20.99■□□□□ 0.95
UBE2D3-216ENST00000503742 OR52B6Q8NGF0 335 aa20.99■□□□□ 0.95
UBE2D3-216ENST00000503742 SUN2Q9UH99 717 aa20.99■□□□□ 0.95
UBE2D3-216ENST00000503742 SARDHQ9UL12 918 aa20.99■□□□□ 0.95
UBE2D3-216ENST00000503742 COL4A3Q01955 1670 aa20.99■□□□□ 0.95
UBE2D3-216ENST00000503742 KIAA1549LQ6ZVL6 1849 aa20.99■□□□□ 0.95
UBE2D3-216ENST00000503742 ENO3P13929 434 aaPredicted RBP20.99■□□□□ 0.95
UBE2D3-216ENST00000503742 LBPP18428 481 aa20.99■□□□□ 0.95
UBE2D3-216ENST00000503742 GPX3P22352 226 aa20.99■□□□□ 0.95
UBE2D3-216ENST00000503742 XPAP23025 273 aaPredicted RBP20.99■□□□□ 0.95
UBE2D3-216ENST00000503742 GCKP35557 465 aa20.99■□□□□ 0.95
UBE2D3-216ENST00000503742 GTF2H2Q13888 395 aa20.99■□□□□ 0.95
UBE2D3-216ENST00000503742 PDGFRLQ15198 375 aa20.99■□□□□ 0.95
UBE2D3-216ENST00000503742 GTF2H2CQ6P1K8 395 aa20.99■□□□□ 0.95
UBE2D3-216ENST00000503742 HPS6Q86YV9 775 aa20.99■□□□□ 0.95
UBE2D3-216ENST00000503742 NOL11Q9H8H0 719 aaKnown RBP20.99■□□□□ 0.95
UBE2D3-216ENST00000503742 CCDC167Q9P0B6 97 aa20.99■□□□□ 0.95
UBE2D3-216ENST00000503742 GIMAP2Q9UG22 337 aa20.99■□□□□ 0.95
UBE2D3-216ENST00000503742 POMPQ9Y244 141 aa20.99■□□□□ 0.95
UBE2D3-216ENST00000503742 RANBP2P49792 3224 aaKnown RBP20.99■□□□□ 0.95
UBE2D3-216ENST00000503742 TCF20Q9UGU0 1960 aaKnown RBP20.98■□□□□ 0.95
UBE2D3-216ENST00000503742 OR7A17O14581 309 aa20.98■□□□□ 0.95
UBE2D3-216ENST00000503742 GIPC1O14908 333 aa20.98■□□□□ 0.95
UBE2D3-216ENST00000503742 TBX10O75333 385 aa20.98■□□□□ 0.95
UBE2D3-216ENST00000503742 OR4F21O95013 312 aa20.98■□□□□ 0.95
UBE2D3-216ENST00000503742 GUCA1CO95843 209 aa20.98■□□□□ 0.95
UBE2D3-216ENST00000503742 VCLP18206 1134 aa20.98■□□□□ 0.95
UBE2D3-216ENST00000503742 STX5Q13190 355 aa20.98■□□□□ 0.95
UBE2D3-216ENST00000503742 EIF4HQ15056 248 aaKnown RBP20.98■□□□□ 0.95
UBE2D3-216ENST00000503742 HNRNPA1L2Q32P51 320 aaKnown RBP20.98■□□□□ 0.95
UBE2D3-216ENST00000503742 POM121L1PQ3SYA9 428 aa20.98■□□□□ 0.95
UBE2D3-216ENST00000503742 SULT1C3Q6IMI6 304 aa20.98■□□□□ 0.95
UBE2D3-216ENST00000503742 OGFOD2Q6N063 350 aa20.98■□□□□ 0.95
UBE2D3-216ENST00000503742 LETMD1Q6P1Q0 360 aa20.98■□□□□ 0.95
UBE2D3-216ENST00000503742 UBTD2Q8WUN7 234 aa20.98■□□□□ 0.95
UBE2D3-216ENST00000503742 RHBDF1Q96CC6 855 aa20.98■□□□□ 0.95
UBE2D3-216ENST00000503742 TUBGCP3Q96CW5 907 aa20.98■□□□□ 0.95
UBE2D3-216ENST00000503742 NPAS2Q99743 824 aa20.98■□□□□ 0.95
UBE2D3-216ENST00000503742 RIOK2Q9BVS4 552 aaKnown RBP20.98■□□□□ 0.95
UBE2D3-216ENST00000503742 APOL5Q9BWW9 433 aa20.98■□□□□ 0.95
UBE2D3-216ENST00000503742 SGTAO43765 313 aa20.97■□□□□ 0.95
UBE2D3-216ENST00000503742 PRNPP04156 253 aa20.97■□□□□ 0.95
UBE2D3-216ENST00000503742 SNRPB2P08579 225 aaKnown RBP20.97■□□□□ 0.95
UBE2D3-216ENST00000503742 ART3Q13508 389 aa20.97■□□□□ 0.95
UBE2D3-216ENST00000503742 C9orf64Q5T6V5 341 aa20.97■□□□□ 0.95
UBE2D3-216ENST00000503742 PPP2R2DQ66LE6 453 aa20.97■□□□□ 0.95
UBE2D3-216ENST00000503742 TANGO2Q6ICL3 276 aa20.97■□□□□ 0.95
UBE2D3-216ENST00000503742 METTL2BQ6P1Q9 378 aaKnown RBP20.97■□□□□ 0.95
UBE2D3-216ENST00000503742 LIPIQ6XZB0 460 aa20.97■□□□□ 0.95
UBE2D3-216ENST00000503742 FUNDC1Q8IVP5 155 aa20.97■□□□□ 0.95
UBE2D3-216ENST00000503742 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.97■□□□□ 0.95
UBE2D3-216ENST00000503742 EFCAB3Q8N7B9 438 aa20.97■□□□□ 0.95
UBE2D3-216ENST00000503742 DDHD1Q8NEL9 900 aa20.97■□□□□ 0.95
UBE2D3-216ENST00000503742 ST13P5Q8NFI4 369 aaPredicted RBP20.97■□□□□ 0.95
UBE2D3-216ENST00000503742 TMEM79Q9BSE2 394 aa20.97■□□□□ 0.95
UBE2D3-216ENST00000503742 ZSCAN5AQ9BUG6 496 aa20.97■□□□□ 0.95
UBE2D3-216ENST00000503742 WDR41Q9HAD4 459 aa20.97■□□□□ 0.95
UBE2D3-216ENST00000503742 THG1LQ9NWX6 298 aaKnown RBP20.97■□□□□ 0.95
UBE2D3-216ENST00000503742 C15orf41Q9Y2V0 281 aa20.97■□□□□ 0.95
UBE2D3-216ENST00000503742 FADS2P1A8MWK0 482 aa20.97■□□□□ 0.95
UBE2D3-216ENST00000503742 FBP2O00757 339 aa20.97■□□□□ 0.95
UBE2D3-216ENST00000503742 NUAK1O60285 661 aa20.97■□□□□ 0.95
UBE2D3-216ENST00000503742 CHEK2O96017 543 aa20.97■□□□□ 0.95
UBE2D3-216ENST00000503742 AKT1P31749 480 aa20.97■□□□□ 0.95
UBE2D3-216ENST00000503742 PTDSS1P48651 473 aaKnown RBP20.97■□□□□ 0.95
UBE2D3-216ENST00000503742 HSPA7P48741 367 aa20.97■□□□□ 0.95
UBE2D3-216ENST00000503742 STX1BP61266 288 aa20.97■□□□□ 0.95
UBE2D3-216ENST00000503742 IRX1P78414 480 aaPredicted RBP20.97■□□□□ 0.95
UBE2D3-216ENST00000503742 FNDC3BQ53EP0 1204 aaKnown RBP20.97■□□□□ 0.95
UBE2D3-216ENST00000503742 PIGGQ5H8A4 983 aa20.97■□□□□ 0.95
UBE2D3-216ENST00000503742 ERAP2Q6P179 960 aa20.97■□□□□ 0.95
UBE2D3-216ENST00000503742 PAOXQ6QHF9 649 aa20.97■□□□□ 0.95
UBE2D3-216ENST00000503742 BNC2Q6ZN30 1099 aaPredicted RBP20.97■□□□□ 0.95
UBE2D3-216ENST00000503742 DET1Q7L5Y6 550 aa20.97■□□□□ 0.95
UBE2D3-216ENST00000503742 TMIEQ8NEW7 156 aa20.97■□□□□ 0.95
UBE2D3-216ENST00000503742 OR9I1Q8NGQ6 314 aa20.97■□□□□ 0.95
UBE2D3-216ENST00000503742 DCUN1D1Q96GG9 259 aa20.97■□□□□ 0.95
UBE2D3-216ENST00000503742 CCT7Q99832 543 aa20.97■□□□□ 0.95
UBE2D3-216ENST00000503742 MRPL1Q9BYD6 325 aaKnown RBP20.97■□□□□ 0.95
UBE2D3-216ENST00000503742 IGFLR1Q9H665 355 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms