RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 TMEM74Q96NL1 305 aa17.86■□□□□ 0.45
PDLIM7-209ENST00000503346 FCRL3Q96P31 734 aaPredicted RBP17.86■□□□□ 0.45
PDLIM7-209ENST00000503346 TRIM56Q9BRZ2 755 aaKnown RBP17.86■□□□□ 0.45
PDLIM7-209ENST00000503346 COG4Q9H9E3 785 aa17.86■□□□□ 0.45
PDLIM7-209ENST00000503346 CDC23Q9UJX2 597 aa17.86■□□□□ 0.45
PDLIM7-209ENST00000503346 ATXN7L1Q9ULK2 861 aaPredicted RBP17.86■□□□□ 0.45
PDLIM7-209ENST00000503346 CEP295Q9C0D2 2601 aa17.85■□□□□ 0.45
PDLIM7-209ENST00000503346 ZCWPW2A0A1B0GU75 182 aa17.85■□□□□ 0.45
PDLIM7-209ENST00000503346 F8W8V4 182 aa17.85■□□□□ 0.45
PDLIM7-209ENST00000503346 TMX2-CTNND1H3BSU7 103 aa17.85■□□□□ 0.45
PDLIM7-209ENST00000503346 USP1O94782 785 aa17.85■□□□□ 0.45
PDLIM7-209ENST00000503346 FTH1P02794 183 aa17.85■□□□□ 0.45
PDLIM7-209ENST00000503346 CAPNS1P04632 268 aa17.85■□□□□ 0.45
PDLIM7-209ENST00000503346 OR56A5P0C7T3 313 aa17.85■□□□□ 0.45
PDLIM7-209ENST00000503346 CCKBRP32239 447 aa17.85■□□□□ 0.45
PDLIM7-209ENST00000503346 INHBCP55103 352 aa17.85■□□□□ 0.45
PDLIM7-209ENST00000503346 RP1P56715 2156 aa17.85■□□□□ 0.45
PDLIM7-209ENST00000503346 ZFP36L1Q07352 338 aaKnown RBP17.85■□□□□ 0.45
PDLIM7-209ENST00000503346 C2orf54Q08AI8 447 aa17.85■□□□□ 0.45
PDLIM7-209ENST00000503346 RPA4Q13156 261 aa17.85■□□□□ 0.45
PDLIM7-209ENST00000503346 RPE65Q16518 533 aa17.85■□□□□ 0.45
PDLIM7-209ENST00000503346 MAP9Q49MG5 647 aa17.85■□□□□ 0.45
PDLIM7-209ENST00000503346 DNAJC21Q5F1R6 531 aaKnown RBP17.85■□□□□ 0.45
PDLIM7-209ENST00000503346 MRNIPQ6NTE8 343 aa17.85■□□□□ 0.45
PDLIM7-209ENST00000503346 TMEM26Q6ZUK4 368 aa17.85■□□□□ 0.45
PDLIM7-209ENST00000503346 B3GNT8Q7Z7M8 397 aa17.85■□□□□ 0.45
PDLIM7-209ENST00000503346 LDB1Q86U70 411 aaPredicted RBP17.85■□□□□ 0.45
PDLIM7-209ENST00000503346 SLITRK4Q8IW52 837 aa17.85■□□□□ 0.45
PDLIM7-209ENST00000503346 LILRA3Q8N6C8 439 aaPredicted RBP17.85■□□□□ 0.45
PDLIM7-209ENST00000503346 GPR150Q8NGU9 434 aa17.85■□□□□ 0.45
PDLIM7-209ENST00000503346 ZNF669Q96BR6 464 aaPredicted RBP17.85■□□□□ 0.45
PDLIM7-209ENST00000503346 CXorf40BQ96DE9 158 aa17.85■□□□□ 0.45
PDLIM7-209ENST00000503346 NXPE2Q96DL1 559 aa17.85■□□□□ 0.45
PDLIM7-209ENST00000503346 SNF8Q96H20 258 aa17.85■□□□□ 0.45
PDLIM7-209ENST00000503346 CNTNAP3BQ96NU0 1288 aa17.85■□□□□ 0.45
PDLIM7-209ENST00000503346 CNTNAP3Q9BZ76 1288 aa17.85■□□□□ 0.45
PDLIM7-209ENST00000503346 WWP1Q9H0M0 922 aa17.85■□□□□ 0.45
PDLIM7-209ENST00000503346 EPB41L1Q9H4G0 881 aa17.85■□□□□ 0.45
PDLIM7-209ENST00000503346 SLC40A1Q9NP59 571 aa17.85■□□□□ 0.45
PDLIM7-209ENST00000503346 PSMD13Q9UNM6 376 aa17.85■□□□□ 0.45
PDLIM7-209ENST00000503346 RPS6KL1Q9Y6S9 549 aa17.85■□□□□ 0.45
PDLIM7-209ENST00000503346 COL27A1Q8IZC6 1860 aaPredicted RBP17.84■□□□□ 0.45
PDLIM7-209ENST00000503346 TMEM8BA6NDV4 472 aa17.84■□□□□ 0.45
PDLIM7-209ENST00000503346 EFCAB8A8MWE9 144 aa17.84■□□□□ 0.45
PDLIM7-209ENST00000503346 KIF2AO00139 706 aaPredicted RBP17.84■□□□□ 0.45
PDLIM7-209ENST00000503346 PRMT5O14744 637 aaPredicted RBP17.84■□□□□ 0.45
PDLIM7-209ENST00000503346 TP73O15350 636 aa17.84■□□□□ 0.45
PDLIM7-209ENST00000503346 PROS1P07225 676 aa17.84■□□□□ 0.45
PDLIM7-209ENST00000503346 SLC35G4P0C7Q5 338 aa17.84■□□□□ 0.45
PDLIM7-209ENST00000503346 MTHFD1P11586 935 aaKnown RBP17.84■□□□□ 0.45
PDLIM7-209ENST00000503346 CKAP4Q07065 602 aaKnown RBP17.84■□□□□ 0.45
PDLIM7-209ENST00000503346 DHX9Q08211 1270 aaKnown RBP17.84■□□□□ 0.45
PDLIM7-209ENST00000503346 TYSND1Q2T9J0 566 aa17.84■□□□□ 0.45
PDLIM7-209ENST00000503346 NKAIN2Q5VXU1 208 aa17.84■□□□□ 0.45
PDLIM7-209ENST00000503346 CAPRIN2Q6IMN6 1127 aaKnown RBP17.84■□□□□ 0.45
PDLIM7-209ENST00000503346 USP53Q70EK8 1073 aa17.84■□□□□ 0.45
PDLIM7-209ENST00000503346 TMPRSS9Q7Z410 1059 aa17.84■□□□□ 0.45
PDLIM7-209ENST00000503346 PIM3Q86V86 326 aa17.84■□□□□ 0.45
PDLIM7-209ENST00000503346 OR10G6Q8NH81 332 aa17.84■□□□□ 0.45
PDLIM7-209ENST00000503346 STAMBPL1Q96FJ0 436 aa17.84■□□□□ 0.45
PDLIM7-209ENST00000503346 ATXN7L3BQ96GX2 97 aa17.84■□□□□ 0.45
PDLIM7-209ENST00000503346 LIN37Q96GY3 246 aaPredicted RBP17.84■□□□□ 0.45
PDLIM7-209ENST00000503346 RMDN2Q96LZ7 410 aa17.84■□□□□ 0.45
PDLIM7-209ENST00000503346 INSM2Q96T92 566 aaPredicted RBP17.84■□□□□ 0.45
PDLIM7-209ENST00000503346 TCF12Q99081 682 aa17.84■□□□□ 0.45
PDLIM7-209ENST00000503346 DPYSL5Q9BPU6 564 aa17.84■□□□□ 0.45
PDLIM7-209ENST00000503346 NUDT22Q9BRQ3 303 aa17.84■□□□□ 0.45
PDLIM7-209ENST00000503346 TBC1D10AQ9BXI6 508 aa17.84■□□□□ 0.45
PDLIM7-209ENST00000503346 TRIM31Q9BZY9 425 aa17.84■□□□□ 0.45
PDLIM7-209ENST00000503346 P2RY12Q9H244 342 aa17.84■□□□□ 0.45
PDLIM7-209ENST00000503346 RDH14Q9HBH5 336 aa17.84■□□□□ 0.45
PDLIM7-209ENST00000503346 DKK4Q9UBT3 224 aa17.84■□□□□ 0.45
PDLIM7-209ENST00000503346 FAM8A1Q9UBU6 413 aa17.84■□□□□ 0.45
PDLIM7-209ENST00000503346 MAD1L1Q9Y6D9 718 aa17.84■□□□□ 0.45
PDLIM7-209ENST00000503346 PRAMEF33A0A0G2JMD5 474 aa17.83■□□□□ 0.44
PDLIM7-209ENST00000503346 GOLGA8KD6RF30 607 aa17.83■□□□□ 0.44
PDLIM7-209ENST00000503346 GOLGA8TH3BQL2 631 aa17.83■□□□□ 0.44
PDLIM7-209ENST00000503346 NDC80O14777 642 aa17.83■□□□□ 0.44
PDLIM7-209ENST00000503346 LIN7AO14910 233 aaPredicted RBP17.83■□□□□ 0.44
PDLIM7-209ENST00000503346 RAD51CO43502 376 aa17.83■□□□□ 0.44
PDLIM7-209ENST00000503346 DUX1O43812 170 aa17.83■□□□□ 0.44
PDLIM7-209ENST00000503346 NDUFS3O75489 264 aa17.83■□□□□ 0.44
PDLIM7-209ENST00000503346 URI1O94763 535 aaPredicted RBP17.83■□□□□ 0.44
PDLIM7-209ENST00000503346 POLBP06746 335 aa17.83■□□□□ 0.44
PDLIM7-209ENST00000503346 PGAM1P18669 254 aa17.83■□□□□ 0.44
PDLIM7-209ENST00000503346 OGNP20774 298 aaKnown RBP17.83■□□□□ 0.44
PDLIM7-209ENST00000503346 RPS3P23396 243 aaKnown RBP eCLIP17.83■□□□□ 0.44
PDLIM7-209ENST00000503346 CSF2RBP32927 897 aa17.83■□□□□ 0.44
PDLIM7-209ENST00000503346 ITGA8P53708 1063 aa17.83■□□□□ 0.44
PDLIM7-209ENST00000503346 CFHR1Q03591 330 aa17.83■□□□□ 0.44
PDLIM7-209ENST00000503346 WHAMMP3Q1A5X7 153 aa17.83■□□□□ 0.44
PDLIM7-209ENST00000503346 MSS51Q4VC12 460 aa17.83■□□□□ 0.44
PDLIM7-209ENST00000503346 RNF187Q5TA31 235 aaPredicted RBP17.83■□□□□ 0.44
PDLIM7-209ENST00000503346 NEPROQ6NW34 567 aa17.83■□□□□ 0.44
PDLIM7-209ENST00000503346 SDCCAG8Q86SQ7 713 aaPredicted RBP17.83■□□□□ 0.44
PDLIM7-209ENST00000503346 LRRC6Q86X45 466 aa17.83■□□□□ 0.44
PDLIM7-209ENST00000503346 KDF1Q8NAX2 398 aaPredicted RBP17.83■□□□□ 0.44
PDLIM7-209ENST00000503346 BBOF1Q8ND07 529 aa17.83■□□□□ 0.44
PDLIM7-209ENST00000503346 SPDYE1Q8NFV5 336 aaPredicted RBP17.83■□□□□ 0.44
PDLIM7-209ENST00000503346 AHCYL2Q96HN2 611 aaKnown RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms