RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 LRMPQ12912 555 aa5.63□□□□□ -1.51
NIPBL-203ENST00000503274 CDC16Q13042 620 aa5.63□□□□□ -1.51
NIPBL-203ENST00000503274 ITPK1Q13572 414 aa5.63□□□□□ -1.51
NIPBL-203ENST00000503274 SIM2Q14190 667 aaPredicted RBP5.63□□□□□ -1.51
NIPBL-203ENST00000503274 ZSCAN23Q3MJ62 389 aa5.63□□□□□ -1.51
NIPBL-203ENST00000503274 ZNF805Q5CZA5 627 aa5.63□□□□□ -1.51
NIPBL-203ENST00000503274 C18orf63Q68DL7 685 aa5.63□□□□□ -1.51
NIPBL-203ENST00000503274 TMEM154Q6P9G4 183 aa5.63□□□□□ -1.51
NIPBL-203ENST00000503274 SDCCAG8Q86SQ7 713 aaPredicted RBP5.63□□□□□ -1.51
NIPBL-203ENST00000503274 GPR180Q86V85 440 aa5.63□□□□□ -1.51
NIPBL-203ENST00000503274 HACE1Q8IYU2 909 aa5.63□□□□□ -1.51
NIPBL-203ENST00000503274 WDTC1Q8N5D0 677 aa5.63□□□□□ -1.51
NIPBL-203ENST00000503274 SPATA20Q8TB22 786 aa5.63□□□□□ -1.51
NIPBL-203ENST00000503274 SECTM1Q8WVN6 248 aa5.63□□□□□ -1.51
NIPBL-203ENST00000503274 PIGTQ969N2 578 aa5.63□□□□□ -1.51
NIPBL-203ENST00000503274 TTC14Q96N46 770 aa5.63□□□□□ -1.51
NIPBL-203ENST00000503274 PKP4Q99569 1192 aa5.63□□□□□ -1.51
NIPBL-203ENST00000503274 CHCHD6Q9BRQ6 235 aa5.63□□□□□ -1.51
NIPBL-203ENST00000503274 PIGMQ9H3S5 423 aa5.63□□□□□ -1.51
NIPBL-203ENST00000503274 LRRC4Q9HBW1 653 aa5.63□□□□□ -1.51
NIPBL-203ENST00000503274 MTMR10Q9NXD2 777 aa5.63□□□□□ -1.51
NIPBL-203ENST00000503274 STK39Q9UEW8 545 aa5.63□□□□□ -1.51
NIPBL-203ENST00000503274 FBXW11Q9UKB1 542 aa5.63□□□□□ -1.51
NIPBL-203ENST00000503274 POU2F3Q9UKI9 436 aa5.63□□□□□ -1.51
NIPBL-203ENST00000503274 PADI3Q9ULW8 664 aa5.63□□□□□ -1.51
NIPBL-203ENST00000503274 KLHL20Q9Y2M5 609 aa5.63□□□□□ -1.51
NIPBL-203ENST00000503274 LAS1LQ9Y4W2 734 aaKnown RBP5.63□□□□□ -1.51
NIPBL-203ENST00000503274 PCDHAC2Q9Y5I4 1007 aa5.63□□□□□ -1.51
NIPBL-203ENST00000503274 PTPRCP08575 1304 aa5.63□□□□□ -1.51
NIPBL-203ENST00000503274 KANSL1LA0AUZ9 987 aa5.62□□□□□ -1.51
NIPBL-203ENST00000503274 A8MZ25 164 aa5.62□□□□□ -1.51
NIPBL-203ENST00000503274 KCNN4O15554 427 aa5.62□□□□□ -1.51
NIPBL-203ENST00000503274 BUB3O43684 328 aa5.62□□□□□ -1.51
NIPBL-203ENST00000503274 PTP4A3O75365 173 aa5.62□□□□□ -1.51
NIPBL-203ENST00000503274 STARD3NLO95772 234 aa5.62□□□□□ -1.51
NIPBL-203ENST00000503274 HLA-DOBP13765 273 aa5.62□□□□□ -1.51
NIPBL-203ENST00000503274 MYOD1P15172 320 aa5.62□□□□□ -1.51
NIPBL-203ENST00000503274 UGT1A1P22309 533 aa5.62□□□□□ -1.51
NIPBL-203ENST00000503274 IL15P40933 162 aaPredicted RBP5.62□□□□□ -1.51
NIPBL-203ENST00000503274 ILF3Q12906 894 aaKnown RBP eCLIP5.62□□□□□ -1.51
NIPBL-203ENST00000503274 MYLK3Q32MK0 819 aa5.62□□□□□ -1.51
NIPBL-203ENST00000503274 ZNF672Q499Z4 452 aaPredicted RBP5.62□□□□□ -1.51
NIPBL-203ENST00000503274 JADE1Q6IE81 842 aa5.62□□□□□ -1.51
NIPBL-203ENST00000503274 KMT5CQ86Y97 462 aa5.62□□□□□ -1.51
NIPBL-203ENST00000503274 TICAM1Q8IUC6 712 aa5.62□□□□□ -1.51
NIPBL-203ENST00000503274 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.62□□□□□ -1.51
NIPBL-203ENST00000503274 RFLNBQ8N5W9 214 aa5.62□□□□□ -1.51
NIPBL-203ENST00000503274 ACVR1CQ8NER5 493 aa5.62□□□□□ -1.51
NIPBL-203ENST00000503274 OR1J2Q8NGS2 313 aa5.62□□□□□ -1.51
NIPBL-203ENST00000503274 OR8K5Q8NH50 307 aa5.62□□□□□ -1.51
NIPBL-203ENST00000503274 OR5R1Q8NH85 324 aa5.62□□□□□ -1.51
NIPBL-203ENST00000503274 THAP6Q8TBB0 222 aa5.62□□□□□ -1.51
NIPBL-203ENST00000503274 DNAAF4Q8WXU2 420 aa5.62□□□□□ -1.51
NIPBL-203ENST00000503274 EGLN2Q96KS0 407 aa5.62□□□□□ -1.51
NIPBL-203ENST00000503274 CFAP53Q96M91 514 aa5.62□□□□□ -1.51
NIPBL-203ENST00000503274 CSTL1Q9H114 145 aa5.62□□□□□ -1.51
NIPBL-203ENST00000503274 PLEKHA5Q9HAU0 1116 aa5.62□□□□□ -1.51
NIPBL-203ENST00000503274 NUDCQ9Y266 331 aa5.62□□□□□ -1.51
NIPBL-203ENST00000503274 SESN1Q9Y6P5 492 aa5.62□□□□□ -1.51
NIPBL-203ENST00000503274 KIF7Q2M1P5 1343 aa5.62□□□□□ -1.51
NIPBL-203ENST00000503274 KDRP35968 1356 aa5.62□□□□□ -1.51
NIPBL-203ENST00000503274 H3BQ06 376 aaPredicted RBP5.61□□□□□ -1.51
NIPBL-203ENST00000503274 LDB3O75112 727 aa5.61□□□□□ -1.51
NIPBL-203ENST00000503274 KRT36O76013 467 aa5.61□□□□□ -1.51
NIPBL-203ENST00000503274 HIST1H2ABP04908 130 aa5.61□□□□□ -1.51
NIPBL-203ENST00000503274 ICAM1P05362 532 aa5.61□□□□□ -1.51
NIPBL-203ENST00000503274 HMOX1P09601 288 aa5.61□□□□□ -1.51
NIPBL-203ENST00000503274 CDH1P12830 882 aa5.61□□□□□ -1.51
NIPBL-203ENST00000503274 ITGA2P17301 1181 aa5.61□□□□□ -1.51
NIPBL-203ENST00000503274 HIST1H2ADP20671 130 aa5.61□□□□□ -1.51
NIPBL-203ENST00000503274 TM4SF1P30408 202 aa5.61□□□□□ -1.51
NIPBL-203ENST00000503274 CRKLP46109 303 aaKnown RBP5.61□□□□□ -1.51
NIPBL-203ENST00000503274 FUT6P51993 359 aa5.61□□□□□ -1.51
NIPBL-203ENST00000503274 ZNF132P52740 706 aa5.61□□□□□ -1.51
NIPBL-203ENST00000503274 CLDN20P56880 219 aa5.61□□□□□ -1.51
NIPBL-203ENST00000503274 ACSM2AQ08AH3 577 aa5.61□□□□□ -1.51
NIPBL-203ENST00000503274 TEFQ10587 303 aa5.61□□□□□ -1.51
NIPBL-203ENST00000503274 TROAPQ12815 778 aa5.61□□□□□ -1.51
NIPBL-203ENST00000503274 PDE1CQ14123 709 aaPredicted RBP5.61□□□□□ -1.51
NIPBL-203ENST00000503274 SYT16Q17RD7 645 aa5.61□□□□□ -1.51
NIPBL-203ENST00000503274 ZNF718Q3SXZ3 478 aa5.61□□□□□ -1.51
NIPBL-203ENST00000503274 IRAK1BP1Q5VVH5 260 aa5.61□□□□□ -1.51
NIPBL-203ENST00000503274 ACSM2BQ68CK6 577 aa5.61□□□□□ -1.51
NIPBL-203ENST00000503274 PAPD4Q6PIY7 484 aaKnown RBP5.61□□□□□ -1.51
NIPBL-203ENST00000503274 UBR3Q6ZT12 1888 aa5.61□□□□□ -1.51
NIPBL-203ENST00000503274 SMIM5Q71RC9 77 aa5.61□□□□□ -1.51
NIPBL-203ENST00000503274 HIST3H2AQ7L7L0 130 aa5.61□□□□□ -1.51
NIPBL-203ENST00000503274 TSPAN33Q86UF1 283 aa5.61□□□□□ -1.51
NIPBL-203ENST00000503274 TTC5Q8N0Z6 440 aa5.61□□□□□ -1.51
NIPBL-203ENST00000503274 BBS10Q8TAM1 723 aa5.61□□□□□ -1.51
NIPBL-203ENST00000503274 HM13Q8TCT9 377 aa5.61□□□□□ -1.51
NIPBL-203ENST00000503274 ELMOD3Q96FG2 381 aa5.61□□□□□ -1.51
NIPBL-203ENST00000503274 TEX13AQ9BXU3 409 aaPredicted RBP5.61□□□□□ -1.51
NIPBL-203ENST00000503274 FTOQ9C0B1 505 aaKnown RBP eCLIP5.61□□□□□ -1.51
NIPBL-203ENST00000503274 UBA5Q9GZZ9 404 aa5.61□□□□□ -1.51
NIPBL-203ENST00000503274 KCNG2Q9UJ96 466 aa5.61□□□□□ -1.51
NIPBL-203ENST00000503274 TOGARAM1Q9Y4F4 1720 aa5.61□□□□□ -1.51
NIPBL-203ENST00000503274 KDM6AO15550 1401 aaPredicted RBP5.6□□□□□ -1.51
NIPBL-203ENST00000503274 NPC1L1Q9UHC9 1359 aa5.6□□□□□ -1.51
NIPBL-203ENST00000503274 A0A0G2JLW4 131 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms