RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 SMAD1Q15797 465 aaKnown RBP24.64■■□□□ 1.53
LSM6-202ENST00000502781 HP1BP3Q5SSJ5 553 aaPredicted RBP24.64■■□□□ 1.53
LSM6-202ENST00000502781 CHCHD2P9Q5T1J5 151 aaPredicted RBP24.64■■□□□ 1.53
LSM6-202ENST00000502781 RNF187Q5TA31 235 aaPredicted RBP24.64■■□□□ 1.53
LSM6-202ENST00000502781 LRRC6Q86X45 466 aa24.64■■□□□ 1.53
LSM6-202ENST00000502781 UNC5BQ8IZJ1 945 aa24.64■■□□□ 1.53
LSM6-202ENST00000502781 MAPK15Q8TD08 544 aa24.64■■□□□ 1.53
LSM6-202ENST00000502781 LPGAT1Q92604 370 aa24.64■■□□□ 1.53
LSM6-202ENST00000502781 CCDC74AQ96AQ1 378 aa24.64■■□□□ 1.53
LSM6-202ENST00000502781 SARS2Q9NP81 518 aaKnown RBP24.64■■□□□ 1.53
LSM6-202ENST00000502781 C20orf96Q9NUD7 363 aaPredicted RBP24.64■■□□□ 1.53
LSM6-202ENST00000502781 ZDHHC18Q9NUE0 388 aa24.64■■□□□ 1.53
LSM6-202ENST00000502781 LRIT1Q9P2V4 623 aa24.64■■□□□ 1.53
LSM6-202ENST00000502781 WASF3Q9UPY6 502 aa24.64■■□□□ 1.53
LSM6-202ENST00000502781 WDR37Q9Y2I8 494 aa24.64■■□□□ 1.53
LSM6-202ENST00000502781 PDZK1P1A8MUH7 402 aa24.63■■□□□ 1.53
LSM6-202ENST00000502781 PPM1DO15297 605 aa24.63■■□□□ 1.53
LSM6-202ENST00000502781 NDUFS3O75489 264 aa24.63■■□□□ 1.53
LSM6-202ENST00000502781 S1PR4O95977 384 aa24.63■■□□□ 1.53
LSM6-202ENST00000502781 XRCC1P18887 633 aaPredicted RBP24.63■■□□□ 1.53
LSM6-202ENST00000502781 THOC5Q13769 683 aaKnown RBP24.63■■□□□ 1.53
LSM6-202ENST00000502781 FRG1Q14331 258 aaKnown RBP24.63■■□□□ 1.53
LSM6-202ENST00000502781 ZNF470Q6ECI4 717 aa24.63■■□□□ 1.53
LSM6-202ENST00000502781 DHRS13Q6UX07 377 aa24.63■■□□□ 1.53
LSM6-202ENST00000502781 KCNMB4Q86W47 210 aa24.63■■□□□ 1.53
LSM6-202ENST00000502781 LILRA3Q8N6C8 439 aaPredicted RBP24.63■■□□□ 1.53
LSM6-202ENST00000502781 FBXO36Q8NEA4 188 aa24.63■■□□□ 1.53
LSM6-202ENST00000502781 CALML6Q8TD86 181 aa24.63■■□□□ 1.53
LSM6-202ENST00000502781 BIRC8Q96P09 236 aa24.63■■□□□ 1.53
LSM6-202ENST00000502781 FOXP3Q9BZS1 431 aa24.63■■□□□ 1.53
LSM6-202ENST00000502781 ACSL5Q9ULC5 683 aa24.63■■□□□ 1.53
LSM6-202ENST00000502781 PIKFYVEQ9Y2I7 2098 aa24.63■■□□□ 1.53
LSM6-202ENST00000502781 SPEGQ15772 3267 aa24.62■■□□□ 1.53
LSM6-202ENST00000502781 OPA1O60313 960 aa24.62■■□□□ 1.53
LSM6-202ENST00000502781 FTH1P02794 183 aa24.62■■□□□ 1.53
LSM6-202ENST00000502781 UBE2IP63279 158 aaKnown RBP24.62■■□□□ 1.53
LSM6-202ENST00000502781 CLCA4Q14CN2 919 aa24.62■■□□□ 1.53
LSM6-202ENST00000502781 CCDC157Q569K6 752 aa24.62■■□□□ 1.53
LSM6-202ENST00000502781 HSP90AA5PQ58FG0 334 aa24.62■■□□□ 1.53
LSM6-202ENST00000502781 ZBED8Q8IZ13 594 aa24.62■■□□□ 1.53
LSM6-202ENST00000502781 OTUD6BQ8N6M0 293 aa24.62■■□□□ 1.53
LSM6-202ENST00000502781 CERS2Q96G23 380 aa24.62■■□□□ 1.53
LSM6-202ENST00000502781 CCDC3Q9BQI4 270 aa24.62■■□□□ 1.53
LSM6-202ENST00000502781 FAM167BQ9BTA0 163 aa24.62■■□□□ 1.53
LSM6-202ENST00000502781 COG4Q9H9E3 785 aa24.62■■□□□ 1.53
LSM6-202ENST00000502781 EPB41L5Q9HCM4 733 aa24.62■■□□□ 1.53
LSM6-202ENST00000502781 INTS10Q9NVR2 710 aaKnown RBP24.62■■□□□ 1.53
LSM6-202ENST00000502781 ZNF624Q9P2J8 865 aaPredicted RBP24.62■■□□□ 1.53
LSM6-202ENST00000502781 TRBV23OR9-2A0A075B6M9 112 aa24.61■■□□□ 1.53
LSM6-202ENST00000502781 F8W8V4 182 aa24.61■■□□□ 1.53
LSM6-202ENST00000502781 PFDN6O15212 129 aa24.61■■□□□ 1.53
LSM6-202ENST00000502781 RPA4Q13156 261 aa24.61■■□□□ 1.53
LSM6-202ENST00000502781 SEPT7Q16181 437 aaKnown RBP24.61■■□□□ 1.53
LSM6-202ENST00000502781 SLC9B2Q86UD5 537 aa24.61■■□□□ 1.53
LSM6-202ENST00000502781 ANKMY2Q8IV38 441 aa24.61■■□□□ 1.53
LSM6-202ENST00000502781 DENND6AQ8IWF6 608 aa24.61■■□□□ 1.53
LSM6-202ENST00000502781 CNTN4Q8IWV2 1026 aa24.61■■□□□ 1.53
LSM6-202ENST00000502781 CFAP206Q8IYR0 622 aa24.61■■□□□ 1.53
LSM6-202ENST00000502781 AVL9Q8NBF6 648 aa24.61■■□□□ 1.53
LSM6-202ENST00000502781 CFAP36Q96G28 342 aa24.61■■□□□ 1.53
LSM6-202ENST00000502781 FAM129AQ9BZQ8 928 aa24.61■■□□□ 1.53
LSM6-202ENST00000502781 FAM114A2Q9NRY5 505 aa24.61■■□□□ 1.53
LSM6-202ENST00000502781 CPNE7Q9UBL6 633 aa24.61■■□□□ 1.53
LSM6-202ENST00000502781 VPS9D1Q9Y2B5 631 aa24.61■■□□□ 1.53
LSM6-202ENST00000502781 KNTC1P50748 2209 aa24.6■■□□□ 1.53
LSM6-202ENST00000502781 SLC19A1P41440 591 aa24.6■■□□□ 1.53
LSM6-202ENST00000502781 SLC1A2P43004 574 aa24.6■■□□□ 1.53
LSM6-202ENST00000502781 GPR3P46089 330 aa24.6■■□□□ 1.53
LSM6-202ENST00000502781 INSM1Q01101 510 aaPredicted RBP24.6■■□□□ 1.53
LSM6-202ENST00000502781 HHEXQ03014 270 aa24.6■■□□□ 1.53
LSM6-202ENST00000502781 CTBP1Q13363 440 aa24.6■■□□□ 1.53
LSM6-202ENST00000502781 ZNF789Q5FWF6 425 aa24.6■■□□□ 1.53
LSM6-202ENST00000502781 CTSL3PQ5NE16 218 aa24.6■■□□□ 1.53
LSM6-202ENST00000502781 CAPRIN2Q6IMN6 1127 aaKnown RBP24.6■■□□□ 1.53
LSM6-202ENST00000502781 CHCHD4Q8N4Q1 142 aa24.6■■□□□ 1.53
LSM6-202ENST00000502781 LKAAEAR1Q8TD35 194 aa24.6■■□□□ 1.53
LSM6-202ENST00000502781 OR52A5Q9H2C5 316 aa24.6■■□□□ 1.53
LSM6-202ENST00000502781 SAYSD1Q9NPB0 183 aa24.6■■□□□ 1.53
LSM6-202ENST00000502781 FBXO5Q9UKT4 447 aa24.6■■□□□ 1.53
LSM6-202ENST00000502781 PCDHB1Q9Y5F3 818 aa24.6■■□□□ 1.53
LSM6-202ENST00000502781 OR52A4PA6NMU1 304 aa24.59■■□□□ 1.53
LSM6-202ENST00000502781 NTN3O00634 580 aaPredicted RBP24.59■■□□□ 1.53
LSM6-202ENST00000502781 LIN7AO14910 233 aaPredicted RBP24.59■■□□□ 1.53
LSM6-202ENST00000502781 ESR1P03372 595 aa24.59■■□□□ 1.53
LSM6-202ENST00000502781 ERVK-10P10266 1014 aa24.59■■□□□ 1.53
LSM6-202ENST00000502781 HALP42357 657 aa24.59■■□□□ 1.53
LSM6-202ENST00000502781 TRMT10BQ6PF06 316 aaKnown RBP24.59■■□□□ 1.53
LSM6-202ENST00000502781 SPRED1Q7Z699 444 aa24.59■■□□□ 1.53
LSM6-202ENST00000502781 C2CD4AQ8NCU7 369 aaPredicted RBP24.59■■□□□ 1.53
LSM6-202ENST00000502781 LRRN4CLQ8ND94 238 aa24.59■■□□□ 1.53
LSM6-202ENST00000502781 POT1Q9NUX5 634 aa24.59■■□□□ 1.53
LSM6-202ENST00000502781 MOCS1Q9NZB8 636 aa24.59■■□□□ 1.53
LSM6-202ENST00000502781 FAM8A1Q9UBU6 413 aa24.59■■□□□ 1.53
LSM6-202ENST00000502781 GNPTGQ9UJJ9 305 aa24.59■■□□□ 1.53
LSM6-202ENST00000502781 PSMD13Q9UNM6 376 aa24.59■■□□□ 1.53
LSM6-202ENST00000502781 A0A1W2PQM1 296 aa24.58■■□□□ 1.53
LSM6-202ENST00000502781 UBA6A0AVT1 1052 aaPredicted RBP24.58■■□□□ 1.53
LSM6-202ENST00000502781 MED19A0JLT2 244 aaPredicted RBP24.58■■□□□ 1.53
LSM6-202ENST00000502781 SLC5A10A0PJK1 596 aa24.58■■□□□ 1.53
LSM6-202ENST00000502781 RHPN2P1A8MT19 583 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms