RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 SPPL2BQ8TCT7 592 aa17.02■□□□□ 0.31
HMGXB3-201ENST00000502717 CGREF1Q99674 301 aa17.02■□□□□ 0.31
HMGXB3-201ENST00000502717 ITPAQ9BY32 194 aa17.02■□□□□ 0.31
HMGXB3-201ENST00000502717 FZD8Q9H461 694 aa17.02■□□□□ 0.31
HMGXB3-201ENST00000502717 TOR3AQ9H497 397 aa17.02■□□□□ 0.31
HMGXB3-201ENST00000502717 RBM47A0AV96 593 aaKnown RBP17.01■□□□□ 0.31
HMGXB3-201ENST00000502717 GABRDO14764 452 aa17.01■□□□□ 0.31
HMGXB3-201ENST00000502717 RPL3P39023 403 aaKnown RBP17.01■□□□□ 0.31
HMGXB3-201ENST00000502717 MBTD1Q05BQ5 628 aa17.01■□□□□ 0.31
HMGXB3-201ENST00000502717 MAP2K5Q13163 448 aa17.01■□□□□ 0.31
HMGXB3-201ENST00000502717 C15orf39Q6ZRI6 1047 aa17.01■□□□□ 0.31
HMGXB3-201ENST00000502717 CLHC1Q8NHS4 586 aa17.01■□□□□ 0.31
HMGXB3-201ENST00000502717 NTAN1Q96AB6 310 aa17.01■□□□□ 0.31
HMGXB3-201ENST00000502717 TINF2Q9BSI4 451 aa17.01■□□□□ 0.31
HMGXB3-201ENST00000502717 IPPKQ9H8X2 491 aa17.01■□□□□ 0.31
HMGXB3-201ENST00000502717 ALS2Q96Q42 1657 aa17.01■□□□□ 0.31
HMGXB3-201ENST00000502717 ADAMDEC1O15204 470 aa17.01■□□□□ 0.31
HMGXB3-201ENST00000502717 NPPAP01160 153 aa17.01■□□□□ 0.31
HMGXB3-201ENST00000502717 PGRP06401 933 aa17.01■□□□□ 0.31
HMGXB3-201ENST00000502717 MBL2P11226 248 aaPredicted RBP17.01■□□□□ 0.31
HMGXB3-201ENST00000502717 PSEN2P49810 448 aa17.01■□□□□ 0.31
HMGXB3-201ENST00000502717 TRIM40Q6P9F5 258 aa17.01■□□□□ 0.31
HMGXB3-201ENST00000502717 KRT74Q7RTS7 529 aa17.01■□□□□ 0.31
HMGXB3-201ENST00000502717 ERVK-11Q9UQG0 969 aa17.01■□□□□ 0.31
HMGXB3-201ENST00000502717 AURKAO14965 403 aa17.01■□□□□ 0.31
HMGXB3-201ENST00000502717 SNAP29O95721 258 aa17.01■□□□□ 0.31
HMGXB3-201ENST00000502717 MC4RP32245 332 aa17.01■□□□□ 0.31
HMGXB3-201ENST00000502717 FEN1P39748 380 aaKnown RBP17.01■□□□□ 0.31
HMGXB3-201ENST00000502717 SYT16Q17RD7 645 aa17.01■□□□□ 0.31
HMGXB3-201ENST00000502717 FAM92BQ6ZTR7 304 aa17.01■□□□□ 0.31
HMGXB3-201ENST00000502717 CSGALNACT1Q8TDX6 532 aa17.01■□□□□ 0.31
HMGXB3-201ENST00000502717 KBTBD7Q8WVZ9 684 aa17.01■□□□□ 0.31
HMGXB3-201ENST00000502717 EFHD2Q96C19 240 aaPredicted RBP17.01■□□□□ 0.31
HMGXB3-201ENST00000502717 C1GALT1C1Q96EU7 318 aa17.01■□□□□ 0.31
HMGXB3-201ENST00000502717 GPR20Q99678 358 aa17.01■□□□□ 0.31
HMGXB3-201ENST00000502717 MMP27Q9H306 513 aa17.01■□□□□ 0.31
HMGXB3-201ENST00000502717 IRGMA1A4Y4 181 aa17.01■□□□□ 0.31
HMGXB3-201ENST00000502717 CCRL2O00421 344 aa17.01■□□□□ 0.31
HMGXB3-201ENST00000502717 GABBR2O75899 941 aa17.01■□□□□ 0.31
HMGXB3-201ENST00000502717 SLC6A2P23975 617 aa17.01■□□□□ 0.31
HMGXB3-201ENST00000502717 HOXD12P35452 270 aa17.01■□□□□ 0.31
HMGXB3-201ENST00000502717 NOVP48745 357 aa17.01■□□□□ 0.31
HMGXB3-201ENST00000502717 C11orf96Q7Z7L8 435 aa17.01■□□□□ 0.31
HMGXB3-201ENST00000502717 TMEM159Q96B96 161 aa17.01■□□□□ 0.31
HMGXB3-201ENST00000502717 DEFB118Q96PH6 123 aa17.01■□□□□ 0.31
HMGXB3-201ENST00000502717 GAD1Q99259 594 aa17.01■□□□□ 0.31
HMGXB3-201ENST00000502717 KCNS3Q9BQ31 491 aa17.01■□□□□ 0.31
HMGXB3-201ENST00000502717 SLC22A4Q9H015 551 aa17.01■□□□□ 0.31
HMGXB3-201ENST00000502717 ANKRD33BA6NCL7 494 aa17■□□□□ 0.31
HMGXB3-201ENST00000502717 CASKO14936 926 aa17■□□□□ 0.31
HMGXB3-201ENST00000502717 POMCP01189 267 aa17■□□□□ 0.31
HMGXB3-201ENST00000502717 CES1P23141 567 aa17■□□□□ 0.31
HMGXB3-201ENST00000502717 CCR10P46092 362 aa17■□□□□ 0.31
HMGXB3-201ENST00000502717 ZNF280AP59817 542 aaPredicted RBP17■□□□□ 0.31
HMGXB3-201ENST00000502717 SOWAHAQ2M3V2 549 aa17■□□□□ 0.31
HMGXB3-201ENST00000502717 SLC10A6Q3KNW5 377 aa17■□□□□ 0.31
HMGXB3-201ENST00000502717 FBXO43Q4G163 708 aa17■□□□□ 0.31
HMGXB3-201ENST00000502717 CLEC4CQ8WTT0 213 aa17■□□□□ 0.31
HMGXB3-201ENST00000502717 TEFMQ96QE5 360 aaKnown RBP17■□□□□ 0.31
HMGXB3-201ENST00000502717 CCDC177Q9NQR7 707 aaPredicted RBP17■□□□□ 0.31
HMGXB3-201ENST00000502717 SORBS2O94875 1100 aaKnown RBP17■□□□□ 0.31
HMGXB3-201ENST00000502717 AP2A2O94973 939 aa17■□□□□ 0.31
HMGXB3-201ENST00000502717 PTX3P26022 381 aaPredicted RBP17■□□□□ 0.31
HMGXB3-201ENST00000502717 ELK4P28324 431 aa17■□□□□ 0.31
HMGXB3-201ENST00000502717 ANKRD13BQ86YJ7 626 aa17■□□□□ 0.31
HMGXB3-201ENST00000502717 SLC15A4Q8N697 577 aa17■□□□□ 0.31
HMGXB3-201ENST00000502717 NACC2Q96BF6 587 aa17■□□□□ 0.31
HMGXB3-201ENST00000502717 SLC38A2Q96QD8 506 aa17■□□□□ 0.31
HMGXB3-201ENST00000502717 PTGFRNQ9P2B2 879 aa17■□□□□ 0.31
HMGXB3-201ENST00000502717 TRIM64CA6NLI5 447 aa17■□□□□ 0.31
HMGXB3-201ENST00000502717 SOCS2O14508 198 aa17■□□□□ 0.31
HMGXB3-201ENST00000502717 OR10H3O60404 316 aa17■□□□□ 0.31
HMGXB3-201ENST00000502717 INMTO95050 263 aa17■□□□□ 0.31
HMGXB3-201ENST00000502717 OGNP20774 298 aaKnown RBP17■□□□□ 0.31
HMGXB3-201ENST00000502717 HCAR3P49019 387 aa17■□□□□ 0.31
HMGXB3-201ENST00000502717 MS4A2Q01362 244 aa17■□□□□ 0.31
HMGXB3-201ENST00000502717 LYPLAL1Q5VWZ2 237 aa17■□□□□ 0.31
HMGXB3-201ENST00000502717 CHST15Q7LFX5 561 aaPredicted RBP17■□□□□ 0.31
HMGXB3-201ENST00000502717 C9orf43Q8TAL5 461 aaPredicted RBP17■□□□□ 0.31
HMGXB3-201ENST00000502717 OSBPL10Q9BXB5 764 aa17■□□□□ 0.31
HMGXB3-201ENST00000502717 MBD2Q9UBB5 411 aa17■□□□□ 0.31
HMGXB3-201ENST00000502717 NRCAMQ92823 1304 aa17■□□□□ 0.31
HMGXB3-201ENST00000502717 ACADMP11310 421 aa17■□□□□ 0.31
HMGXB3-201ENST00000502717 PRKAR2AP13861 404 aaKnown RBP17■□□□□ 0.31
HMGXB3-201ENST00000502717 SLC5A2P31639 672 aa17■□□□□ 0.31
HMGXB3-201ENST00000502717 FBXW4P57775 412 aa17■□□□□ 0.31
HMGXB3-201ENST00000502717 PMS2P3Q13401 168 aa17■□□□□ 0.31
HMGXB3-201ENST00000502717 PAFAH1B3Q15102 231 aaKnown RBP17■□□□□ 0.31
HMGXB3-201ENST00000502717 FAM174BQ3ZCQ3 159 aa17■□□□□ 0.31
HMGXB3-201ENST00000502717 PEX5LQ8IYB4 626 aa17■□□□□ 0.31
HMGXB3-201ENST00000502717 DCBLD1Q8N8Z6 715 aa17■□□□□ 0.31
HMGXB3-201ENST00000502717 NLNQ9BYT8 704 aa17■□□□□ 0.31
HMGXB3-201ENST00000502717 IRF2BPLQ9H1B7 796 aa17■□□□□ 0.31
HMGXB3-201ENST00000502717 DPEP3Q9H4B8 488 aa17■□□□□ 0.31
HMGXB3-201ENST00000502717 IGFLR1Q9H665 355 aa17■□□□□ 0.31
HMGXB3-201ENST00000502717 BPIFA1Q9NP55 256 aa17■□□□□ 0.31
HMGXB3-201ENST00000502717 F7P08709 466 aaPredicted RBP16.99■□□□□ 0.31
HMGXB3-201ENST00000502717 ALDH9A1P49189 494 aa16.99■□□□□ 0.31
HMGXB3-201ENST00000502717 NIPAL4Q0D2K0 466 aa16.99■□□□□ 0.31
HMGXB3-201ENST00000502717 C6orf141Q5SZD1 244 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms