RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 SGF29Q96ES7 293 aa10.53□□□□□ -0.72
UBE2D3-212ENST00000502563 PANX3Q96QZ0 392 aa10.53□□□□□ -0.72
UBE2D3-212ENST00000502563 CCDC3Q9BQI4 270 aa10.53□□□□□ -0.72
UBE2D3-212ENST00000502563 TRIM51Q9BSJ1 452 aa10.53□□□□□ -0.72
UBE2D3-212ENST00000502563 FAM167BQ9BTA0 163 aa10.53□□□□□ -0.72
UBE2D3-212ENST00000502563 TSPYL1Q9H0U9 437 aa10.53□□□□□ -0.72
UBE2D3-212ENST00000502563 P2RY12Q9H244 342 aa10.53□□□□□ -0.72
UBE2D3-212ENST00000502563 CAAP1Q9H8G2 361 aa10.53□□□□□ -0.72
UBE2D3-212ENST00000502563 ARFGAP3Q9NP61 516 aa10.53□□□□□ -0.72
UBE2D3-212ENST00000502563 LATS2Q9NRM7 1088 aa10.53□□□□□ -0.72
UBE2D3-212ENST00000502563 LRIT1Q9P2V4 623 aa10.53□□□□□ -0.72
UBE2D3-212ENST00000502563 KCNK6Q9Y257 313 aa10.53□□□□□ -0.72
UBE2D3-212ENST00000502563 MSRB2Q9Y3D2 182 aa10.53□□□□□ -0.72
UBE2D3-212ENST00000502563 COMMD10Q9Y6G5 202 aa10.53□□□□□ -0.72
UBE2D3-212ENST00000502563 ASXL3Q9C0F0 2248 aa10.53□□□□□ -0.72
UBE2D3-212ENST00000502563 COL27A1Q8IZC6 1860 aaPredicted RBP10.53□□□□□ -0.72
UBE2D3-212ENST00000502563 SPTBN2O15020 2390 aa10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 CTAGE15A4D2H0 777 aa10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 OR51F1A6NGY5 319 aa10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 B4DGG1 531 aa10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 CCL22O00626 93 aa10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 ZNF500O60304 480 aaPredicted RBP10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 GSTA2P09210 222 aa10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 CTAGE8P0CG41 777 aa10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 BRAFP15056 766 aa10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 CCKBRP32239 447 aa10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 MLLT3P42568 568 aaPredicted RBP10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 CDKN1CP49918 316 aaPredicted RBP10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 HHEXQ03014 270 aa10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 DHX9Q08211 1270 aaKnown RBP10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 C2orf54Q08AI8 447 aa10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 EIF3IQ13347 325 aaKnown RBP10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 CRYMQ14894 314 aa10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 CAPRIN2Q6IMN6 1127 aaKnown RBP10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 NEPROQ6NW34 567 aa10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 C8orf74Q6P047 294 aa10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 CASC4Q6P4E1 433 aa10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 CCNI2Q6ZMN8 369 aaPredicted RBP10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 CEP128Q6ZU80 1094 aa10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 CTAGE6Q86UF2 777 aa10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 RELL1Q8IUW5 271 aa10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 CTAGE4Q8IX94 777 aa10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 LPGAT1Q92604 370 aa10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 TMEM159Q96B96 161 aa10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 FCRL3Q96P31 734 aaPredicted RBP10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 DEPDC7Q96QD5 511 aa10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 RAB33BQ9H082 229 aa10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 OR52A5Q9H2C5 316 aa10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 L2HGDHQ9H9P8 463 aa10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 EPB41L5Q9HCM4 733 aa10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 SLC40A1Q9NP59 571 aa10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 GRHL1Q9NZI5 618 aa10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 PDP2Q9P2J9 529 aa10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 CPNE7Q9UBL6 633 aa10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 DKK4Q9UBT3 224 aa10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 GNPTGQ9UJJ9 305 aa10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 ANGPTL2Q9UKU9 493 aa10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 CORO1CQ9ULV4 474 aaPredicted RBP10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 PRKAB1Q9Y478 270 aa10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 PLEKHM1Q9Y4G2 1056 aa10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 HEBP2Q9Y5Z4 205 aa10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 RNF215Q9Y6U7 377 aa10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 PIKFYVEQ9Y2I7 2098 aa10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 PTPRBP23467 1997 aa10.52□□□□□ -0.73
UBE2D3-212ENST00000502563 NCOR2Q9Y618 2525 aa10.51□□□□□ -0.73
UBE2D3-212ENST00000502563 RP1P56715 2156 aa10.51□□□□□ -0.73
UBE2D3-212ENST00000502563 MED19A0JLT2 244 aaPredicted RBP10.51□□□□□ -0.73
UBE2D3-212ENST00000502563 SLC5A10A0PJK1 596 aa10.51□□□□□ -0.73
UBE2D3-212ENST00000502563 RHPN2P1A8MT19 583 aa10.51□□□□□ -0.73
UBE2D3-212ENST00000502563 D6RAR5 112 aa10.51□□□□□ -0.73
UBE2D3-212ENST00000502563 GOLGA8MH3BSY2 632 aa10.51□□□□□ -0.73
UBE2D3-212ENST00000502563 PPM1DO15297 605 aa10.51□□□□□ -0.73
UBE2D3-212ENST00000502563 GPC4O75487 556 aa10.51□□□□□ -0.73
UBE2D3-212ENST00000502563 CPNE6O95741 557 aa10.51□□□□□ -0.73
UBE2D3-212ENST00000502563 EML2O95834 649 aa10.51□□□□□ -0.73
UBE2D3-212ENST00000502563 ATP5DP30049 168 aa10.51□□□□□ -0.73
UBE2D3-212ENST00000502563 TRA2AQ13595 282 aaKnown RBP eCLIP10.51□□□□□ -0.73
UBE2D3-212ENST00000502563 NFE2L1Q14494 772 aa10.51□□□□□ -0.73
UBE2D3-212ENST00000502563 SEMA3AQ14563 771 aa10.51□□□□□ -0.73
UBE2D3-212ENST00000502563 MSS51Q4VC12 460 aa10.51□□□□□ -0.73
UBE2D3-212ENST00000502563 PERM1Q5SV97 790 aa10.51□□□□□ -0.73
UBE2D3-212ENST00000502563 WDR74Q6RFH5 385 aaPredicted RBP10.51□□□□□ -0.73
UBE2D3-212ENST00000502563 DHRS13Q6UX07 377 aa10.51□□□□□ -0.73
UBE2D3-212ENST00000502563 RBM44Q6ZP01 1051 aaKnown RBP10.51□□□□□ -0.73
UBE2D3-212ENST00000502563 CENPUQ71F23 418 aa10.51□□□□□ -0.73
UBE2D3-212ENST00000502563 CLDN19Q8N6F1 224 aa10.51□□□□□ -0.73
UBE2D3-212ENST00000502563 ASZ1Q8WWH4 475 aa10.51□□□□□ -0.73
UBE2D3-212ENST00000502563 KCNJ9Q92806 393 aa10.51□□□□□ -0.73
UBE2D3-212ENST00000502563 RNF166Q96A37 237 aaPredicted RBP10.51□□□□□ -0.73
UBE2D3-212ENST00000502563 CCDC74AQ96AQ1 378 aa10.51□□□□□ -0.73
UBE2D3-212ENST00000502563 ZNF669Q96BR6 464 aaPredicted RBP10.51□□□□□ -0.73
UBE2D3-212ENST00000502563 LIN37Q96GY3 246 aaPredicted RBP10.51□□□□□ -0.73
UBE2D3-212ENST00000502563 BIRC8Q96P09 236 aa10.51□□□□□ -0.73
UBE2D3-212ENST00000502563 B3GNT4Q9C0J1 378 aa10.51□□□□□ -0.73
UBE2D3-212ENST00000502563 NRSN2Q9GZP1 204 aa10.51□□□□□ -0.73
UBE2D3-212ENST00000502563 ABCG4Q9H172 646 aa10.51□□□□□ -0.73
UBE2D3-212ENST00000502563 LRRN3Q9H3W5 708 aa10.51□□□□□ -0.73
UBE2D3-212ENST00000502563 COG4Q9H9E3 785 aa10.51□□□□□ -0.73
UBE2D3-212ENST00000502563 PRDM8Q9NQV8 689 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms