RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 TEKQ02763 1124 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 GRIK2Q13002 908 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 ZBTB17Q13105 803 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 LPIN1Q14693 890 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 MBTPS1Q14703 1052 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 DLG2Q15700 870 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 NKPD1Q17RQ9 610 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 LRRC36Q1X8D7 754 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 TECRLQ5HYJ1 363 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 REP15Q6BDI9 236 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 TAPT1Q6NXT6 567 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 LINC00299Q6ZSB3 139 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 KIAA0408Q6ZU52 694 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 PDZD4Q76G19 769 aaPredicted RBP3.9□□□□□ -1.79
CLTC-209ENST00000498711 PIWIL4Q7Z3Z4 852 aaKnown RBP3.9□□□□□ -1.79
CLTC-209ENST00000498711 AMIGO2Q86SJ2 522 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 LINC00523Q86TU6 105 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 ACOT1Q86TX2 421 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 ZNF354CQ86Y25 554 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 SPACA3Q8IXA5 215 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 FSTL5Q8N475 847 aaPredicted RBP3.9□□□□□ -1.79
CLTC-209ENST00000498711 RNF169Q8NCN4 708 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 LPGAT1Q92604 370 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 TMIGD2Q96BF3 282 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 CXCL16Q9H2A7 254 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 CLK4Q9HAZ1 481 aaKnown RBP3.9□□□□□ -1.79
CLTC-209ENST00000498711 CYP4F11Q9HBI6 524 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 CD320Q9NPF0 282 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 PAK6Q9NQU5 681 aaPredicted RBP3.9□□□□□ -1.79
CLTC-209ENST00000498711 TLR9Q9NR96 1032 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 AGPAT4Q9NRZ5 378 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 TRMT13Q9NUP7 481 aaKnown RBP3.9□□□□□ -1.79
CLTC-209ENST00000498711 TMEM9Q9P0T7 183 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 CNOT6Q9ULM6 557 aaKnown RBP3.9□□□□□ -1.79
CLTC-209ENST00000498711 RUVBL2Q9Y230 463 aaKnown RBP3.9□□□□□ -1.79
CLTC-209ENST00000498711 MYRFQ9Y2G1 1151 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 VWA7Q9Y334 891 aa3.9□□□□□ -1.79
CLTC-209ENST00000498711 ALPK3Q96L96 1907 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 MKI67P46013 3256 aaKnown RBP3.89□□□□□ -1.79
CLTC-209ENST00000498711 A0A087WXM4 84 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 A0A087WZ62 844 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 PRORSD1PA6NEY8 169 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 ASB14A6NK59 587 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 INO80B-WBP1J3KQ70 363 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 MAFKO60675 156 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 GPR32O75388 356 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 PAPSS2O95340 614 aaPredicted RBP3.89□□□□□ -1.79
CLTC-209ENST00000498711 AMHP03971 560 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 FUCA1P04066 466 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 PRR35P0CG20 571 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 INSRRP14616 1297 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 PTPN1P18031 435 aaKnown RBP3.89□□□□□ -1.79
CLTC-209ENST00000498711 CCNCP24863 283 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 TKTP29401 623 aaKnown RBP3.89□□□□□ -1.79
CLTC-209ENST00000498711 AXLP30530 894 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 CCR10P46092 362 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 ZFP36L2P47974 494 aaKnown RBP3.89□□□□□ -1.79
CLTC-209ENST00000498711 CXCR3P49682 368 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 SUOXP51687 545 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 CLCN3P51790 818 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 OXCT1P55809 520 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 RAB10P61026 200 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 ATP6V0D1P61421 351 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 CDC42EP1Q00587 391 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 CDH17Q12864 832 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 PITRM1Q5JRX3 1037 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 CATSPEREQ5SY80 951 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 MANEALQ5VSG8 457 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 ITPRIPL1Q6GPH6 555 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 KIAA0930Q6ICG6 404 aaPredicted RBP3.89□□□□□ -1.79
CLTC-209ENST00000498711 PRMT9Q6P2P2 845 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 FUNDC1Q8IVP5 155 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 HERC6Q8IVU3 1022 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 SMYD1Q8NB12 490 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 TXNDC5Q8NBS9 432 aaKnown RBP3.89□□□□□ -1.79
CLTC-209ENST00000498711 PDPRQ8NCN5 879 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 LRTOMTQ8WZ04 291 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 TANKQ92844 425 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 ATP6V1E2Q96A05 226 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 C18orf25Q96B23 403 aaPredicted RBP3.89□□□□□ -1.79
CLTC-209ENST00000498711 CCDC126Q96EE4 140 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 CNBD2Q96M20 576 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 ZNF512Q96ME7 567 aaPredicted RBP3.89□□□□□ -1.79
CLTC-209ENST00000498711 PPP1R2P1Q96PQ5 205 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 PRPF18Q99633 342 aaKnown RBP3.89□□□□□ -1.79
CLTC-209ENST00000498711 HOPXQ9BPY8 73 aaPredicted RBP3.89□□□□□ -1.79
CLTC-209ENST00000498711 FDXACB1Q9BRP7 624 aaPredicted RBP3.89□□□□□ -1.79
CLTC-209ENST00000498711 C16orf70Q9BSU1 422 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 TRMOQ9BU70 441 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 DPEP3Q9H4B8 488 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 GSTO2Q9H4Y5 243 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 CAB39LQ9H9S4 337 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 RC3H2Q9HBD1 1191 aaKnown RBP3.89□□□□□ -1.79
CLTC-209ENST00000498711 IRAK4Q9NWZ3 460 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 ERAP1Q9NZ08 941 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 ZNF69Q9UC07 566 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 POLHQ9Y253 713 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 TMEM265A0A087WTH1 108 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 HEATR9A2RTY3 570 aa3.89□□□□□ -1.79
CLTC-209ENST00000498711 FAM72CH0Y354 149 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms