RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 CXCR5P32302 372 aa18.02■□□□□ 0.48
HOXD11-202ENST00000498438 GRIA1P42261 906 aa18.02■□□□□ 0.48
HOXD11-202ENST00000498438 CAPZBP47756 277 aa18.02■□□□□ 0.48
HOXD11-202ENST00000498438 PRLHRP49683 370 aa18.02■□□□□ 0.48
HOXD11-202ENST00000498438 TGIF1Q15583 401 aa18.02■□□□□ 0.48
HOXD11-202ENST00000498438 ARHGAP40Q5TG30 622 aa18.02■□□□□ 0.48
HOXD11-202ENST00000498438 METRNLQ641Q3 311 aa18.02■□□□□ 0.48
HOXD11-202ENST00000498438 DRICH1Q6PGQ1 229 aaPredicted RBP18.02■□□□□ 0.48
HOXD11-202ENST00000498438 XKR5Q6UX68 686 aa18.02■□□□□ 0.48
HOXD11-202ENST00000498438 TAS2R42Q7RTR8 314 aa18.02■□□□□ 0.48
HOXD11-202ENST00000498438 GPR155Q7Z3F1 870 aa18.02■□□□□ 0.48
HOXD11-202ENST00000498438 SERPINA9Q86WD7 417 aa18.02■□□□□ 0.48
HOXD11-202ENST00000498438 PLXDC1Q8IUK5 500 aa18.02■□□□□ 0.48
HOXD11-202ENST00000498438 MAIP1Q8WWC4 291 aa18.02■□□□□ 0.48
HOXD11-202ENST00000498438 RSC1A1Q92681 617 aa18.02■□□□□ 0.48
HOXD11-202ENST00000498438 CDKN2AIPNLQ96HQ2 116 aa18.02■□□□□ 0.48
HOXD11-202ENST00000498438 LINC00615Q96LM1 132 aaPredicted RBP18.02■□□□□ 0.48
HOXD11-202ENST00000498438 ZDHHC3Q9NYG2 299 aa18.02■□□□□ 0.48
HOXD11-202ENST00000498438 ZKSCAN5Q9Y2L8 839 aa18.02■□□□□ 0.48
HOXD11-202ENST00000498438 IGLV3-16A0A075B6K0 115 aa18.01■□□□□ 0.47
HOXD11-202ENST00000498438 KLHL33A6NCF5 533 aa18.01■□□□□ 0.47
HOXD11-202ENST00000498438 B4E171 279 aa18.01■□□□□ 0.47
HOXD11-202ENST00000498438 GAS8O95995 478 aa18.01■□□□□ 0.47
HOXD11-202ENST00000498438 C9P02748 559 aa18.01■□□□□ 0.47
HOXD11-202ENST00000498438 CD82P27701 267 aa18.01■□□□□ 0.47
HOXD11-202ENST00000498438 RPL22P35268 128 aaKnown RBP18.01■□□□□ 0.47
HOXD11-202ENST00000498438 TSPAN7P41732 249 aa18.01■□□□□ 0.47
HOXD11-202ENST00000498438 ARSDP51689 593 aa18.01■□□□□ 0.47
HOXD11-202ENST00000498438 CACNG1Q06432 222 aa18.01■□□□□ 0.47
HOXD11-202ENST00000498438 SOWAHCQ53LP3 525 aaPredicted RBP18.01■□□□□ 0.47
HOXD11-202ENST00000498438 PIANPQ8IYJ0 282 aa18.01■□□□□ 0.47
HOXD11-202ENST00000498438 LILRA3Q8N6C8 439 aaPredicted RBP18.01■□□□□ 0.47
HOXD11-202ENST00000498438 BMPERQ8N8U9 685 aa18.01■□□□□ 0.47
HOXD11-202ENST00000498438 HEXDCQ8WVB3 486 aa18.01■□□□□ 0.47
HOXD11-202ENST00000498438 TGM7Q96PF1 710 aa18.01■□□□□ 0.47
HOXD11-202ENST00000498438 WWP1Q9H0M0 922 aa18.01■□□□□ 0.47
HOXD11-202ENST00000498438 IMP3Q9NV31 184 aaKnown RBP18.01■□□□□ 0.47
HOXD11-202ENST00000498438 SLC39A1Q9NY26 324 aa18.01■□□□□ 0.47
HOXD11-202ENST00000498438 ACSL5Q9ULC5 683 aa18.01■□□□□ 0.47
HOXD11-202ENST00000498438 PCDHGA3Q9Y5H0 932 aa18.01■□□□□ 0.47
HOXD11-202ENST00000498438 B3GALT1Q9Y5Z6 326 aa18.01■□□□□ 0.47
HOXD11-202ENST00000498438 CFAP20Q9Y6A4 193 aaKnown RBP18.01■□□□□ 0.47
HOXD11-202ENST00000498438 TEX51A0A1B0GUA7 166 aa18■□□□□ 0.47
HOXD11-202ENST00000498438 HEATR9A2RTY3 570 aa18■□□□□ 0.47
HOXD11-202ENST00000498438 GOLGA6L3A6NEY3 463 aa18■□□□□ 0.47
HOXD11-202ENST00000498438 OR51F1A6NGY5 319 aa18■□□□□ 0.47
HOXD11-202ENST00000498438 APRTP07741 180 aa18■□□□□ 0.47
HOXD11-202ENST00000498438 ANKRD34CP0C6C1 535 aa18■□□□□ 0.47
HOXD11-202ENST00000498438 MTHFD1P11586 935 aaKnown RBP18■□□□□ 0.47
HOXD11-202ENST00000498438 PSMA3P25788 255 aa18■□□□□ 0.47
HOXD11-202ENST00000498438 MSNP26038 577 aaKnown RBP18■□□□□ 0.47
HOXD11-202ENST00000498438 VAC14Q08AM6 782 aa18■□□□□ 0.47
HOXD11-202ENST00000498438 DBN1Q16643 649 aa18■□□□□ 0.47
HOXD11-202ENST00000498438 SKIDA1Q1XH10 827 aa18■□□□□ 0.47
HOXD11-202ENST00000498438 DUS1LQ6P1R4 473 aaKnown RBP18■□□□□ 0.47
HOXD11-202ENST00000498438 HM13Q8TCT9 377 aa18■□□□□ 0.47
HOXD11-202ENST00000498438 JPH3Q8WXH2 748 aaPredicted RBP18■□□□□ 0.47
HOXD11-202ENST00000498438 C9orf72Q96LT7 481 aa18■□□□□ 0.47
HOXD11-202ENST00000498438 RMDN2Q96LZ7 410 aa18■□□□□ 0.47
HOXD11-202ENST00000498438 C12orf66Q96MD2 445 aa18■□□□□ 0.47
HOXD11-202ENST00000498438 BBC3Q96PG8 261 aaPredicted RBP18■□□□□ 0.47
HOXD11-202ENST00000498438 UBL7Q96S82 380 aaPredicted RBP18■□□□□ 0.47
HOXD11-202ENST00000498438 CCNL2Q96S94 520 aaPredicted RBP18■□□□□ 0.47
HOXD11-202ENST00000498438 INSM2Q96T92 566 aaPredicted RBP18■□□□□ 0.47
HOXD11-202ENST00000498438 DDA1Q9BW61 102 aa18■□□□□ 0.47
HOXD11-202ENST00000498438 CASS4Q9NQ75 786 aa18■□□□□ 0.47
HOXD11-202ENST00000498438 DRG1Q9Y295 367 aaKnown RBP18■□□□□ 0.47
HOXD11-202ENST00000498438 CAPN5O15484 640 aaPredicted RBP17.99■□□□□ 0.47
HOXD11-202ENST00000498438 POLBP06746 335 aa17.99■□□□□ 0.47
HOXD11-202ENST00000498438 SLC35G4P0C7Q5 338 aa17.99■□□□□ 0.47
HOXD11-202ENST00000498438 KCNJ1P48048 391 aa17.99■□□□□ 0.47
HOXD11-202ENST00000498438 LEPRP48357 1165 aaKnown RBP17.99■□□□□ 0.47
HOXD11-202ENST00000498438 RAB15P59190 212 aa17.99■□□□□ 0.47
HOXD11-202ENST00000498438 SRSF6Q13247 344 aaKnown RBP17.99■□□□□ 0.47
HOXD11-202ENST00000498438 ANKS6Q68DC2 871 aa17.99■□□□□ 0.47
HOXD11-202ENST00000498438 CCDC81Q6ZN84 652 aa17.99■□□□□ 0.47
HOXD11-202ENST00000498438 GSTA5Q7RTV2 222 aa17.99■□□□□ 0.47
HOXD11-202ENST00000498438 DTX1Q86Y01 620 aa17.99■□□□□ 0.47
HOXD11-202ENST00000498438 SPDYE1Q8NFV5 336 aaPredicted RBP17.99■□□□□ 0.47
HOXD11-202ENST00000498438 OR13J1Q8NGT2 312 aa17.99■□□□□ 0.47
HOXD11-202ENST00000498438 RANBP9Q96S59 729 aa17.99■□□□□ 0.47
HOXD11-202ENST00000498438 SLC2A6Q9UGQ3 507 aa17.99■□□□□ 0.47
HOXD11-202ENST00000498438 CCDC162PA2VCL2 907 aa17.98■□□□□ 0.47
HOXD11-202ENST00000498438 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.98■□□□□ 0.47
HOXD11-202ENST00000498438 STMND1H3BQB6 276 aa17.98■□□□□ 0.47
HOXD11-202ENST00000498438 K7ENP7 123 aa17.98■□□□□ 0.47
HOXD11-202ENST00000498438 FOXN2P32314 431 aa17.98■□□□□ 0.47
HOXD11-202ENST00000498438 BASP1P80723 227 aaKnown RBP17.98■□□□□ 0.47
HOXD11-202ENST00000498438 MC2RQ01718 297 aa17.98■□□□□ 0.47
HOXD11-202ENST00000498438 PLCL1Q15111 1095 aa17.98■□□□□ 0.47
HOXD11-202ENST00000498438 DCAF12Q5T6F0 453 aa17.98■□□□□ 0.47
HOXD11-202ENST00000498438 TSTD2Q5T7W7 516 aa17.98■□□□□ 0.47
HOXD11-202ENST00000498438 IRGCQ6NXR0 463 aa17.98■□□□□ 0.47
HOXD11-202ENST00000498438 INO80CQ6PI98 192 aaPredicted RBP17.98■□□□□ 0.47
HOXD11-202ENST00000498438 VASH2Q86V25 355 aa17.98■□□□□ 0.47
HOXD11-202ENST00000498438 CFAP206Q8IYR0 622 aa17.98■□□□□ 0.47
HOXD11-202ENST00000498438 CLDN19Q8N6F1 224 aa17.98■□□□□ 0.47
HOXD11-202ENST00000498438 PRELID2Q8N945 189 aa17.98■□□□□ 0.47
HOXD11-202ENST00000498438 SNRNP27Q8WVK2 155 aaKnown RBP17.98■□□□□ 0.47
HOXD11-202ENST00000498438 CTRCQ99895 268 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms