RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 DCP1BQ8IZD4 617 aaKnown RBP4.8□□□□□ -1.64
SSR3-209ENST00000498205 NEXN-AS1Q8NBZ9 246 aa4.8□□□□□ -1.64
SSR3-209ENST00000498205 CTCFLQ8NI51 663 aaPredicted RBP4.8□□□□□ -1.64
SSR3-209ENST00000498205 NEK9Q8TD19 979 aa4.8□□□□□ -1.64
SSR3-209ENST00000498205 CCDC12Q8WUD4 166 aaPredicted RBP4.8□□□□□ -1.64
SSR3-209ENST00000498205 PAGE5Q96GU1 130 aa4.8□□□□□ -1.64
SSR3-209ENST00000498205 DHTKD1Q96HY7 919 aaPredicted RBP4.8□□□□□ -1.64
SSR3-209ENST00000498205 IGSF21Q96ID5 467 aa4.8□□□□□ -1.64
SSR3-209ENST00000498205 METTL2AQ96IZ6 378 aaKnown RBP4.8□□□□□ -1.64
SSR3-209ENST00000498205 ADGRG7Q96K78 797 aa4.8□□□□□ -1.64
SSR3-209ENST00000498205 NYXQ9GZU5 481 aa4.8□□□□□ -1.64
SSR3-209ENST00000498205 PAIP1Q9H074 479 aaKnown RBP4.8□□□□□ -1.64
SSR3-209ENST00000498205 TTYH1Q9H313 450 aaPredicted RBP4.8□□□□□ -1.64
SSR3-209ENST00000498205 THAP9Q9H5L6 903 aa4.8□□□□□ -1.64
SSR3-209ENST00000498205 HAUS4Q9H6D7 363 aa4.8□□□□□ -1.64
SSR3-209ENST00000498205 C17orf75Q9HAS0 396 aa4.8□□□□□ -1.64
SSR3-209ENST00000498205 PREBQ9HCU5 417 aa4.8□□□□□ -1.64
SSR3-209ENST00000498205 OCIAD1Q9NX40 245 aa4.8□□□□□ -1.64
SSR3-209ENST00000498205 TRMT1Q9NXH9 659 aaKnown RBP4.8□□□□□ -1.64
SSR3-209ENST00000498205 TAS2R10Q9NYW0 307 aa4.8□□□□□ -1.64
SSR3-209ENST00000498205 SMARCAL1Q9NZC9 954 aa4.8□□□□□ -1.64
SSR3-209ENST00000498205 MYH13Q9UKX3 1938 aa4.8□□□□□ -1.64
SSR3-209ENST00000498205 PLIN4Q96Q06 1357 aa4.79□□□□□ -1.64
SSR3-209ENST00000498205 MYO3BQ8WXR4 1341 aa4.79□□□□□ -1.64
SSR3-209ENST00000498205 SCN5AQ14524 2016 aa4.79□□□□□ -1.64
SSR3-209ENST00000498205 LOC102724159A0A0B4J2E5 919 aa4.79□□□□□ -1.64
SSR3-209ENST00000498205 A0A1W2PQM1 296 aa4.79□□□□□ -1.64
SSR3-209ENST00000498205 BICDL2A1A5D9 508 aa4.79□□□□□ -1.64
SSR3-209ENST00000498205 CTAGE9A4FU28 777 aa4.79□□□□□ -1.64
SSR3-209ENST00000498205 MAGEA13PA6NCF6 341 aa4.79□□□□□ -1.64
SSR3-209ENST00000498205 NPIPB11E5RHQ5 1161 aa4.79□□□□□ -1.64
SSR3-209ENST00000498205 J3KR12 359 aa4.79□□□□□ -1.64
SSR3-209ENST00000498205 BCAT2O15382 392 aaPredicted RBP4.79□□□□□ -1.64
SSR3-209ENST00000498205 SEC14L5O43304 696 aa4.79□□□□□ -1.64
SSR3-209ENST00000498205 ZBTB11O95625 1053 aaPredicted RBP4.79□□□□□ -1.64
SSR3-209ENST00000498205 ABCD3P28288 659 aa4.79□□□□□ -1.64
SSR3-209ENST00000498205 GNG11P61952 73 aa4.79□□□□□ -1.64
SSR3-209ENST00000498205 KRT83P78385 493 aa4.79□□□□□ -1.64
SSR3-209ENST00000498205 RPL36AP83881 106 aaKnown RBP4.79□□□□□ -1.64
SSR3-209ENST00000498205 MYBPHQ13203 477 aa4.79□□□□□ -1.64
SSR3-209ENST00000498205 SNTA1Q13424 505 aa4.79□□□□□ -1.64
SSR3-209ENST00000498205 PWP2Q15269 919 aaKnown RBP4.79□□□□□ -1.64
SSR3-209ENST00000498205 AMZ1Q400G9 498 aa4.79□□□□□ -1.64
SSR3-209ENST00000498205 ATP13A5Q4VNC0 1218 aa4.79□□□□□ -1.64
SSR3-209ENST00000498205 SLC9B1Q4ZJI4 515 aa4.79□□□□□ -1.64
SSR3-209ENST00000498205 C6orf141Q5SZD1 244 aa4.79□□□□□ -1.64
SSR3-209ENST00000498205 SUSD4Q5VX71 490 aa4.79□□□□□ -1.64
SSR3-209ENST00000498205 ACAD10Q6JQN1 1059 aa4.79□□□□□ -1.64
SSR3-209ENST00000498205 FAM114A1Q8IWE2 563 aa4.79□□□□□ -1.64
SSR3-209ENST00000498205 ADSSL1Q8N142 457 aa4.79□□□□□ -1.64
SSR3-209ENST00000498205 C4orf32Q8N8J7 132 aa4.79□□□□□ -1.64
SSR3-209ENST00000498205 EIF1ADQ8N9N8 165 aaKnown RBP4.79□□□□□ -1.64
SSR3-209ENST00000498205 SMRP1Q8NCR6 262 aa4.79□□□□□ -1.64
SSR3-209ENST00000498205 C1orf131Q8NDD1 294 aaKnown RBP4.79□□□□□ -1.64
SSR3-209ENST00000498205 OR8K1Q8NGG5 319 aa4.79□□□□□ -1.64
SSR3-209ENST00000498205 WFIKKN2Q8TEU8 576 aa4.79□□□□□ -1.64
SSR3-209ENST00000498205 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.79□□□□□ -1.64
SSR3-209ENST00000498205 NSUN4Q96CB9 384 aaKnown RBP4.79□□□□□ -1.64
SSR3-209ENST00000498205 BICD1Q96G01 975 aa4.79□□□□□ -1.64
SSR3-209ENST00000498205 NR1H4Q96RI1 486 aaPredicted RBP4.79□□□□□ -1.64
SSR3-209ENST00000498205 ERGIC2Q96RQ1 377 aa4.79□□□□□ -1.64
SSR3-209ENST00000498205 KXD1Q9BQD3 176 aa4.79□□□□□ -1.64
SSR3-209ENST00000498205 SPZ1Q9BXG8 430 aa4.79□□□□□ -1.64
SSR3-209ENST00000498205 C1QTNF4Q9BXJ3 329 aa4.79□□□□□ -1.64
SSR3-209ENST00000498205 FUT8Q9BYC5 575 aa4.79□□□□□ -1.64
SSR3-209ENST00000498205 CRNKL1Q9BZJ0 848 aaKnown RBP4.79□□□□□ -1.64
SSR3-209ENST00000498205 TSGA10Q9BZW7 698 aa4.79□□□□□ -1.64
SSR3-209ENST00000498205 DDX31Q9H8H2 851 aaKnown RBP4.79□□□□□ -1.64
SSR3-209ENST00000498205 RNF14Q9UBS8 474 aa4.79□□□□□ -1.64
SSR3-209ENST00000498205 CDC14AQ9UNH5 594 aa4.79□□□□□ -1.64
SSR3-209ENST00000498205 ERVK-11Q9UQG0 969 aa4.79□□□□□ -1.64
SSR3-209ENST00000498205 STON1Q9Y6Q2 735 aa4.79□□□□□ -1.64
SSR3-209ENST00000498205 PVALEFA0A1B0GWK0 134 aa4.78□□□□□ -1.64
SSR3-209ENST00000498205 hDV102S1A0JD36 115 aa4.78□□□□□ -1.64
SSR3-209ENST00000498205 PLSCR5A0PG75 271 aa4.78□□□□□ -1.64
SSR3-209ENST00000498205 TMEM202A6NGA9 273 aa4.78□□□□□ -1.64
SSR3-209ENST00000498205 A6NLC8 198 aa4.78□□□□□ -1.64
SSR3-209ENST00000498205 SRRM3A6NNA2 597 aaPredicted RBP4.78□□□□□ -1.64
SSR3-209ENST00000498205 TULP2O00295 520 aa4.78□□□□□ -1.64
SSR3-209ENST00000498205 PSMA7O14818 248 aa4.78□□□□□ -1.64
SSR3-209ENST00000498205 TNFSF14O43557 240 aa4.78□□□□□ -1.64
SSR3-209ENST00000498205 ZIC3O60481 467 aa4.78□□□□□ -1.64
SSR3-209ENST00000498205 LCA5LO95447 670 aa4.78□□□□□ -1.64
SSR3-209ENST00000498205 FGFR1OPO95684 399 aaKnown RBP4.78□□□□□ -1.64
SSR3-209ENST00000498205 PPP1R3DO95685 299 aa4.78□□□□□ -1.64
SSR3-209ENST00000498205 GYPCP04921 128 aa4.78□□□□□ -1.64
SSR3-209ENST00000498205 IVLP07476 585 aa4.78□□□□□ -1.64
SSR3-209ENST00000498205 ITGB8P26012 769 aa4.78□□□□□ -1.64
SSR3-209ENST00000498205 ANXA13P27216 316 aa4.78□□□□□ -1.64
SSR3-209ENST00000498205 CDAP32320 146 aa4.78□□□□□ -1.64
SSR3-209ENST00000498205 CRKLP46109 303 aaKnown RBP4.78□□□□□ -1.64
SSR3-209ENST00000498205 CTCFP49711 727 aaPredicted RBP4.78□□□□□ -1.64
SSR3-209ENST00000498205 GSTO1P78417 241 aa4.78□□□□□ -1.64
SSR3-209ENST00000498205 CKAP4Q07065 602 aaKnown RBP4.78□□□□□ -1.64
SSR3-209ENST00000498205 GRIK3Q13003 919 aa4.78□□□□□ -1.64
SSR3-209ENST00000498205 KRT31Q15323 416 aa4.78□□□□□ -1.64
SSR3-209ENST00000498205 TCP11X2Q5H9J9 407 aa4.78□□□□□ -1.64
SSR3-209ENST00000498205 BEND6Q5SZJ8 279 aaPredicted RBP4.78□□□□□ -1.64
SSR3-209ENST00000498205 EXOC3L1Q86VI1 746 aa4.78□□□□□ -1.64
SSR3-209ENST00000498205 DSELQ8IZU8 1212 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms