RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 CCM2Q9BSQ5 444 aa13.34□□□□□ -0.27
CPNE1-227ENST00000498056 GSDMCQ9BYG8 508 aa13.34□□□□□ -0.27
CPNE1-227ENST00000498056 ZDHHC5Q9C0B5 715 aa13.34□□□□□ -0.27
CPNE1-227ENST00000498056 ERVMER34-1Q9H9K5 563 aa13.34□□□□□ -0.27
CPNE1-227ENST00000498056 CAB39LQ9H9S4 337 aa13.34□□□□□ -0.27
CPNE1-227ENST00000498056 IL21RQ9HBE5 538 aa13.34□□□□□ -0.27
CPNE1-227ENST00000498056 SPASTQ9UBP0 616 aa13.34□□□□□ -0.27
CPNE1-227ENST00000498056 TBK1Q9UHD2 729 aa13.34□□□□□ -0.27
CPNE1-227ENST00000498056 SLC24A2Q9UI40 661 aa13.34□□□□□ -0.27
CPNE1-227ENST00000498056 TRMT6Q9UJA5 497 aaKnown RBP13.34□□□□□ -0.27
CPNE1-227ENST00000498056 SLC39A10Q9ULF5 831 aa13.34□□□□□ -0.27
CPNE1-227ENST00000498056 GPR34Q9UPC5 381 aa13.34□□□□□ -0.27
CPNE1-227ENST00000498056 DOLKQ9UPQ8 538 aa13.34□□□□□ -0.27
CPNE1-227ENST00000498056 MTO1Q9Y2Z2 717 aaKnown RBP13.34□□□□□ -0.27
CPNE1-227ENST00000498056 GOLGA4Q13439 2230 aaKnown RBP13.33□□□□□ -0.27
CPNE1-227ENST00000498056 TLDC2A0PJX2 215 aa13.33□□□□□ -0.28
CPNE1-227ENST00000498056 FFAR2O15552 330 aa13.33□□□□□ -0.28
CPNE1-227ENST00000498056 AQP9O43315 295 aa13.33□□□□□ -0.28
CPNE1-227ENST00000498056 POP7O75817 140 aaKnown RBP13.33□□□□□ -0.28
CPNE1-227ENST00000498056 PIAS2O75928 621 aa13.33□□□□□ -0.28
CPNE1-227ENST00000498056 KRT38O76015 456 aa13.33□□□□□ -0.28
CPNE1-227ENST00000498056 APOA4P06727 396 aa13.33□□□□□ -0.28
CPNE1-227ENST00000498056 FDXRP22570 491 aa13.33□□□□□ -0.28
CPNE1-227ENST00000498056 AK4P27144 223 aaPredicted RBP13.33□□□□□ -0.28
CPNE1-227ENST00000498056 PREPP48147 710 aa13.33□□□□□ -0.28
CPNE1-227ENST00000498056 SERPINB8P50452 374 aa13.33□□□□□ -0.28
CPNE1-227ENST00000498056 PGGT1BP53609 377 aa13.33□□□□□ -0.28
CPNE1-227ENST00000498056 CTBSQ01459 385 aa13.33□□□□□ -0.28
CPNE1-227ENST00000498056 NHLH1Q02575 133 aa13.33□□□□□ -0.28
CPNE1-227ENST00000498056 LRP8Q14114 963 aa13.33□□□□□ -0.28
CPNE1-227ENST00000498056 ZNF460Q14592 562 aa13.33□□□□□ -0.28
CPNE1-227ENST00000498056 USP10Q14694 798 aaKnown RBP13.33□□□□□ -0.28
CPNE1-227ENST00000498056 CASP8Q14790 479 aa13.33□□□□□ -0.28
CPNE1-227ENST00000498056 ELOCQ15369 112 aa13.33□□□□□ -0.28
CPNE1-227ENST00000498056 ZNF423Q2M1K9 1284 aa13.33□□□□□ -0.28
CPNE1-227ENST00000498056 KRT71Q3SY84 523 aa13.33□□□□□ -0.28
CPNE1-227ENST00000498056 C11orf96Q7Z7L8 435 aa13.33□□□□□ -0.28
CPNE1-227ENST00000498056 DCLK2Q8N568 766 aa13.33□□□□□ -0.28
CPNE1-227ENST00000498056 ZBTB2Q8N680 514 aa13.33□□□□□ -0.28
CPNE1-227ENST00000498056 LILRA3Q8N6C8 439 aaPredicted RBP13.33□□□□□ -0.28
CPNE1-227ENST00000498056 ACVR1CQ8NER5 493 aa13.33□□□□□ -0.28
CPNE1-227ENST00000498056 OR2L2Q8NH16 312 aa13.33□□□□□ -0.28
CPNE1-227ENST00000498056 GIMAP7Q8NHV1 300 aa13.33□□□□□ -0.28
CPNE1-227ENST00000498056 ZIM3Q96PE6 472 aa13.33□□□□□ -0.28
CPNE1-227ENST00000498056 OLFM1Q99784 485 aa13.33□□□□□ -0.28
CPNE1-227ENST00000498056 MCMBPQ9BTE3 642 aa13.33□□□□□ -0.28
CPNE1-227ENST00000498056 DHRS4Q9BTZ2 278 aa13.33□□□□□ -0.28
CPNE1-227ENST00000498056 EDEM2Q9BV94 578 aa13.33□□□□□ -0.28
CPNE1-227ENST00000498056 COG4Q9H9E3 785 aa13.33□□□□□ -0.28
CPNE1-227ENST00000498056 PPCSQ9HAB8 311 aa13.33□□□□□ -0.28
CPNE1-227ENST00000498056 SEMA4GQ9NTN9 838 aa13.33□□□□□ -0.28
CPNE1-227ENST00000498056 TRNAU1APQ9NX07 287 aaKnown RBP13.33□□□□□ -0.28
CPNE1-227ENST00000498056 TAS2R13Q9NYV9 303 aa13.33□□□□□ -0.28
CPNE1-227ENST00000498056 SLC23A2Q9UGH3 650 aa13.33□□□□□ -0.28
CPNE1-227ENST00000498056 FETUBQ9UGM5 382 aa13.33□□□□□ -0.28
CPNE1-227ENST00000498056 ZNF180Q9UJW8 692 aa13.33□□□□□ -0.28
CPNE1-227ENST00000498056 ASCC3Q8N3C0 2202 aaKnown RBP13.32□□□□□ -0.28
CPNE1-227ENST00000498056 ARID1BQ8NFD5 2236 aaPredicted RBP13.32□□□□□ -0.28
CPNE1-227ENST00000498056 A0A1B0GTQ1 180 aa13.32□□□□□ -0.28
CPNE1-227ENST00000498056 MGAT4DA6NG13 374 aa13.32□□□□□ -0.28
CPNE1-227ENST00000498056 B4DGG1 531 aa13.32□□□□□ -0.28
CPNE1-227ENST00000498056 TRIM49D1C9J1S8 452 aa13.32□□□□□ -0.28
CPNE1-227ENST00000498056 RASGRF2O14827 1237 aa13.32□□□□□ -0.28
CPNE1-227ENST00000498056 YKT6O15498 198 aa13.32□□□□□ -0.28
CPNE1-227ENST00000498056 PHGDHO43175 533 aaKnown RBP13.32□□□□□ -0.28
CPNE1-227ENST00000498056 SNX2O60749 519 aa13.32□□□□□ -0.28
CPNE1-227ENST00000498056 CDH16O75309 829 aa13.32□□□□□ -0.28
CPNE1-227ENST00000498056 KRT37O76014 449 aa13.32□□□□□ -0.28
CPNE1-227ENST00000498056 GSTM1P09488 218 aa13.32□□□□□ -0.28
CPNE1-227ENST00000498056 SLC35G4P0C7Q5 338 aa13.32□□□□□ -0.28
CPNE1-227ENST00000498056 STMN1P16949 149 aa13.32□□□□□ -0.28
CPNE1-227ENST00000498056 CNTFP26441 200 aa13.32□□□□□ -0.28
CPNE1-227ENST00000498056 CCR7P32248 378 aa13.32□□□□□ -0.28
CPNE1-227ENST00000498056 ARHGAP8P85298 464 aa13.32□□□□□ -0.28
CPNE1-227ENST00000498056 GSTM4Q03013 218 aa13.32□□□□□ -0.28
CPNE1-227ENST00000498056 ZNF844Q08AG5 666 aa13.32□□□□□ -0.28
CPNE1-227ENST00000498056 HSPA14Q0VDF9 509 aa13.32□□□□□ -0.28
CPNE1-227ENST00000498056 ILF2Q12905 390 aaKnown RBP13.32□□□□□ -0.28
CPNE1-227ENST00000498056 TTLL9Q3SXZ7 439 aa13.32□□□□□ -0.28
CPNE1-227ENST00000498056 AASDHQ4L235 1098 aaPredicted RBP13.32□□□□□ -0.28
CPNE1-227ENST00000498056 UGT3A1Q6NUS8 523 aa13.32□□□□□ -0.28
CPNE1-227ENST00000498056 FAM83HQ6ZRV2 1179 aaPredicted RBP13.32□□□□□ -0.28
CPNE1-227ENST00000498056 RAPH1Q70E73 1250 aa13.32□□□□□ -0.28
CPNE1-227ENST00000498056 TAF8Q7Z7C8 310 aa13.32□□□□□ -0.28
CPNE1-227ENST00000498056 CMC1Q7Z7K0 106 aa13.32□□□□□ -0.28
CPNE1-227ENST00000498056 GATAD2AQ86YP4 633 aa13.32□□□□□ -0.28
CPNE1-227ENST00000498056 SPNS2Q8IVW8 549 aa13.32□□□□□ -0.28
CPNE1-227ENST00000498056 CPNE9Q8IYJ1 553 aa13.32□□□□□ -0.28
CPNE1-227ENST00000498056 CFAP206Q8IYR0 622 aa13.32□□□□□ -0.28
CPNE1-227ENST00000498056 FSTL5Q8N475 847 aaPredicted RBP13.32□□□□□ -0.28
CPNE1-227ENST00000498056 CD200R1Q8TD46 325 aa13.32□□□□□ -0.28
CPNE1-227ENST00000498056 SKA2Q8WVK7 121 aaPredicted RBP13.32□□□□□ -0.28
CPNE1-227ENST00000498056 GLMNQ92990 594 aa13.32□□□□□ -0.28
CPNE1-227ENST00000498056 TMEM159Q96B96 161 aa13.32□□□□□ -0.28
CPNE1-227ENST00000498056 TSPAN17Q96FV3 270 aa13.32□□□□□ -0.28
CPNE1-227ENST00000498056 LINC00615Q96LM1 132 aaPredicted RBP13.32□□□□□ -0.28
CPNE1-227ENST00000498056 SLC30A3Q99726 388 aa13.32□□□□□ -0.28
CPNE1-227ENST00000498056 SPATS2LQ9NUQ6 558 aaKnown RBP13.32□□□□□ -0.28
CPNE1-227ENST00000498056 UCKL1Q9NWZ5 548 aa13.32□□□□□ -0.28
CPNE1-227ENST00000498056 GALPQ9UBC7 116 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms