RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 MARCH9Q86YJ5 346 aa11.04□□□□□ -0.64
ERCC8-208ENST00000497892 AVL9Q8NBF6 648 aa11.04□□□□□ -0.64
ERCC8-208ENST00000497892 OR6P1Q8NGX9 317 aa11.04□□□□□ -0.64
ERCC8-208ENST00000497892 OR4L1Q8NH43 312 aa11.04□□□□□ -0.64
ERCC8-208ENST00000497892 NAT14Q8WUY8 206 aa11.04□□□□□ -0.64
ERCC8-208ENST00000497892 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.04□□□□□ -0.64
ERCC8-208ENST00000497892 DEPDC7Q96QD5 511 aa11.04□□□□□ -0.64
ERCC8-208ENST00000497892 SARS2Q9NP81 518 aaKnown RBP11.04□□□□□ -0.64
ERCC8-208ENST00000497892 WASH6PQ9NQA3 447 aa11.04□□□□□ -0.64
ERCC8-208ENST00000497892 SOX13Q9UN79 622 aa11.04□□□□□ -0.64
ERCC8-208ENST00000497892 UNC13CQ8NB66 2214 aa11.04□□□□□ -0.64
ERCC8-208ENST00000497892 MGAT4DA6NG13 374 aa11.03□□□□□ -0.64
ERCC8-208ENST00000497892 TTI1O43156 1089 aa11.03□□□□□ -0.64
ERCC8-208ENST00000497892 CSO75390 466 aaKnown RBP11.03□□□□□ -0.64
ERCC8-208ENST00000497892 F12P00748 615 aaPredicted RBP11.03□□□□□ -0.64
ERCC8-208ENST00000497892 BRAFP15056 766 aa11.03□□□□□ -0.64
ERCC8-208ENST00000497892 IVDP26440 423 aa11.03□□□□□ -0.64
ERCC8-208ENST00000497892 ARNTP27540 789 aa11.03□□□□□ -0.64
ERCC8-208ENST00000497892 RPL10P27635 214 aaKnown RBP11.03□□□□□ -0.64
ERCC8-208ENST00000497892 NMBRP28336 390 aa11.03□□□□□ -0.64
ERCC8-208ENST00000497892 NSG1P42857 185 aa11.03□□□□□ -0.64
ERCC8-208ENST00000497892 PDX1P52945 283 aa11.03□□□□□ -0.64
ERCC8-208ENST00000497892 DRG2P55039 364 aaKnown RBP11.03□□□□□ -0.64
ERCC8-208ENST00000497892 UBE2IP63279 158 aaKnown RBP11.03□□□□□ -0.64
ERCC8-208ENST00000497892 CCL7P80098 99 aa11.03□□□□□ -0.64
ERCC8-208ENST00000497892 HHEXQ03014 270 aa11.03□□□□□ -0.64
ERCC8-208ENST00000497892 BIRC2Q13490 618 aa11.03□□□□□ -0.64
ERCC8-208ENST00000497892 NFE2L1Q14494 772 aa11.03□□□□□ -0.64
ERCC8-208ENST00000497892 SEMA3AQ14563 771 aa11.03□□□□□ -0.64
ERCC8-208ENST00000497892 SEPT7Q16181 437 aaKnown RBP11.03□□□□□ -0.64
ERCC8-208ENST00000497892 ISXQ2M1V0 245 aa11.03□□□□□ -0.64
ERCC8-208ENST00000497892 AARS2Q5JTZ9 985 aaKnown RBP11.03□□□□□ -0.64
ERCC8-208ENST00000497892 LYPLAL1Q5VWZ2 237 aa11.03□□□□□ -0.64
ERCC8-208ENST00000497892 IZUMO3Q5VZ72 239 aa11.03□□□□□ -0.64
ERCC8-208ENST00000497892 METRNLQ641Q3 311 aa11.03□□□□□ -0.64
ERCC8-208ENST00000497892 KIAA0930Q6ICG6 404 aaPredicted RBP11.03□□□□□ -0.64
ERCC8-208ENST00000497892 XKR5Q6UX68 686 aa11.03□□□□□ -0.64
ERCC8-208ENST00000497892 UNQ6494/PRO21346Q6UXR6 183 aa11.03□□□□□ -0.64
ERCC8-208ENST00000497892 FAM83HQ6ZRV2 1179 aaPredicted RBP11.03□□□□□ -0.64
ERCC8-208ENST00000497892 TRIM46Q7Z4K8 759 aa11.03□□□□□ -0.64
ERCC8-208ENST00000497892 PCGF5Q86SE9 256 aa11.03□□□□□ -0.64
ERCC8-208ENST00000497892 HOOK3Q86VS8 718 aa11.03□□□□□ -0.64
ERCC8-208ENST00000497892 MPP5Q8N3R9 675 aa11.03□□□□□ -0.64
ERCC8-208ENST00000497892 CLDN19Q8N6F1 224 aa11.03□□□□□ -0.64
ERCC8-208ENST00000497892 Q8N9G6 341 aaPredicted RBP11.03□□□□□ -0.64
ERCC8-208ENST00000497892 SPATA4Q8NEY3 305 aa11.03□□□□□ -0.64
ERCC8-208ENST00000497892 OR2L2Q8NH16 312 aa11.03□□□□□ -0.64
ERCC8-208ENST00000497892 MFSD3Q96ES6 412 aa11.03□□□□□ -0.64
ERCC8-208ENST00000497892 GFM1Q96RP9 751 aaKnown RBP11.03□□□□□ -0.64
ERCC8-208ENST00000497892 KRT12Q99456 494 aa11.03□□□□□ -0.64
ERCC8-208ENST00000497892 LRRN3Q9H3W5 708 aa11.03□□□□□ -0.64
ERCC8-208ENST00000497892 STN1Q9H668 368 aaKnown RBP11.03□□□□□ -0.64
ERCC8-208ENST00000497892 SYNDIG1Q9H7V2 258 aa11.03□□□□□ -0.64
ERCC8-208ENST00000497892 CATSPERZQ9NTU4 200 aa11.03□□□□□ -0.64
ERCC8-208ENST00000497892 SCHIP1Q9P0W5 487 aaPredicted RBP11.03□□□□□ -0.64
ERCC8-208ENST00000497892 MARCH4Q9P2E8 410 aaPredicted RBP11.03□□□□□ -0.64
ERCC8-208ENST00000497892 CPNE7Q9UBL6 633 aa11.03□□□□□ -0.64
ERCC8-208ENST00000497892 EPG5Q9HCE0 2579 aa11.03□□□□□ -0.64
ERCC8-208ENST00000497892 USP24Q9UPU5 2620 aa11.03□□□□□ -0.64
ERCC8-208ENST00000497892 TRBV23OR9-2A0A075B6M9 112 aa11.02□□□□□ -0.65
ERCC8-208ENST00000497892 FAM237BA0A1B0GVD1 139 aa11.02□□□□□ -0.65
ERCC8-208ENST00000497892 MAGEB16A2A368 324 aa11.02□□□□□ -0.65
ERCC8-208ENST00000497892 SDR42E2A6NKP2 422 aa11.02□□□□□ -0.65
ERCC8-208ENST00000497892 C1QTNF9BB2RNN3 333 aa11.02□□□□□ -0.65
ERCC8-208ENST00000497892 QSOX1O00391 747 aa11.02□□□□□ -0.65
ERCC8-208ENST00000497892 TERTO14746 1132 aaKnown RBP11.02□□□□□ -0.65
ERCC8-208ENST00000497892 ZW10O43264 779 aa11.02□□□□□ -0.65
ERCC8-208ENST00000497892 B4GAT1O43505 415 aa11.02□□□□□ -0.65
ERCC8-208ENST00000497892 AP2A2O94973 939 aa11.02□□□□□ -0.65
ERCC8-208ENST00000497892 GSTM1P09488 218 aa11.02□□□□□ -0.65
ERCC8-208ENST00000497892 C1QTNF9P0C862 333 aa11.02□□□□□ -0.65
ERCC8-208ENST00000497892 XRCC1P18887 633 aaPredicted RBP11.02□□□□□ -0.65
ERCC8-208ENST00000497892 PBLDP30039 288 aaPredicted RBP11.02□□□□□ -0.65
ERCC8-208ENST00000497892 OR1D5P58170 312 aa11.02□□□□□ -0.65
ERCC8-208ENST00000497892 GSTM4Q03013 218 aa11.02□□□□□ -0.65
ERCC8-208ENST00000497892 MORF4L2Q15014 288 aa11.02□□□□□ -0.65
ERCC8-208ENST00000497892 CLPPQ16740 277 aaPredicted RBP11.02□□□□□ -0.65
ERCC8-208ENST00000497892 ZNF658BQ4V348 819 aaPredicted RBP11.02□□□□□ -0.65
ERCC8-208ENST00000497892 FASTKD1Q53R41 847 aaKnown RBP11.02□□□□□ -0.65
ERCC8-208ENST00000497892 LCE2CQ5TA81 110 aa11.02□□□□□ -0.65
ERCC8-208ENST00000497892 CASC4Q6P4E1 433 aa11.02□□□□□ -0.65
ERCC8-208ENST00000497892 CES3Q6UWW8 571 aa11.02□□□□□ -0.65
ERCC8-208ENST00000497892 ZNF572Q7Z3I7 529 aaPredicted RBP11.02□□□□□ -0.65
ERCC8-208ENST00000497892 SLC9B2Q86UD5 537 aa11.02□□□□□ -0.65
ERCC8-208ENST00000497892 AGGF1Q8N302 714 aaeCLIP11.02□□□□□ -0.65
ERCC8-208ENST00000497892 HM13Q8TCT9 377 aa11.02□□□□□ -0.65
ERCC8-208ENST00000497892 SH3KBP1Q96B97 665 aa11.02□□□□□ -0.65
ERCC8-208ENST00000497892 GRAMD1AQ96CP6 724 aa11.02□□□□□ -0.65
ERCC8-208ENST00000497892 TRIM44Q96DX7 344 aaPredicted RBP11.02□□□□□ -0.65
ERCC8-208ENST00000497892 TTC1Q99614 292 aa11.02□□□□□ -0.65
ERCC8-208ENST00000497892 TRIM56Q9BRZ2 755 aaKnown RBP11.02□□□□□ -0.65
ERCC8-208ENST00000497892 TRIM51Q9BSJ1 452 aa11.02□□□□□ -0.65
ERCC8-208ENST00000497892 VPS37BQ9H9H4 285 aa11.02□□□□□ -0.65
ERCC8-208ENST00000497892 SLC24A3Q9HC58 644 aa11.02□□□□□ -0.65
ERCC8-208ENST00000497892 POT1Q9NUX5 634 aa11.02□□□□□ -0.65
ERCC8-208ENST00000497892 SAMD15Q9P1V8 674 aa11.02□□□□□ -0.65
ERCC8-208ENST00000497892 MAP10Q9P2G4 905 aa11.02□□□□□ -0.65
ERCC8-208ENST00000497892 ZNF624Q9P2J8 865 aaPredicted RBP11.02□□□□□ -0.65
ERCC8-208ENST00000497892 WDR37Q9Y2I8 494 aa11.02□□□□□ -0.65
ERCC8-208ENST00000497892 PCDHB1Q9Y5F3 818 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms