RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 FKRPQ9H9S5 495 aa4.6□□□□□ -1.67
VPS36-206ENST00000497149 TRPV2Q9Y5S1 764 aa4.6□□□□□ -1.67
VPS36-206ENST00000497149 C5orf60A6NFR6 353 aa4.59□□□□□ -1.67
VPS36-206ENST00000497149 C15orf62A8K5M9 175 aa4.59□□□□□ -1.67
VPS36-206ENST00000497149 TO15178 435 aa4.59□□□□□ -1.67
VPS36-206ENST00000497149 SSX4O60224 188 aa4.59□□□□□ -1.67
VPS36-206ENST00000497149 PRAMEF11O60813 436 aa4.59□□□□□ -1.67
VPS36-206ENST00000497149 ABCB1P08183 1280 aaPredicted RBP4.59□□□□□ -1.67
VPS36-206ENST00000497149 ZNF132P52740 706 aa4.59□□□□□ -1.67
VPS36-206ENST00000497149 AIMP1Q12904 312 aaKnown RBP4.59□□□□□ -1.67
VPS36-206ENST00000497149 ILF3Q12906 894 aaKnown RBP eCLIP4.59□□□□□ -1.67
VPS36-206ENST00000497149 KIAA1161Q6NSJ0 714 aa4.59□□□□□ -1.67
VPS36-206ENST00000497149 TEX38Q6PEX7 206 aa4.59□□□□□ -1.67
VPS36-206ENST00000497149 EXOC3L1Q86VI1 746 aa4.59□□□□□ -1.67
VPS36-206ENST00000497149 NAGSQ8N159 534 aa4.59□□□□□ -1.67
VPS36-206ENST00000497149 FBXO39Q8N4B4 442 aa4.59□□□□□ -1.67
VPS36-206ENST00000497149 RDM1Q8NG50 284 aa4.59□□□□□ -1.67
VPS36-206ENST00000497149 SPATA20Q8TB22 786 aa4.59□□□□□ -1.67
VPS36-206ENST00000497149 PRMT6Q96LA8 375 aaPredicted RBP4.59□□□□□ -1.67
VPS36-206ENST00000497149 CCDC106Q9BWC9 280 aa4.59□□□□□ -1.67
VPS36-206ENST00000497149 MBNL1Q9NR56 388 aaKnown RBP4.59□□□□□ -1.67
VPS36-206ENST00000497149 TAB2Q9NYJ8 693 aa4.59□□□□□ -1.67
VPS36-206ENST00000497149 ANAPC2Q9UJX6 822 aa4.59□□□□□ -1.67
VPS36-206ENST00000497149 ZNF711Q9Y462 761 aa4.59□□□□□ -1.67
VPS36-206ENST00000497149 A0A1B0GUV1 79 aa4.58□□□□□ -1.68
VPS36-206ENST00000497149 A0A1W2PS18 150 aa4.58□□□□□ -1.68
VPS36-206ENST00000497149 TGFB3P10600 412 aa4.58□□□□□ -1.68
VPS36-206ENST00000497149 ZNF23P17027 643 aa4.58□□□□□ -1.68
VPS36-206ENST00000497149 AHRP35869 848 aa4.58□□□□□ -1.68
VPS36-206ENST00000497149 MATR3P43243 847 aaKnown RBP eCLIP4.58□□□□□ -1.68
VPS36-206ENST00000497149 MLLT10P55197 1068 aa4.58□□□□□ -1.68
VPS36-206ENST00000497149 RASA2Q15283 850 aa4.58□□□□□ -1.68
VPS36-206ENST00000497149 CBWD6Q4V339 395 aa4.58□□□□□ -1.68
VPS36-206ENST00000497149 CBWD3Q5JTY5 395 aa4.58□□□□□ -1.68
VPS36-206ENST00000497149 GCNT6Q5T4J0 391 aa4.58□□□□□ -1.68
VPS36-206ENST00000497149 STXBP5Q5T5C0 1151 aa4.58□□□□□ -1.68
VPS36-206ENST00000497149 RPUSD3Q6P087 351 aaKnown RBP4.58□□□□□ -1.68
VPS36-206ENST00000497149 PLXDC2Q6UX71 529 aa4.58□□□□□ -1.68
VPS36-206ENST00000497149 DSG4Q86SJ6 1040 aa4.58□□□□□ -1.68
VPS36-206ENST00000497149 POC1AQ8NBT0 407 aa4.58□□□□□ -1.68
VPS36-206ENST00000497149 CCDC191Q8NCU4 936 aa4.58□□□□□ -1.68
VPS36-206ENST00000497149 RBM15BQ8NDT2 890 aaKnown RBP4.58□□□□□ -1.68
VPS36-206ENST00000497149 SECTM1Q8WVN6 248 aa4.58□□□□□ -1.68
VPS36-206ENST00000497149 SMPDL3BQ92485 455 aa4.58□□□□□ -1.68
VPS36-206ENST00000497149 LINGO1Q96FE5 620 aa4.58□□□□□ -1.68
VPS36-206ENST00000497149 FAM81BQ96LP2 452 aa4.58□□□□□ -1.68
VPS36-206ENST00000497149 OR6C1Q96RD1 312 aa4.58□□□□□ -1.68
VPS36-206ENST00000497149 C16orf70Q9BSU1 422 aa4.58□□□□□ -1.68
VPS36-206ENST00000497149 POLR3CQ9BUI4 534 aaPredicted RBP4.58□□□□□ -1.68
VPS36-206ENST00000497149 RETREG1Q9H6L5 497 aa4.58□□□□□ -1.68
VPS36-206ENST00000497149 SLA2Q9H6Q3 261 aa4.58□□□□□ -1.68
VPS36-206ENST00000497149 HHATLQ9HCP6 504 aa4.58□□□□□ -1.68
VPS36-206ENST00000497149 TCRBV21S2A2A0A5A6 115 aa4.57□□□□□ -1.68
VPS36-206ENST00000497149 HEPACAM2A8MVW5 462 aa4.57□□□□□ -1.68
VPS36-206ENST00000497149 UBE2CO00762 179 aa4.57□□□□□ -1.68
VPS36-206ENST00000497149 DVL1O14640 695 aa4.57□□□□□ -1.68
VPS36-206ENST00000497149 GCNT3O95395 438 aa4.57□□□□□ -1.68
VPS36-206ENST00000497149 TFAP2AP05549 437 aa4.57□□□□□ -1.68
VPS36-206ENST00000497149 KRT19P08727 400 aa4.57□□□□□ -1.68
VPS36-206ENST00000497149 GABRA5P31644 462 aa4.57□□□□□ -1.68
VPS36-206ENST00000497149 CAPZA2P47755 286 aa4.57□□□□□ -1.68
VPS36-206ENST00000497149 TERF1P54274 439 aa4.57□□□□□ -1.68
VPS36-206ENST00000497149 CDH13P55290 713 aa4.57□□□□□ -1.68
VPS36-206ENST00000497149 UBXN2AP68543 259 aa4.57□□□□□ -1.68
VPS36-206ENST00000497149 RPL24P83731 157 aaKnown RBP4.57□□□□□ -1.68
VPS36-206ENST00000497149 CDK3Q00526 305 aa4.57□□□□□ -1.68
VPS36-206ENST00000497149 TROAPQ12815 778 aa4.57□□□□□ -1.68
VPS36-206ENST00000497149 SNTB1Q13884 538 aaKnown RBP4.57□□□□□ -1.68
VPS36-206ENST00000497149 SNAPC1Q16533 368 aa4.57□□□□□ -1.68
VPS36-206ENST00000497149 C9orf152Q5JTZ5 239 aa4.57□□□□□ -1.68
VPS36-206ENST00000497149 ERMARDQ5T6L9 678 aa4.57□□□□□ -1.68
VPS36-206ENST00000497149 LCE1AQ5T7P2 110 aa4.57□□□□□ -1.68
VPS36-206ENST00000497149 TMEM211Q6ICI0 200 aa4.57□□□□□ -1.68
VPS36-206ENST00000497149 FIGLAQ6QHK4 219 aa4.57□□□□□ -1.68
VPS36-206ENST00000497149 DENND5BQ6ZUT9 1274 aa4.57□□□□□ -1.68
VPS36-206ENST00000497149 SLC9B2Q86UD5 537 aa4.57□□□□□ -1.68
VPS36-206ENST00000497149 TSPAN14Q8NG11 270 aa4.57□□□□□ -1.68
VPS36-206ENST00000497149 OR10S1Q8NGN2 331 aa4.57□□□□□ -1.68
VPS36-206ENST00000497149 CFAP61Q8NHU2 1237 aa4.57□□□□□ -1.68
VPS36-206ENST00000497149 SEMA4DQ92854 862 aa4.57□□□□□ -1.68
VPS36-206ENST00000497149 OXNAD1Q96HP4 312 aaPredicted RBP4.57□□□□□ -1.68
VPS36-206ENST00000497149 ABHD8Q96I13 439 aa4.57□□□□□ -1.68
VPS36-206ENST00000497149 ZNF582Q96NG8 517 aaPredicted RBP4.57□□□□□ -1.68
VPS36-206ENST00000497149 PKP4Q99569 1192 aa4.57□□□□□ -1.68
VPS36-206ENST00000497149 LRRC1Q9BTT6 524 aa4.57□□□□□ -1.68
VPS36-206ENST00000497149 MOV10L1Q9BXT6 1211 aaKnown RBP4.57□□□□□ -1.68
VPS36-206ENST00000497149 GOLPH3LQ9H4A5 285 aa4.57□□□□□ -1.68
VPS36-206ENST00000497149 TRPC7Q9HCX4 862 aa4.57□□□□□ -1.68
VPS36-206ENST00000497149 HAO2Q9NYQ3 351 aa4.57□□□□□ -1.68
VPS36-206ENST00000497149 A0A0G2JNG1 304 aa4.56□□□□□ -1.68
VPS36-206ENST00000497149 GPR137BO60478 399 aa4.56□□□□□ -1.68
VPS36-206ENST00000497149 PSMD10O75832 226 aa4.56□□□□□ -1.68
VPS36-206ENST00000497149 LDLRP01130 860 aa4.56□□□□□ -1.68
VPS36-206ENST00000497149 ITGB6P18564 788 aa4.56□□□□□ -1.68
VPS36-206ENST00000497149 DGKAP23743 735 aa4.56□□□□□ -1.68
VPS36-206ENST00000497149 POU3F1Q03052 451 aaPredicted RBP4.56□□□□□ -1.68
VPS36-206ENST00000497149 ALCAMQ13740 583 aa4.56□□□□□ -1.68
VPS36-206ENST00000497149 IL11RAQ14626 422 aa4.56□□□□□ -1.68
VPS36-206ENST00000497149 KIR2DS5Q14953 304 aa4.56□□□□□ -1.68
VPS36-206ENST00000497149 NR1D2Q14995 579 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms