RNA–Protein interactions for RNA: ENST00000496677.5

CLDN12-213, Transcript of claudin 12, humanhuman

TSL 1 (best)

Gene CLDN12, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-213ENST00000496677 UBE2Q2Q8WVN8 375 aa12.12□□□□□ -0.47
CLDN12-213ENST00000496677 JPH3Q8WXH2 748 aaPredicted RBP12.12□□□□□ -0.47
CLDN12-213ENST00000496677 KLHL6Q8WZ60 621 aa12.12□□□□□ -0.47
CLDN12-213ENST00000496677 RSC1A1Q92681 617 aa12.12□□□□□ -0.47
CLDN12-213ENST00000496677 CXorf40BQ96DE9 158 aa12.12□□□□□ -0.47
CLDN12-213ENST00000496677 INSM2Q96T92 566 aaPredicted RBP12.12□□□□□ -0.47
CLDN12-213ENST00000496677 CTRCQ99895 268 aa12.12□□□□□ -0.47
CLDN12-213ENST00000496677 ZPBPQ9BS86 351 aa12.12□□□□□ -0.47
CLDN12-213ENST00000496677 TMEM121Q9BTD3 319 aa12.12□□□□□ -0.47
CLDN12-213ENST00000496677 KLHL3Q9UH77 587 aa12.12□□□□□ -0.47
CLDN12-213ENST00000496677 KLHL33A6NCF5 533 aa12.11□□□□□ -0.47
CLDN12-213ENST00000496677 GOLGA6L9A6NEM1 432 aa12.11□□□□□ -0.47
CLDN12-213ENST00000496677 RAD1O60671 282 aa12.11□□□□□ -0.47
CLDN12-213ENST00000496677 DLGAP3O95886 979 aa12.11□□□□□ -0.47
CLDN12-213ENST00000496677 LIFP15018 202 aa12.11□□□□□ -0.47
CLDN12-213ENST00000496677 AMD1P17707 334 aa12.11□□□□□ -0.47
CLDN12-213ENST00000496677 TPH1P17752 444 aa12.11□□□□□ -0.47
CLDN12-213ENST00000496677 HALP42357 657 aa12.11□□□□□ -0.47
CLDN12-213ENST00000496677 CAPZBP47756 277 aa12.11□□□□□ -0.47
CLDN12-213ENST00000496677 CDKN1CP49918 316 aaPredicted RBP12.11□□□□□ -0.47
CLDN12-213ENST00000496677 CYP4F2P78329 520 aa12.11□□□□□ -0.47
CLDN12-213ENST00000496677 OASLQ15646 514 aaKnown RBP12.11□□□□□ -0.47
CLDN12-213ENST00000496677 TBR1Q16650 682 aa12.11□□□□□ -0.47
CLDN12-213ENST00000496677 LONRF2Q1L5Z9 754 aa12.11□□□□□ -0.47
CLDN12-213ENST00000496677 CAPRIN2Q6IMN6 1127 aaKnown RBP12.11□□□□□ -0.47
CLDN12-213ENST00000496677 CEACAM20Q6UY09 585 aa12.11□□□□□ -0.47
CLDN12-213ENST00000496677 ARHGEF18Q6ZSZ5 1173 aa12.11□□□□□ -0.47
CLDN12-213ENST00000496677 DET1Q7L5Y6 550 aa12.11□□□□□ -0.47
CLDN12-213ENST00000496677 CACNA2D3Q8IZS8 1091 aa12.11□□□□□ -0.47
CLDN12-213ENST00000496677 NXPE1Q8N323 547 aa12.11□□□□□ -0.47
CLDN12-213ENST00000496677 MED8Q96G25 268 aa12.11□□□□□ -0.47
CLDN12-213ENST00000496677 DNAJC1Q96KC8 554 aaKnown RBP12.11□□□□□ -0.47
CLDN12-213ENST00000496677 TGM7Q96PF1 710 aa12.11□□□□□ -0.47
CLDN12-213ENST00000496677 ZNF768Q9H5H4 540 aaKnown RBP12.11□□□□□ -0.47
CLDN12-213ENST00000496677 FAM96AQ9H5X1 160 aa12.11□□□□□ -0.47
CLDN12-213ENST00000496677 NLE1Q9NVX2 485 aaPredicted RBP12.11□□□□□ -0.47
CLDN12-213ENST00000496677 ACSL5Q9ULC5 683 aa12.11□□□□□ -0.47
CLDN12-213ENST00000496677 PSMD13Q9UNM6 376 aa12.11□□□□□ -0.47
CLDN12-213ENST00000496677 C17orf113A0A1B0GUU1 675 aa12.1□□□□□ -0.47
CLDN12-213ENST00000496677 MROH6A6NGR9 719 aa12.1□□□□□ -0.47
CLDN12-213ENST00000496677 CCL22O00626 93 aa12.1□□□□□ -0.47
CLDN12-213ENST00000496677 AP2A1O95782 977 aa12.1□□□□□ -0.47
CLDN12-213ENST00000496677 MTHFD1P11586 935 aaKnown RBP12.1□□□□□ -0.47
CLDN12-213ENST00000496677 MAP4P27816 1152 aaKnown RBP12.1□□□□□ -0.47
CLDN12-213ENST00000496677 HADHAP40939 763 aa12.1□□□□□ -0.47
CLDN12-213ENST00000496677 PPM1FP49593 454 aaPredicted RBP12.1□□□□□ -0.47
CLDN12-213ENST00000496677 PRLHRP49683 370 aa12.1□□□□□ -0.47
CLDN12-213ENST00000496677 ATP1A2P50993 1020 aa12.1□□□□□ -0.47
CLDN12-213ENST00000496677 PPP1CAP62136 330 aa12.1□□□□□ -0.47
CLDN12-213ENST00000496677 SH3BP2P78314 561 aa12.1□□□□□ -0.47
CLDN12-213ENST00000496677 TMPRSS15P98073 1019 aa12.1□□□□□ -0.47
CLDN12-213ENST00000496677 GPR33Q49SQ1 333 aa12.1□□□□□ -0.47
CLDN12-213ENST00000496677 SNX20Q7Z614 316 aa12.1□□□□□ -0.47
CLDN12-213ENST00000496677 LILRA3Q8N6C8 439 aaPredicted RBP12.1□□□□□ -0.47
CLDN12-213ENST00000496677 ZFPM2Q8WW38 1151 aa12.1□□□□□ -0.47
CLDN12-213ENST00000496677 ATG4AQ8WYN0 398 aa12.1□□□□□ -0.47
CLDN12-213ENST00000496677 ULK4Q96C45 1275 aa12.1□□□□□ -0.47
CLDN12-213ENST00000496677 SLC41A2Q96JW4 573 aa12.1□□□□□ -0.47
CLDN12-213ENST00000496677 WWP1Q9H0M0 922 aa12.1□□□□□ -0.47
CLDN12-213ENST00000496677 LRRC40Q9H9A6 602 aa12.1□□□□□ -0.47
CLDN12-213ENST00000496677 LOC101059948A0A1B0GTJ6 334 aa12.09□□□□□ -0.47
CLDN12-213ENST00000496677 GOLGA6L3A6NEY3 463 aa12.09□□□□□ -0.47
CLDN12-213ENST00000496677 POLR1CO15160 346 aaPredicted RBP12.09□□□□□ -0.47
CLDN12-213ENST00000496677 PSMD3O43242 534 aa12.09□□□□□ -0.47
CLDN12-213ENST00000496677 LIASO43766 372 aa12.09□□□□□ -0.47
CLDN12-213ENST00000496677 STK17BO94768 372 aa12.09□□□□□ -0.47
CLDN12-213ENST00000496677 PRSS56P0CW18 603 aa12.09□□□□□ -0.47
CLDN12-213ENST00000496677 ATP1B2P14415 290 aaPredicted RBP12.09□□□□□ -0.47
CLDN12-213ENST00000496677 ZNF28P17035 718 aa12.09□□□□□ -0.47
CLDN12-213ENST00000496677 ITGB6P18564 788 aa12.09□□□□□ -0.47
CLDN12-213ENST00000496677 NELFEP18615 380 aaKnown RBP12.09□□□□□ -0.47
CLDN12-213ENST00000496677 PBLDP30039 288 aaPredicted RBP12.09□□□□□ -0.47
CLDN12-213ENST00000496677 AKT1P31749 480 aa12.09□□□□□ -0.47
CLDN12-213ENST00000496677 STIP1P31948 543 aaKnown RBP12.09□□□□□ -0.47
CLDN12-213ENST00000496677 MC4RP32245 332 aa12.09□□□□□ -0.47
CLDN12-213ENST00000496677 MAP7Q14244 749 aa12.09□□□□□ -0.47
CLDN12-213ENST00000496677 IL11RAQ14626 422 aa12.09□□□□□ -0.47
CLDN12-213ENST00000496677 SIX1Q15475 284 aaPredicted RBP12.09□□□□□ -0.47
CLDN12-213ENST00000496677 P3H1Q32P28 736 aa12.09□□□□□ -0.47
CLDN12-213ENST00000496677 MEI1Q5TIA1 1274 aa12.09□□□□□ -0.47
CLDN12-213ENST00000496677 ZNF662Q6ZS27 426 aa12.09□□□□□ -0.47
CLDN12-213ENST00000496677 SLC13A5Q86YT5 568 aaPredicted RBP12.09□□□□□ -0.47
CLDN12-213ENST00000496677 PIANPQ8IYJ0 282 aa12.09□□□□□ -0.47
CLDN12-213ENST00000496677 CFAP206Q8IYR0 622 aa12.09□□□□□ -0.47
CLDN12-213ENST00000496677 NLGN4XQ8N0W4 816 aa12.09□□□□□ -0.47
CLDN12-213ENST00000496677 ZSCAN1Q8NBB4 408 aa12.09□□□□□ -0.47
CLDN12-213ENST00000496677 NLGN4YQ8NFZ3 816 aaPredicted RBP12.09□□□□□ -0.47
CLDN12-213ENST00000496677 STYXQ8WUJ0 223 aa12.09□□□□□ -0.47
CLDN12-213ENST00000496677 HEXDCQ8WVB3 486 aa12.09□□□□□ -0.47
CLDN12-213ENST00000496677 EXTL1Q92935 676 aa12.09□□□□□ -0.47
CLDN12-213ENST00000496677 ZDHHC12Q96GR4 267 aa12.09□□□□□ -0.47
CLDN12-213ENST00000496677 CDKN2AIPNLQ96HQ2 116 aa12.09□□□□□ -0.47
CLDN12-213ENST00000496677 SLC45A3Q96JT2 553 aa12.09□□□□□ -0.47
CLDN12-213ENST00000496677 COPS8Q99627 209 aa12.09□□□□□ -0.47
CLDN12-213ENST00000496677 FRMD8P1Q9BZ68 369 aaPredicted RBP12.09□□□□□ -0.47
CLDN12-213ENST00000496677 ZMYND15Q9H091 742 aa12.09□□□□□ -0.47
CLDN12-213ENST00000496677 WDR70Q9NW82 654 aa12.09□□□□□ -0.47
CLDN12-213ENST00000496677 ZDHHC3Q9NYG2 299 aa12.09□□□□□ -0.47
CLDN12-213ENST00000496677 CFAP20Q9Y6A4 193 aaKnown RBP12.09□□□□□ -0.47
CLDN12-213ENST00000496677 TLN1Q9Y490 2541 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms