RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 ZNF548Q8NEK5 533 aaPredicted RBP21.38■■□□□ 1.01
C9orf3-222ENST00000496567 LMX1AQ8TE12 382 aa21.38■■□□□ 1.01
C9orf3-222ENST00000496567 ELMO1Q92556 727 aa21.38■■□□□ 1.01
C9orf3-222ENST00000496567 GPR22Q99680 433 aa21.38■■□□□ 1.01
C9orf3-222ENST00000496567 DHRS4Q9BTZ2 278 aa21.38■■□□□ 1.01
C9orf3-222ENST00000496567 LATS2Q9NRM7 1088 aa21.38■■□□□ 1.01
C9orf3-222ENST00000496567 KCNK6Q9Y257 313 aa21.38■■□□□ 1.01
C9orf3-222ENST00000496567 DNAJC16Q9Y2G8 782 aa21.38■■□□□ 1.01
C9orf3-222ENST00000496567 CSNK1G3Q9Y6M4 447 aa21.38■■□□□ 1.01
C9orf3-222ENST00000496567 NEMP2A6NFY4 417 aa21.37■■□□□ 1.01
C9orf3-222ENST00000496567 LIN7AO14910 233 aaPredicted RBP21.37■■□□□ 1.01
C9orf3-222ENST00000496567 TCEA3O75764 348 aa21.37■■□□□ 1.01
C9orf3-222ENST00000496567 DGKAP23743 735 aa21.37■■□□□ 1.01
C9orf3-222ENST00000496567 EPHA8P29322 1005 aaPredicted RBP21.37■■□□□ 1.01
C9orf3-222ENST00000496567 SKIV2L2P42285 1042 aaKnown RBP21.37■■□□□ 1.01
C9orf3-222ENST00000496567 POU4F1Q01851 419 aa21.37■■□□□ 1.01
C9orf3-222ENST00000496567 PLOD1Q02809 727 aaPredicted RBP21.37■■□□□ 1.01
C9orf3-222ENST00000496567 C1orf61Q13536 156 aa21.37■■□□□ 1.01
C9orf3-222ENST00000496567 SHBQ15464 509 aa21.37■■□□□ 1.01
C9orf3-222ENST00000496567 ADGRD1Q6QNK2 874 aa21.37■■□□□ 1.01
C9orf3-222ENST00000496567 TAF8Q7Z7C8 310 aa21.37■■□□□ 1.01
C9orf3-222ENST00000496567 DCAKDQ8WVC6 231 aa21.37■■□□□ 1.01
C9orf3-222ENST00000496567 IL21RQ9HBE5 538 aa21.37■■□□□ 1.01
C9orf3-222ENST00000496567 SARS2Q9NP81 518 aaKnown RBP21.37■■□□□ 1.01
C9orf3-222ENST00000496567 KLHL42Q9P2K6 505 aa21.37■■□□□ 1.01
C9orf3-222ENST00000496567 PSMC3IPQ9P2W1 217 aaPredicted RBP21.37■■□□□ 1.01
C9orf3-222ENST00000496567 DOLKQ9UPQ8 538 aa21.37■■□□□ 1.01
C9orf3-222ENST00000496567 PLAAQ9Y263 795 aa21.37■■□□□ 1.01
C9orf3-222ENST00000496567 MTO1Q9Y2Z2 717 aaKnown RBP21.37■■□□□ 1.01
C9orf3-222ENST00000496567 PLEKHM1Q9Y4G2 1056 aa21.37■■□□□ 1.01
C9orf3-222ENST00000496567 SDC3O75056 442 aa21.36■■□□□ 1.01
C9orf3-222ENST00000496567 APOA4P06727 396 aa21.36■■□□□ 1.01
C9orf3-222ENST00000496567 ZNF883P0CG24 379 aa21.36■■□□□ 1.01
C9orf3-222ENST00000496567 AOAHP28039 575 aa21.36■■□□□ 1.01
C9orf3-222ENST00000496567 CCR7P32248 378 aa21.36■■□□□ 1.01
C9orf3-222ENST00000496567 ACTR1BP42025 376 aa21.36■■□□□ 1.01
C9orf3-222ENST00000496567 SLC12A2P55011 1212 aa21.36■■□□□ 1.01
C9orf3-222ENST00000496567 ACTR1AP61163 376 aa21.36■■□□□ 1.01
C9orf3-222ENST00000496567 BNIP3Q12983 259 aa21.36■■□□□ 1.01
C9orf3-222ENST00000496567 TMED2Q15363 201 aa21.36■■□□□ 1.01
C9orf3-222ENST00000496567 SYTL3Q4VX76 610 aa21.36■■□□□ 1.01
C9orf3-222ENST00000496567 CFAP206Q8IYR0 622 aa21.36■■□□□ 1.01
C9orf3-222ENST00000496567 CCL4L1Q8NHW4 92 aa21.36■■□□□ 1.01
C9orf3-222ENST00000496567 LKAAEAR1Q8TD35 194 aa21.36■■□□□ 1.01
C9orf3-222ENST00000496567 ASZ1Q8WWH4 475 aa21.36■■□□□ 1.01
C9orf3-222ENST00000496567 ROPN1BQ9BZX4 212 aaPredicted RBP21.36■■□□□ 1.01
C9orf3-222ENST00000496567 OSGEPL1Q9H4B0 414 aa21.36■■□□□ 1.01
C9orf3-222ENST00000496567 ROPN1Q9HAT0 212 aaPredicted RBP21.36■■□□□ 1.01
C9orf3-222ENST00000496567 ACSL5Q9ULC5 683 aa21.36■■□□□ 1.01
C9orf3-222ENST00000496567 MED16Q9Y2X0 877 aa21.36■■□□□ 1.01
C9orf3-222ENST00000496567 TDRD6O60522 2096 aaKnown RBP21.36■■□□□ 1.01
C9orf3-222ENST00000496567 KRT37O76014 449 aa21.36■■□□□ 1.01
C9orf3-222ENST00000496567 IDSP22304 550 aa21.36■■□□□ 1.01
C9orf3-222ENST00000496567 AK4P27144 223 aaPredicted RBP21.36■■□□□ 1.01
C9orf3-222ENST00000496567 GCAP28676 217 aa21.36■■□□□ 1.01
C9orf3-222ENST00000496567 RPA4Q13156 261 aa21.36■■□□□ 1.01
C9orf3-222ENST00000496567 BOP1Q14137 746 aaKnown RBP21.36■■□□□ 1.01
C9orf3-222ENST00000496567 NFE2L1Q14494 772 aa21.36■■□□□ 1.01
C9orf3-222ENST00000496567 TCEA2Q15560 299 aa21.36■■□□□ 1.01
C9orf3-222ENST00000496567 METRNLQ641Q3 311 aa21.36■■□□□ 1.01
C9orf3-222ENST00000496567 SLC30A9Q6PML9 568 aa21.36■■□□□ 1.01
C9orf3-222ENST00000496567 LVRNQ6Q4G3 990 aa21.36■■□□□ 1.01
C9orf3-222ENST00000496567 NRROSQ86YC3 692 aa21.36■■□□□ 1.01
C9orf3-222ENST00000496567 TDRPQ86YL5 185 aa21.36■■□□□ 1.01
C9orf3-222ENST00000496567 TMEM159Q96B96 161 aa21.36■■□□□ 1.01
C9orf3-222ENST00000496567 TSPAN17Q96FV3 270 aa21.36■■□□□ 1.01
C9orf3-222ENST00000496567 PHOX2BQ99453 314 aa21.36■■□□□ 1.01
C9orf3-222ENST00000496567 GPR21Q99679 349 aa21.36■■□□□ 1.01
C9orf3-222ENST00000496567 COG4Q9H9E3 785 aa21.36■■□□□ 1.01
C9orf3-222ENST00000496567 PARD6AQ9NPB6 346 aa21.36■■□□□ 1.01
C9orf3-222ENST00000496567 GULP1Q9UBP9 304 aa21.36■■□□□ 1.01
C9orf3-222ENST00000496567 FAM8A1Q9UBU6 413 aa21.36■■□□□ 1.01
C9orf3-222ENST00000496567 TRMT6Q9UJA5 497 aaKnown RBP21.36■■□□□ 1.01
C9orf3-222ENST00000496567 SLC39A10Q9ULF5 831 aa21.36■■□□□ 1.01
C9orf3-222ENST00000496567 DHRS7Q9Y394 339 aa21.36■■□□□ 1.01
C9orf3-222ENST00000496567 ST14Q9Y5Y6 855 aa21.36■■□□□ 1.01
C9orf3-222ENST00000496567 LMO7DNF2Z398 122 aa21.35■■□□□ 1.01
C9orf3-222ENST00000496567 SAT1P21673 171 aa21.35■■□□□ 1.01
C9orf3-222ENST00000496567 FDXRP22570 491 aa21.35■■□□□ 1.01
C9orf3-222ENST00000496567 CLCN7P51798 805 aa21.35■■□□□ 1.01
C9orf3-222ENST00000496567 CDKN2DP55273 166 aa21.35■■□□□ 1.01
C9orf3-222ENST00000496567 IL9RQ01113 521 aa21.35■■□□□ 1.01
C9orf3-222ENST00000496567 USP10Q14694 798 aaKnown RBP21.35■■□□□ 1.01
C9orf3-222ENST00000496567 RASA2Q15283 850 aa21.35■■□□□ 1.01
C9orf3-222ENST00000496567 TTLL9Q3SXZ7 439 aa21.35■■□□□ 1.01
C9orf3-222ENST00000496567 ZNF658BQ4V348 819 aaPredicted RBP21.35■■□□□ 1.01
C9orf3-222ENST00000496567 PLEKHS1Q5SXH7 462 aa21.35■■□□□ 1.01
C9orf3-222ENST00000496567 MROH9Q5TGP6 573 aa21.35■■□□□ 1.01
C9orf3-222ENST00000496567 PRR23CQ6ZRP0 262 aa21.35■■□□□ 1.01
C9orf3-222ENST00000496567 DCLK2Q8N568 766 aa21.35■■□□□ 1.01
C9orf3-222ENST00000496567 ZBTB2Q8N680 514 aa21.35■■□□□ 1.01
C9orf3-222ENST00000496567 OR2I1PQ8NGU4 316 aa21.35■■□□□ 1.01
C9orf3-222ENST00000496567 OR2W6PQ8NHA6 318 aa21.35■■□□□ 1.01
C9orf3-222ENST00000496567 SAP25Q8TEE9 199 aa21.35■■□□□ 1.01
C9orf3-222ENST00000496567 INPP5DQ92835 1189 aa21.35■■□□□ 1.01
C9orf3-222ENST00000496567 FAM136AQ96C01 138 aa21.35■■□□□ 1.01
C9orf3-222ENST00000496567 EDEM2Q9BV94 578 aa21.35■■□□□ 1.01
C9orf3-222ENST00000496567 CAAP1Q9H8G2 361 aa21.35■■□□□ 1.01
C9orf3-222ENST00000496567 DNAAF2Q9NVR5 837 aaKnown RBP21.35■■□□□ 1.01
C9orf3-222ENST00000496567 RAPGEFL1Q9UHV5 662 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms