RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 NLGN4YQ8NFZ3 816 aaPredicted RBP13.98□□□□□ -0.17
VTI1A-209ENST00000496445 RNF31Q96EP0 1072 aa13.98□□□□□ -0.17
VTI1A-209ENST00000496445 FERMT1Q9BQL6 677 aa13.98□□□□□ -0.17
VTI1A-209ENST00000496445 ZPBPQ9BS86 351 aa13.98□□□□□ -0.17
VTI1A-209ENST00000496445 ASB8Q9H765 288 aa13.98□□□□□ -0.17
VTI1A-209ENST00000496445 ARNT2Q9HBZ2 717 aa13.98□□□□□ -0.17
VTI1A-209ENST00000496445 R3HDM2Q9Y2K5 976 aaKnown RBP13.98□□□□□ -0.17
VTI1A-209ENST00000496445 DNMT3AQ9Y6K1 912 aaPredicted RBP13.98□□□□□ -0.17
VTI1A-209ENST00000496445 CAPN6Q9Y6Q1 641 aa13.98□□□□□ -0.17
VTI1A-209ENST00000496445 PIKFYVEQ9Y2I7 2098 aa13.98□□□□□ -0.17
VTI1A-209ENST00000496445 RELNP78509 3460 aa13.98□□□□□ -0.17
VTI1A-209ENST00000496445 SPTA1P02549 2419 aa13.98□□□□□ -0.17
VTI1A-209ENST00000496445 MYO18BQ8IUG5 2567 aa13.97□□□□□ -0.17
VTI1A-209ENST00000496445 TCRBV7S2A1N4TA0A589 114 aa13.97□□□□□ -0.17
VTI1A-209ENST00000496445 C5orf60A6NFR6 353 aa13.97□□□□□ -0.17
VTI1A-209ENST00000496445 CCL22O00626 93 aa13.97□□□□□ -0.17
VTI1A-209ENST00000496445 POLR1CO15160 346 aaPredicted RBP13.97□□□□□ -0.17
VTI1A-209ENST00000496445 LDB2O43679 373 aa13.97□□□□□ -0.17
VTI1A-209ENST00000496445 ZNF28P17035 718 aa13.97□□□□□ -0.17
VTI1A-209ENST00000496445 ITGB6P18564 788 aa13.97□□□□□ -0.17
VTI1A-209ENST00000496445 TMPRSS15P98073 1019 aa13.97□□□□□ -0.17
VTI1A-209ENST00000496445 FOXM1Q08050 763 aa13.97□□□□□ -0.17
VTI1A-209ENST00000496445 LONRF2Q1L5Z9 754 aa13.97□□□□□ -0.17
VTI1A-209ENST00000496445 BCL7AQ4VC05 210 aa13.97□□□□□ -0.17
VTI1A-209ENST00000496445 IRGCQ6NXR0 463 aa13.97□□□□□ -0.17
VTI1A-209ENST00000496445 UNC5BQ8IZJ1 945 aa13.97□□□□□ -0.17
VTI1A-209ENST00000496445 LILRA3Q8N6C8 439 aaPredicted RBP13.97□□□□□ -0.17
VTI1A-209ENST00000496445 FAM71DQ8N9W8 422 aa13.97□□□□□ -0.17
VTI1A-209ENST00000496445 ZNF514Q96K75 400 aaPredicted RBP13.97□□□□□ -0.17
VTI1A-209ENST00000496445 INSM2Q96T92 566 aaPredicted RBP13.97□□□□□ -0.17
VTI1A-209ENST00000496445 RAB33BQ9H082 229 aa13.97□□□□□ -0.17
VTI1A-209ENST00000496445 WWP1Q9H0M0 922 aa13.97□□□□□ -0.17
VTI1A-209ENST00000496445 EPHA6Q9UF33 1036 aa13.97□□□□□ -0.17
VTI1A-209ENST00000496445 CFAP20Q9Y6A4 193 aaKnown RBP13.97□□□□□ -0.17
VTI1A-209ENST00000496445 MGAT4DA6NG13 374 aa13.96□□□□□ -0.17
VTI1A-209ENST00000496445 MIF4GDA9UHW6 222 aaKnown RBP13.96□□□□□ -0.17
VTI1A-209ENST00000496445 RASSF9O75901 435 aa13.96□□□□□ -0.17
VTI1A-209ENST00000496445 ZIC2O95409 532 aaPredicted RBP13.96□□□□□ -0.17
VTI1A-209ENST00000496445 METTL18O95568 372 aa13.96□□□□□ -0.17
VTI1A-209ENST00000496445 CRTAMO95727 393 aa13.96□□□□□ -0.17
VTI1A-209ENST00000496445 MTHFD1P11586 935 aaKnown RBP13.96□□□□□ -0.17
VTI1A-209ENST00000496445 MAP4P27816 1152 aaKnown RBP13.96□□□□□ -0.17
VTI1A-209ENST00000496445 CDC25BP30305 580 aa13.96□□□□□ -0.17
VTI1A-209ENST00000496445 CETN2P41208 172 aa13.96□□□□□ -0.17
VTI1A-209ENST00000496445 CACHD1Q5VU97 1274 aa13.96□□□□□ -0.17
VTI1A-209ENST00000496445 ARHGEF18Q6ZSZ5 1173 aa13.96□□□□□ -0.17
VTI1A-209ENST00000496445 SYCE1Q8N0S2 351 aa13.96□□□□□ -0.17
VTI1A-209ENST00000496445 NXPE1Q8N323 547 aa13.96□□□□□ -0.17
VTI1A-209ENST00000496445 UBL4BQ8N7F7 174 aa13.96□□□□□ -0.17
VTI1A-209ENST00000496445 OR2L2Q8NH16 312 aa13.96□□□□□ -0.17
VTI1A-209ENST00000496445 SLC35B2Q8TB61 432 aa13.96□□□□□ -0.17
VTI1A-209ENST00000496445 KLHL6Q8WZ60 621 aa13.96□□□□□ -0.17
VTI1A-209ENST00000496445 ZDHHC12Q96GR4 267 aa13.96□□□□□ -0.17
VTI1A-209ENST00000496445 HES6Q96HZ4 224 aa13.96□□□□□ -0.17
VTI1A-209ENST00000496445 SLC45A3Q96JT2 553 aa13.96□□□□□ -0.17
VTI1A-209ENST00000496445 DNAJC1Q96KC8 554 aaKnown RBP13.96□□□□□ -0.17
VTI1A-209ENST00000496445 LINC00615Q96LM1 132 aaPredicted RBP13.96□□□□□ -0.17
VTI1A-209ENST00000496445 RMDN2Q96LZ7 410 aa13.96□□□□□ -0.17
VTI1A-209ENST00000496445 PPP1R2P1Q96PQ5 205 aa13.96□□□□□ -0.17
VTI1A-209ENST00000496445 OR6C1Q96RD1 312 aa13.96□□□□□ -0.17
VTI1A-209ENST00000496445 ARHGAP9Q9BRR9 750 aa13.96□□□□□ -0.17
VTI1A-209ENST00000496445 FAM96AQ9H5X1 160 aa13.96□□□□□ -0.17
VTI1A-209ENST00000496445 STARD5Q9NSY2 213 aa13.96□□□□□ -0.17
VTI1A-209ENST00000496445 IMP3Q9NV31 184 aaKnown RBP13.96□□□□□ -0.17
VTI1A-209ENST00000496445 SEMA5BQ9P283 1151 aa13.96□□□□□ -0.17
VTI1A-209ENST00000496445 FAM8A1Q9UBU6 413 aa13.96□□□□□ -0.17
VTI1A-209ENST00000496445 IL17BQ9UHF5 180 aa13.96□□□□□ -0.17
VTI1A-209ENST00000496445 CRLS1Q9UJA2 301 aa13.96□□□□□ -0.17
VTI1A-209ENST00000496445 IGHV5-51A0A0C4DH38 117 aa13.95□□□□□ -0.18
VTI1A-209ENST00000496445 ZNF891A8MT65 544 aaPredicted RBP13.95□□□□□ -0.18
VTI1A-209ENST00000496445 PRSS56P0CW18 603 aa13.95□□□□□ -0.18
VTI1A-209ENST00000496445 MC4RP32245 332 aa13.95□□□□□ -0.18
VTI1A-209ENST00000496445 STAT5AP42229 794 aa13.95□□□□□ -0.18
VTI1A-209ENST00000496445 PRLHRP49683 370 aa13.95□□□□□ -0.18
VTI1A-209ENST00000496445 CDKN1CP49918 316 aaPredicted RBP13.95□□□□□ -0.18
VTI1A-209ENST00000496445 PDE1BQ01064 536 aa13.95□□□□□ -0.18
VTI1A-209ENST00000496445 ABHD18Q0P651 414 aa13.95□□□□□ -0.18
VTI1A-209ENST00000496445 KIF5AQ12840 1032 aa13.95□□□□□ -0.18
VTI1A-209ENST00000496445 NFATC3Q12968 1075 aa13.95□□□□□ -0.18
VTI1A-209ENST00000496445 MAP7Q14244 749 aa13.95□□□□□ -0.18
VTI1A-209ENST00000496445 SNX20Q7Z614 316 aa13.95□□□□□ -0.18
VTI1A-209ENST00000496445 TTC13Q8NBP0 860 aa13.95□□□□□ -0.18
VTI1A-209ENST00000496445 SPC24Q8NBT2 197 aa13.95□□□□□ -0.18
VTI1A-209ENST00000496445 ULK4Q96C45 1275 aa13.95□□□□□ -0.18
VTI1A-209ENST00000496445 SLC41A2Q96JW4 573 aa13.95□□□□□ -0.18
VTI1A-209ENST00000496445 C12orf66Q96MD2 445 aa13.95□□□□□ -0.18
VTI1A-209ENST00000496445 C19orf43Q9BQ61 176 aa13.95□□□□□ -0.18
VTI1A-209ENST00000496445 TMEM121Q9BTD3 319 aa13.95□□□□□ -0.18
VTI1A-209ENST00000496445 ULBP3Q9BZM4 244 aa13.95□□□□□ -0.18
VTI1A-209ENST00000496445 GPN2Q9H9Y4 310 aaPredicted RBP13.95□□□□□ -0.18
VTI1A-209ENST00000496445 IMPACTQ9P2X3 320 aa13.95□□□□□ -0.18
VTI1A-209ENST00000496445 FEZ2Q9UHY8 353 aaPredicted RBP13.95□□□□□ -0.18
VTI1A-209ENST00000496445 IGLV3-16A0A075B6K0 115 aa13.94□□□□□ -0.18
VTI1A-209ENST00000496445 TRBV5-4A0A0C4DH59 114 aa13.94□□□□□ -0.18
VTI1A-209ENST00000496445 GOLGA6L9A6NEM1 432 aa13.94□□□□□ -0.18
VTI1A-209ENST00000496445 OR5K3A6NET4 321 aa13.94□□□□□ -0.18
VTI1A-209ENST00000496445 GOLGA6L3A6NEY3 463 aa13.94□□□□□ -0.18
VTI1A-209ENST00000496445 H7C0S8 307 aa13.94□□□□□ -0.18
VTI1A-209ENST00000496445 NKX2-8O15522 239 aa13.94□□□□□ -0.18
VTI1A-209ENST00000496445 FLNBO75369 2602 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms