RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 NRGNQ92686 78 aa9.38□□□□□ -0.91
SMARCAL1-213ENST00000496037 KREMEN1Q96MU8 473 aa9.38□□□□□ -0.91
SMARCAL1-213ENST00000496037 RAB33BQ9H082 229 aa9.38□□□□□ -0.91
SMARCAL1-213ENST00000496037 GPAMQ9HCL2 828 aa9.38□□□□□ -0.91
SMARCAL1-213ENST00000496037 ACP6Q9NPH0 428 aa9.38□□□□□ -0.91
SMARCAL1-213ENST00000496037 POT1Q9NUX5 634 aa9.38□□□□□ -0.91
SMARCAL1-213ENST00000496037 ZIM2Q9NZV7 527 aa9.38□□□□□ -0.91
SMARCAL1-213ENST00000496037 VPS18Q9P253 973 aa9.38□□□□□ -0.91
SMARCAL1-213ENST00000496037 CD84Q9UIB8 345 aa9.38□□□□□ -0.91
SMARCAL1-213ENST00000496037 PCDHGC4Q9Y5F7 938 aa9.38□□□□□ -0.91
SMARCAL1-213ENST00000496037 PRRC2AP48634 2157 aaKnown RBP9.37□□□□□ -0.91
SMARCAL1-213ENST00000496037 MDC1Q14676 2089 aaKnown RBP9.37□□□□□ -0.91
SMARCAL1-213ENST00000496037 A0A1W2PQ67 120 aa9.37□□□□□ -0.91
SMARCAL1-213ENST00000496037 UBA6A0AVT1 1052 aaPredicted RBP9.37□□□□□ -0.91
SMARCAL1-213ENST00000496037 SLC35F4A4IF30 521 aa9.37□□□□□ -0.91
SMARCAL1-213ENST00000496037 PDZK1P1A8MUH7 402 aa9.37□□□□□ -0.91
SMARCAL1-213ENST00000496037 CPP00450 1065 aa9.37□□□□□ -0.91
SMARCAL1-213ENST00000496037 CAPN1P07384 714 aa9.37□□□□□ -0.91
SMARCAL1-213ENST00000496037 AGXTP21549 392 aa9.37□□□□□ -0.91
SMARCAL1-213ENST00000496037 RORAP35398 523 aa9.37□□□□□ -0.91
SMARCAL1-213ENST00000496037 GMPRP36959 345 aa9.37□□□□□ -0.91
SMARCAL1-213ENST00000496037 FOLR3P41439 243 aa9.37□□□□□ -0.91
SMARCAL1-213ENST00000496037 RGRP47804 291 aa9.37□□□□□ -0.91
SMARCAL1-213ENST00000496037 YBEYP58557 167 aaPredicted RBP9.37□□□□□ -0.91
SMARCAL1-213ENST00000496037 PPP1CAP62136 330 aa9.37□□□□□ -0.91
SMARCAL1-213ENST00000496037 AIMP2Q13155 320 aaKnown RBP9.37□□□□□ -0.91
SMARCAL1-213ENST00000496037 CDSNQ15517 529 aa9.37□□□□□ -0.91
SMARCAL1-213ENST00000496037 GPR19Q15760 415 aa9.37□□□□□ -0.91
SMARCAL1-213ENST00000496037 INAQ16352 499 aa9.37□□□□□ -0.91
SMARCAL1-213ENST00000496037 C11orf91Q3C1V1 193 aa9.37□□□□□ -0.91
SMARCAL1-213ENST00000496037 DNTTIP2Q5QJE6 756 aaKnown RBP9.37□□□□□ -0.91
SMARCAL1-213ENST00000496037 KLHL35Q6PF15 583 aa9.37□□□□□ -0.91
SMARCAL1-213ENST00000496037 IGFL2Q6UWQ7 119 aa9.37□□□□□ -0.91
SMARCAL1-213ENST00000496037 CERS6Q6ZMG9 384 aa9.37□□□□□ -0.91
SMARCAL1-213ENST00000496037 RBM12BQ8IXT5 1001 aaKnown RBP9.37□□□□□ -0.91
SMARCAL1-213ENST00000496037 D2HGDHQ8N465 521 aa9.37□□□□□ -0.91
SMARCAL1-213ENST00000496037 ANKRD20A12PQ8NF67 263 aa9.37□□□□□ -0.91
SMARCAL1-213ENST00000496037 OR6P1Q8NGX9 317 aa9.37□□□□□ -0.91
SMARCAL1-213ENST00000496037 EPS8L3Q8TE67 593 aaKnown RBP9.37□□□□□ -0.91
SMARCAL1-213ENST00000496037 CFAP57Q96MR6 1250 aa9.37□□□□□ -0.91
SMARCAL1-213ENST00000496037 ZNF396Q96N95 335 aaPredicted RBP9.37□□□□□ -0.91
SMARCAL1-213ENST00000496037 TSG101Q99816 390 aa9.37□□□□□ -0.91
SMARCAL1-213ENST00000496037 SMR3AQ99954 134 aa9.37□□□□□ -0.91
SMARCAL1-213ENST00000496037 C17orf62Q9BQA9 187 aa9.37□□□□□ -0.91
SMARCAL1-213ENST00000496037 ZNF559Q9BR84 538 aa9.37□□□□□ -0.91
SMARCAL1-213ENST00000496037 CINPQ9BW66 212 aaPredicted RBP9.37□□□□□ -0.91
SMARCAL1-213ENST00000496037 NOL6Q9H6R4 1146 aaKnown RBP9.37□□□□□ -0.91
SMARCAL1-213ENST00000496037 RMI1Q9H9A7 625 aa9.37□□□□□ -0.91
SMARCAL1-213ENST00000496037 SCHIP1Q9P0W5 487 aaPredicted RBP9.37□□□□□ -0.91
SMARCAL1-213ENST00000496037 SEMA5BQ9P283 1151 aa9.37□□□□□ -0.91
SMARCAL1-213ENST00000496037 SEC14L3Q9UDX4 400 aa9.37□□□□□ -0.91
SMARCAL1-213ENST00000496037 NEU3Q9UQ49 428 aa9.37□□□□□ -0.91
SMARCAL1-213ENST00000496037 PCYT1BQ9Y5K3 369 aaPredicted RBP9.37□□□□□ -0.91
SMARCAL1-213ENST00000496037 PIKFYVEQ9Y2I7 2098 aa9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 TLCD2A6NGC4 264 aa9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 FOXO6A8MYZ6 492 aa9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 FAM72CH0Y354 149 aa9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 TRAFD1O14545 582 aaPredicted RBP9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 PMM2O15305 246 aa9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 SLC19A2O60779 497 aa9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 PALMO75781 387 aa9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 MTA2O94776 668 aa9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 ATP1A1P05023 1023 aaKnown RBP9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 SYT1P21579 422 aa9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 LHCGRP22888 699 aa9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 EPHB2P29323 1055 aa9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 FLT3P36888 993 aa9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 USP8P40818 1118 aa9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 ME1P48163 572 aa9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 AP1S1P61966 158 aa9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 ATP11AP98196 1134 aa9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 FKBP3Q00688 224 aaKnown RBP9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 GPR18Q14330 331 aa9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 PLCL1Q15111 1095 aa9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 SEPT7Q16181 437 aaKnown RBP9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 PTCHD3Q3KNS1 767 aa9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 FAM72AQ5TYM5 149 aa9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 PRAMEF17Q5VTA0 474 aa9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 RESP18Q5W5W9 173 aa9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 NXNQ6DKJ4 435 aa9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 FAM72DQ6L9T8 149 aa9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 FAM72BQ86X60 149 aa9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 AOPEPQ8N6M6 819 aa9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 ACBD4Q8NC06 268 aa9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 MYRIPQ8NFW9 859 aa9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 EXD1Q8NHP7 514 aa9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 ZNF669Q96BR6 464 aaPredicted RBP9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 ZNF501Q96CX3 271 aaPredicted RBP9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 CXorf40BQ96DE9 158 aa9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 COX14Q96I36 57 aa9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 C18orf12Q96KH6 178 aa9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 CD180Q99467 661 aa9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 MAP3K3Q99759 626 aa9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 DPH2Q9BQC3 489 aaPredicted RBP9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 TMEM121Q9BTD3 319 aa9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 NDC1Q9BTX1 674 aa9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 ACTR5Q9H9F9 607 aaPredicted RBP9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 PCMTD2Q9NV79 361 aa9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 SOHLH2Q9NX45 425 aa9.36□□□□□ -0.91
SMARCAL1-213ENST00000496037 GPN3Q9UHW5 284 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms