RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 PPARGP37231 505 aaPredicted RBP12.13□□□□□ -0.47
MRPL55-233ENST00000495899 SLC19A1P41440 591 aa12.13□□□□□ -0.47
MRPL55-233ENST00000495899 NSG1P42857 185 aa12.13□□□□□ -0.47
MRPL55-233ENST00000495899 CDKN1CP49918 316 aaPredicted RBP12.13□□□□□ -0.47
MRPL55-233ENST00000495899 SESN2P58004 480 aaPredicted RBP12.13□□□□□ -0.47
MRPL55-233ENST00000495899 ERVPABLB-1P60509 514 aa12.13□□□□□ -0.47
MRPL55-233ENST00000495899 GABREP78334 506 aa12.13□□□□□ -0.47
MRPL55-233ENST00000495899 PRAMEP78395 509 aa12.13□□□□□ -0.47
MRPL55-233ENST00000495899 TRA2AQ13595 282 aaKnown RBP eCLIP12.13□□□□□ -0.47
MRPL55-233ENST00000495899 MAP9Q49MG5 647 aa12.13□□□□□ -0.47
MRPL55-233ENST00000495899 MSS51Q4VC12 460 aa12.13□□□□□ -0.47
MRPL55-233ENST00000495899 WDR74Q6RFH5 385 aaPredicted RBP12.13□□□□□ -0.47
MRPL55-233ENST00000495899 PACS1Q6VY07 963 aa12.13□□□□□ -0.47
MRPL55-233ENST00000495899 USP53Q70EK8 1073 aa12.13□□□□□ -0.47
MRPL55-233ENST00000495899 DET1Q7L5Y6 550 aa12.13□□□□□ -0.47
MRPL55-233ENST00000495899 B3GNT8Q7Z7M8 397 aa12.13□□□□□ -0.47
MRPL55-233ENST00000495899 CREG2Q8IUH2 290 aa12.13□□□□□ -0.47
MRPL55-233ENST00000495899 SLITRK4Q8IW52 837 aa12.13□□□□□ -0.47
MRPL55-233ENST00000495899 TRIM48Q8IWZ4 208 aa12.13□□□□□ -0.47
MRPL55-233ENST00000495899 OR4L1Q8NH43 312 aa12.13□□□□□ -0.47
MRPL55-233ENST00000495899 ZFPM2Q8WW38 1151 aa12.13□□□□□ -0.47
MRPL55-233ENST00000495899 AHCYL2Q96HN2 611 aaKnown RBP12.13□□□□□ -0.47
MRPL55-233ENST00000495899 ZNF778Q96MU6 729 aa12.13□□□□□ -0.47
MRPL55-233ENST00000495899 ZNF578Q96N58 590 aaPredicted RBP12.13□□□□□ -0.47
MRPL55-233ENST00000495899 SLC46A1Q96NT5 459 aa12.13□□□□□ -0.47
MRPL55-233ENST00000495899 CCM2Q9BSQ5 444 aa12.13□□□□□ -0.47
MRPL55-233ENST00000495899 KIFC1Q9BW19 673 aa12.13□□□□□ -0.47
MRPL55-233ENST00000495899 MRM3Q9HC36 420 aaKnown RBP12.13□□□□□ -0.47
MRPL55-233ENST00000495899 TREX1Q9NSU2 369 aa12.13□□□□□ -0.47
MRPL55-233ENST00000495899 SCHIP1Q9P0W5 487 aaPredicted RBP12.13□□□□□ -0.47
MRPL55-233ENST00000495899 PCYOX1Q9UHG3 505 aa12.13□□□□□ -0.47
MRPL55-233ENST00000495899 ATXN7L1Q9ULK2 861 aaPredicted RBP12.13□□□□□ -0.47
MRPL55-233ENST00000495899 SATB2Q9UPW6 733 aa12.13□□□□□ -0.47
MRPL55-233ENST00000495899 PLXNB3Q9ULL4 1909 aa12.13□□□□□ -0.47
MRPL55-233ENST00000495899 GOLGA4Q13439 2230 aaKnown RBP12.13□□□□□ -0.47
MRPL55-233ENST00000495899 SCN8AQ9UQD0 1980 aa12.12□□□□□ -0.47
MRPL55-233ENST00000495899 DMXL2Q8TDJ6 3036 aa12.12□□□□□ -0.47
MRPL55-233ENST00000495899 CCDC78A2IDD5 438 aa12.12□□□□□ -0.47
MRPL55-233ENST00000495899 SRRM3A6NNA2 597 aaPredicted RBP12.12□□□□□ -0.47
MRPL55-233ENST00000495899 F8W8V4 182 aa12.12□□□□□ -0.47
MRPL55-233ENST00000495899 PLD2O14939 933 aa12.12□□□□□ -0.47
MRPL55-233ENST00000495899 HGSO14964 777 aaPredicted RBP12.12□□□□□ -0.47
MRPL55-233ENST00000495899 DUX1O43812 170 aa12.12□□□□□ -0.47
MRPL55-233ENST00000495899 BRINP1O60477 761 aa12.12□□□□□ -0.47
MRPL55-233ENST00000495899 GOT2P00505 430 aaKnown RBP12.12□□□□□ -0.47
MRPL55-233ENST00000495899 RBMS1P29558 406 aaKnown RBP12.12□□□□□ -0.47
MRPL55-233ENST00000495899 FOXN2P32314 431 aa12.12□□□□□ -0.47
MRPL55-233ENST00000495899 PAFAH1B1P43034 410 aa12.12□□□□□ -0.47
MRPL55-233ENST00000495899 VPS41P49754 854 aa12.12□□□□□ -0.47
MRPL55-233ENST00000495899 LIMK2P53671 638 aa12.12□□□□□ -0.47
MRPL55-233ENST00000495899 DRG2P55039 364 aaKnown RBP12.12□□□□□ -0.47
MRPL55-233ENST00000495899 NFE2L1Q14494 772 aa12.12□□□□□ -0.47
MRPL55-233ENST00000495899 CLCA4Q14CN2 919 aa12.12□□□□□ -0.47
MRPL55-233ENST00000495899 SEPT7Q16181 437 aaKnown RBP12.12□□□□□ -0.47
MRPL55-233ENST00000495899 DBN1Q16643 649 aa12.12□□□□□ -0.47
MRPL55-233ENST00000495899 TBC1D25Q3MII6 688 aa12.12□□□□□ -0.47
MRPL55-233ENST00000495899 AARS2Q5JTZ9 985 aaKnown RBP12.12□□□□□ -0.47
MRPL55-233ENST00000495899 TMEM71Q6P5X7 295 aa12.12□□□□□ -0.47
MRPL55-233ENST00000495899 ZNF574Q6ZN55 896 aaPredicted RBP12.12□□□□□ -0.47
MRPL55-233ENST00000495899 FAM83HQ6ZRV2 1179 aaPredicted RBP12.12□□□□□ -0.47
MRPL55-233ENST00000495899 TMEM26Q6ZUK4 368 aa12.12□□□□□ -0.47
MRPL55-233ENST00000495899 SYDE1Q6ZW31 735 aaPredicted RBP12.12□□□□□ -0.47
MRPL55-233ENST00000495899 ZNF534Q76KX8 674 aa12.12□□□□□ -0.47
MRPL55-233ENST00000495899 RAB11FIP2Q7L804 512 aa12.12□□□□□ -0.47
MRPL55-233ENST00000495899 CFAP206Q8IYR0 622 aa12.12□□□□□ -0.47
MRPL55-233ENST00000495899 OR6P1Q8NGX9 317 aa12.12□□□□□ -0.47
MRPL55-233ENST00000495899 CPT1BQ92523 772 aa12.12□□□□□ -0.47
MRPL55-233ENST00000495899 FGF11Q92914 225 aa12.12□□□□□ -0.47
MRPL55-233ENST00000495899 CXorf40BQ96DE9 158 aa12.12□□□□□ -0.47
MRPL55-233ENST00000495899 RUNDC3BQ96NL0 473 aa12.12□□□□□ -0.47
MRPL55-233ENST00000495899 CMKLR1Q99788 373 aa12.12□□□□□ -0.47
MRPL55-233ENST00000495899 FOXP3Q9BZS1 431 aa12.12□□□□□ -0.47
MRPL55-233ENST00000495899 RDH14Q9HBH5 336 aa12.12□□□□□ -0.47
MRPL55-233ENST00000495899 EPB41L5Q9HCM4 733 aa12.12□□□□□ -0.47
MRPL55-233ENST00000495899 XAB2Q9HCS7 855 aaKnown RBP12.12□□□□□ -0.47
MRPL55-233ENST00000495899 AKAP7Q9P0M2 348 aaPredicted RBP12.12□□□□□ -0.47
MRPL55-233ENST00000495899 PDP2Q9P2J9 529 aa12.12□□□□□ -0.47
MRPL55-233ENST00000495899 SLC2A6Q9UGQ3 507 aa12.12□□□□□ -0.47
MRPL55-233ENST00000495899 ANAPC5Q9UJX4 755 aa12.12□□□□□ -0.47
MRPL55-233ENST00000495899 WDR37Q9Y2I8 494 aa12.12□□□□□ -0.47
MRPL55-233ENST00000495899 ASPMQ8IZT6 3477 aa12.12□□□□□ -0.47
MRPL55-233ENST00000495899 EPG5Q9HCE0 2579 aa12.11□□□□□ -0.47
MRPL55-233ENST00000495899 IGHV5-10-1A0A0J9YXX1 117 aa12.11□□□□□ -0.47
MRPL55-233ENST00000495899 A0A1W2PNU3 283 aaPredicted RBP12.11□□□□□ -0.47
MRPL55-233ENST00000495899 TCRBV7S3A2A0A539 114 aa12.11□□□□□ -0.47
MRPL55-233ENST00000495899 OR51F1A6NGY5 319 aa12.11□□□□□ -0.47
MRPL55-233ENST00000495899 SDR42E2A6NKP2 422 aa12.11□□□□□ -0.47
MRPL55-233ENST00000495899 OR52A4PA6NMU1 304 aa12.11□□□□□ -0.47
MRPL55-233ENST00000495899 MGAT1P26572 445 aa12.11□□□□□ -0.47
MRPL55-233ENST00000495899 CFHR1Q03591 330 aa12.11□□□□□ -0.47
MRPL55-233ENST00000495899 RPA4Q13156 261 aa12.11□□□□□ -0.47
MRPL55-233ENST00000495899 PPP1R7Q15435 360 aa12.11□□□□□ -0.47
MRPL55-233ENST00000495899 RPE65Q16518 533 aa12.11□□□□□ -0.47
MRPL55-233ENST00000495899 FASTKD1Q53R41 847 aaKnown RBP12.11□□□□□ -0.47
MRPL55-233ENST00000495899 C3orf38Q5JPI3 329 aa12.11□□□□□ -0.47
MRPL55-233ENST00000495899 NKAIN2Q5VXU1 208 aa12.11□□□□□ -0.47
MRPL55-233ENST00000495899 CAPRIN2Q6IMN6 1127 aaKnown RBP12.11□□□□□ -0.47
MRPL55-233ENST00000495899 ZNF449Q6P9G9 518 aa12.11□□□□□ -0.47
MRPL55-233ENST00000495899 TMPRSS9Q7Z410 1059 aa12.11□□□□□ -0.47
MRPL55-233ENST00000495899 PPIL6Q8IXY8 311 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms