RNA–Protein interactions for RNA: ENST00000495588.2

GAPVD1-218, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5

Gene GAPVD1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-218ENST00000495588 PSMC3P17980 439 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 RBL1P28749 1068 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 GDI1P31150 447 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 CHRNA3P32297 505 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 CSKP41240 450 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 GARSP41250 739 aaKnown RBP5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 ATP5OP48047 213 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 FNTAP49354 379 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 PAPOLAP51003 745 aaKnown RBP5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 NEK3P51956 506 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 NDST2P52849 883 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 GNA12Q03113 381 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 COL10A1Q03692 680 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 PPIDQ08752 370 aaKnown RBP5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 LMAN2Q12907 356 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 ZNF177Q13360 481 aaPredicted RBP5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 XRCC4Q13426 336 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 CDH18Q13634 790 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 BYSLQ13895 437 aaKnown RBP5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 PDK1Q15118 436 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 SLC45A4Q5BKX6 768 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 TEX35Q5T0J7 233 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 MPP7Q5T2T1 576 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 LAIR1Q6GTX8 287 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 DRICH1Q6PGQ1 229 aaPredicted RBP5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 MTSS1LQ765P7 747 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 BZW1Q7L1Q6 419 aaKnown RBP5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 DOK3Q7L591 496 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 SETD3Q86TU7 594 aaPredicted RBP5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 TMPRSS6Q8IU80 811 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 CDKL3Q8IVW4 592 aaPredicted RBP5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 YAF2Q8IY57 180 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 CCDC105Q8IYK2 499 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 UMODL1-AS1Q8N2C9 162 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 MMGT1Q8N4V1 131 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 ATPAF2Q8N5M1 289 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 ALLCQ8N6M5 410 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 GLIS1Q8NBF1 620 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 IL17RDQ8NFM7 739 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 MAFAQ8NHW3 353 aaPredicted RBP5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 TFB1MQ8WVM0 346 aaKnown RBP5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 ARHGEF2Q92974 986 aaKnown RBP5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 ATP2A3Q93084 1043 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 HDAC11Q96DB2 347 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 APIPQ96GX9 242 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 RPGRIP1Q96KN7 1286 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 CCDC114Q96M63 670 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 QKIQ96PU8 341 aaKnown RBP eCLIP5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 TRIM51Q9BSJ1 452 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 TMEM121Q9BTD3 319 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 LRRC1Q9BTT6 524 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 TRMT61BQ9BVS5 477 aaKnown RBP5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 PHF7Q9BWX1 381 aaPredicted RBP5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 FRMD8P1Q9BZ68 369 aaPredicted RBP5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 EPC1Q9H2F5 836 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 NELFAQ9H3P2 528 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 RETREG1Q9H6L5 497 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 ECT2Q9H8V3 914 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 ZMAT3Q9HA38 289 aaKnown RBP5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 HOMER3Q9NSC5 361 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 GTSE1Q9NYZ3 720 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 PCYOX1Q9UHG3 505 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 SLC23A1Q9UHI7 598 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 AMACRQ9UHK6 382 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 PHTF1Q9UMS5 762 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 FAM50BQ9Y247 325 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 ACTL7AQ9Y615 435 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 RAD54BQ9Y620 910 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 V9GYY5 206 aaPredicted RBP5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 SHROOM3Q8TF72 1996 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 BRWD1Q9NSI6 2320 aa5.56□□□□□ -1.52
GAPVD1-218ENST00000495588 KIAA1549LQ6ZVL6 1849 aa5.55□□□□□ -1.52
GAPVD1-218ENST00000495588 COL4A2P08572 1712 aa5.55□□□□□ -1.52
GAPVD1-218ENST00000495588 MIA3Q5JRA6 1907 aa5.55□□□□□ -1.52
GAPVD1-218ENST00000495588 TICRRQ7Z2Z1 1910 aa5.55□□□□□ -1.52
GAPVD1-218ENST00000495588 ILVBLA1L0T0 632 aa5.55□□□□□ -1.52
GAPVD1-218ENST00000495588 BCLAF3A2AJT9 711 aaKnown RBP5.55□□□□□ -1.52
GAPVD1-218ENST00000495588 ARHGAP42A6NI28 874 aa5.55□□□□□ -1.52
GAPVD1-218ENST00000495588 EFCAB8A8MWE9 144 aa5.55□□□□□ -1.52
GAPVD1-218ENST00000495588 B5MCH6 92 aa5.55□□□□□ -1.52
GAPVD1-218ENST00000495588 J3KR12 359 aa5.55□□□□□ -1.52
GAPVD1-218ENST00000495588 SGK1O00141 431 aa5.55□□□□□ -1.52
GAPVD1-218ENST00000495588 KCNK1O00180 336 aa5.55□□□□□ -1.52
GAPVD1-218ENST00000495588 F2RL2O00254 374 aa5.55□□□□□ -1.52
GAPVD1-218ENST00000495588 TRIM24O15164 1050 aa5.55□□□□□ -1.52
GAPVD1-218ENST00000495588 CHADO15335 359 aa5.55□□□□□ -1.52
GAPVD1-218ENST00000495588 NCAM2O15394 837 aa5.55□□□□□ -1.52
GAPVD1-218ENST00000495588 KCNN4O15554 427 aa5.55□□□□□ -1.52
GAPVD1-218ENST00000495588 HOXC11O43248 304 aaPredicted RBP5.55□□□□□ -1.52
GAPVD1-218ENST00000495588 HOXA3O43365 443 aaPredicted RBP5.55□□□□□ -1.52
GAPVD1-218ENST00000495588 CACNG3O60359 315 aa5.55□□□□□ -1.52
GAPVD1-218ENST00000495588 SNAP91O60641 907 aa5.55□□□□□ -1.52
GAPVD1-218ENST00000495588 NFATC1O95644 943 aa5.55□□□□□ -1.52
GAPVD1-218ENST00000495588 IFNB1P01574 187 aa5.55□□□□□ -1.52
GAPVD1-218ENST00000495588 ZSCAN5DPP0CG00 497 aa5.55□□□□□ -1.52
GAPVD1-218ENST00000495588 CCNCP24863 283 aa5.55□□□□□ -1.52
GAPVD1-218ENST00000495588 PTPN3P26045 913 aa5.55□□□□□ -1.52
GAPVD1-218ENST00000495588 HLA-FP30511 346 aa5.55□□□□□ -1.52
GAPVD1-218ENST00000495588 CD70P32970 193 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms