RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 RTP4Q96DX8 246 aa15.28■□□□□ 0.04
LIMS2-216ENST00000494613 DNAJC1Q96KC8 554 aaKnown RBP15.28■□□□□ 0.04
LIMS2-216ENST00000494613 LINC00615Q96LM1 132 aaPredicted RBP15.28■□□□□ 0.04
LIMS2-216ENST00000494613 ETNK1Q9HBU6 452 aa15.28■□□□□ 0.04
LIMS2-216ENST00000494613 APMAPQ9HDC9 416 aa15.28■□□□□ 0.04
LIMS2-216ENST00000494613 NLE1Q9NVX2 485 aaPredicted RBP15.28■□□□□ 0.04
LIMS2-216ENST00000494613 PIH1D1Q9NWS0 290 aaKnown RBP15.28■□□□□ 0.04
LIMS2-216ENST00000494613 EPHA6Q9UF33 1036 aa15.28■□□□□ 0.04
LIMS2-216ENST00000494613 ZNF148Q9UQR1 794 aa15.28■□□□□ 0.04
LIMS2-216ENST00000494613 CFAP20Q9Y6A4 193 aaKnown RBP15.28■□□□□ 0.04
LIMS2-216ENST00000494613 AHCTF1Q8WYP5 2266 aa15.28■□□□□ 0.04
LIMS2-216ENST00000494613 MN1Q10571 1320 aaPredicted RBP15.27■□□□□ 0.04
LIMS2-216ENST00000494613 KLHL33A6NCF5 533 aa15.27■□□□□ 0.04
LIMS2-216ENST00000494613 H7C0S8 307 aa15.27■□□□□ 0.04
LIMS2-216ENST00000494613 POLR1CO15160 346 aaPredicted RBP15.27■□□□□ 0.04
LIMS2-216ENST00000494613 TOX3O15405 576 aaPredicted RBP15.27■□□□□ 0.04
LIMS2-216ENST00000494613 KIF1CO43896 1103 aaKnown RBP15.27■□□□□ 0.04
LIMS2-216ENST00000494613 ANKRD34CP0C6C1 535 aa15.27■□□□□ 0.04
LIMS2-216ENST00000494613 RALBP11234 206 aa15.27■□□□□ 0.04
LIMS2-216ENST00000494613 ITGALP20701 1170 aa15.27■□□□□ 0.04
LIMS2-216ENST00000494613 MC4RP32245 332 aa15.27■□□□□ 0.04
LIMS2-216ENST00000494613 SEPHS1P49903 392 aa15.27■□□□□ 0.04
LIMS2-216ENST00000494613 C19orf57Q0VDD7 668 aa15.27■□□□□ 0.04
LIMS2-216ENST00000494613 SNX1Q13596 522 aa15.27■□□□□ 0.04
LIMS2-216ENST00000494613 POU6F1Q14863 301 aa15.27■□□□□ 0.04
LIMS2-216ENST00000494613 BCL7AQ4VC05 210 aa15.27■□□□□ 0.04
LIMS2-216ENST00000494613 ZRANB3Q5FWF4 1079 aa15.27■□□□□ 0.04
LIMS2-216ENST00000494613 XKR5Q6UX68 686 aa15.27■□□□□ 0.04
LIMS2-216ENST00000494613 CEACAM20Q6UY09 585 aa15.27■□□□□ 0.04
LIMS2-216ENST00000494613 ZNF662Q6ZS27 426 aa15.27■□□□□ 0.04
LIMS2-216ENST00000494613 TAS2R42Q7RTR8 314 aa15.27■□□□□ 0.04
LIMS2-216ENST00000494613 LINC00523Q86TU6 105 aa15.27■□□□□ 0.04
LIMS2-216ENST00000494613 SPDYE1Q8NFV5 336 aaPredicted RBP15.27■□□□□ 0.04
LIMS2-216ENST00000494613 STYXQ8WUJ0 223 aa15.27■□□□□ 0.04
LIMS2-216ENST00000494613 HEXDCQ8WVB3 486 aa15.27■□□□□ 0.04
LIMS2-216ENST00000494613 RSC1A1Q92681 617 aa15.27■□□□□ 0.04
LIMS2-216ENST00000494613 ZDHHC12Q96GR4 267 aa15.27■□□□□ 0.04
LIMS2-216ENST00000494613 TEFMQ96QE5 360 aaKnown RBP15.27■□□□□ 0.04
LIMS2-216ENST00000494613 COPS8Q99627 209 aa15.27■□□□□ 0.04
LIMS2-216ENST00000494613 ZPBPQ9BS86 351 aa15.27■□□□□ 0.04
LIMS2-216ENST00000494613 FRMD8P1Q9BZ68 369 aaPredicted RBP15.27■□□□□ 0.04
LIMS2-216ENST00000494613 RAB33BQ9H082 229 aa15.27■□□□□ 0.04
LIMS2-216ENST00000494613 WWP1Q9H0M0 922 aa15.27■□□□□ 0.04
LIMS2-216ENST00000494613 LZTFL1Q9NQ48 299 aa15.27■□□□□ 0.04
LIMS2-216ENST00000494613 ZDHHC3Q9NYG2 299 aa15.27■□□□□ 0.04
LIMS2-216ENST00000494613 PILRAQ9UKJ1 303 aa15.27■□□□□ 0.04
LIMS2-216ENST00000494613 TRBV5-4A0A0C4DH59 114 aa15.26■□□□□ 0.03
LIMS2-216ENST00000494613 MROH6A6NGR9 719 aa15.26■□□□□ 0.03
LIMS2-216ENST00000494613 C1QL1O75973 258 aa15.26■□□□□ 0.03
LIMS2-216ENST00000494613 IFNB1P01574 187 aa15.26■□□□□ 0.03
LIMS2-216ENST00000494613 PRSS56P0CW18 603 aa15.26■□□□□ 0.03
LIMS2-216ENST00000494613 ETS1P14921 441 aa15.26■□□□□ 0.03
LIMS2-216ENST00000494613 PSMA3P25788 255 aa15.26■□□□□ 0.03
LIMS2-216ENST00000494613 ATP1A2P50993 1020 aa15.26■□□□□ 0.03
LIMS2-216ENST00000494613 LY6DQ14210 128 aa15.26■□□□□ 0.03
LIMS2-216ENST00000494613 SKIDA1Q1XH10 827 aa15.26■□□□□ 0.03
LIMS2-216ENST00000494613 CACHD1Q5VU97 1274 aa15.26■□□□□ 0.03
LIMS2-216ENST00000494613 CAPRIN2Q6IMN6 1127 aaKnown RBP15.26■□□□□ 0.03
LIMS2-216ENST00000494613 TIPARPQ7Z3E1 657 aaKnown RBP15.26■□□□□ 0.03
LIMS2-216ENST00000494613 PRUNE1Q86TP1 453 aa15.26■□□□□ 0.03
LIMS2-216ENST00000494613 SERPINA9Q86WD7 417 aa15.26■□□□□ 0.03
LIMS2-216ENST00000494613 CACNA2D3Q8IZS8 1091 aa15.26■□□□□ 0.03
LIMS2-216ENST00000494613 LILRA3Q8N6C8 439 aaPredicted RBP15.26■□□□□ 0.03
LIMS2-216ENST00000494613 IL22RA1Q8N6P7 574 aa15.26■□□□□ 0.03
LIMS2-216ENST00000494613 ZSCAN1Q8NBB4 408 aa15.26■□□□□ 0.03
LIMS2-216ENST00000494613 OR52K1Q8NGK4 314 aa15.26■□□□□ 0.03
LIMS2-216ENST00000494613 GPR150Q8NGU9 434 aa15.26■□□□□ 0.03
LIMS2-216ENST00000494613 ZFPM2Q8WW38 1151 aa15.26■□□□□ 0.03
LIMS2-216ENST00000494613 KLHL6Q8WZ60 621 aa15.26■□□□□ 0.03
LIMS2-216ENST00000494613 ALS2CR12Q96Q35 445 aa15.26■□□□□ 0.03
LIMS2-216ENST00000494613 FAM8A1Q9UBU6 413 aa15.26■□□□□ 0.03
LIMS2-216ENST00000494613 IGLV3-16A0A075B6K0 115 aa15.25■□□□□ 0.03
LIMS2-216ENST00000494613 C17orf113A0A1B0GUU1 675 aa15.25■□□□□ 0.03
LIMS2-216ENST00000494613 CFAP99D6REC4 459 aa15.25■□□□□ 0.03
LIMS2-216ENST00000494613 RASSF9O75901 435 aa15.25■□□□□ 0.03
LIMS2-216ENST00000494613 MTHFD1P11586 935 aaKnown RBP15.25■□□□□ 0.03
LIMS2-216ENST00000494613 FDFT1P37268 417 aa15.25■□□□□ 0.03
LIMS2-216ENST00000494613 SH3BP2P78314 561 aa15.25■□□□□ 0.03
LIMS2-216ENST00000494613 CYP4F2P78329 520 aa15.25■□□□□ 0.03
LIMS2-216ENST00000494613 FOXM1Q08050 763 aa15.25■□□□□ 0.03
LIMS2-216ENST00000494613 SEPT6Q14141 434 aa15.25■□□□□ 0.03
LIMS2-216ENST00000494613 GSE1Q14687 1217 aa15.25■□□□□ 0.03
LIMS2-216ENST00000494613 CCNG2Q16589 344 aa15.25■□□□□ 0.03
LIMS2-216ENST00000494613 LINC00303Q3SY05 128 aa15.25■□□□□ 0.03
LIMS2-216ENST00000494613 CCDC38Q502W7 563 aa15.25■□□□□ 0.03
LIMS2-216ENST00000494613 IRGCQ6NXR0 463 aa15.25■□□□□ 0.03
LIMS2-216ENST00000494613 FAM92BQ6ZTR7 304 aa15.25■□□□□ 0.03
LIMS2-216ENST00000494613 PIANPQ8IYJ0 282 aa15.25■□□□□ 0.03
LIMS2-216ENST00000494613 DNAAF3Q8N9W5 541 aa15.25■□□□□ 0.03
LIMS2-216ENST00000494613 C12orf66Q96MD2 445 aa15.25■□□□□ 0.03
LIMS2-216ENST00000494613 CCM2Q9BSQ5 444 aa15.25■□□□□ 0.03
LIMS2-216ENST00000494613 ZNF768Q9H5H4 540 aaKnown RBP15.25■□□□□ 0.03
LIMS2-216ENST00000494613 IMP3Q9NV31 184 aaKnown RBP15.25■□□□□ 0.03
LIMS2-216ENST00000494613 SIDT1Q9NXL6 827 aaKnown RBP15.25■□□□□ 0.03
LIMS2-216ENST00000494613 DRG1Q9Y295 367 aaKnown RBP15.25■□□□□ 0.03
LIMS2-216ENST00000494613 PCDHGA4Q9Y5G9 962 aa15.25■□□□□ 0.03
LIMS2-216ENST00000494613 ATRXP46100 2492 aa15.25■□□□□ 0.03
LIMS2-216ENST00000494613 ATMQ13315 3056 aa15.25■□□□□ 0.03
LIMS2-216ENST00000494613 SDK2Q58EX2 2172 aa15.24■□□□□ 0.03
LIMS2-216ENST00000494613 CCDC78A2IDD5 438 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms