RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 RGS4P49798 205 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 NCALDP61601 193 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 SH3BP2P78314 561 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 IRX1P78414 480 aaPredicted RBP6.68□□□□□ -1.34
MSH5-217ENST00000494458 FOXK1P85037 733 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 TMEM115Q12893 351 aaPredicted RBP6.68□□□□□ -1.34
MSH5-217ENST00000494458 CDC16Q13042 620 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 TBCCQ15814 346 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 ZXDCQ2QGD7 858 aaPredicted RBP6.68□□□□□ -1.34
MSH5-217ENST00000494458 ZNF284Q2VY69 593 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 MAP7D1Q3KQU3 841 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 LEXMQ3ZCV2 418 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 FBXO43Q4G163 708 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 TMEM259Q4ZIN3 620 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 LRRC73Q5JTD7 316 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 NEK5Q6P3R8 708 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 FBXL19Q6PCT2 694 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 USP30Q70CQ3 517 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 TRMT11Q7Z4G4 463 aaKnown RBP6.68□□□□□ -1.34
MSH5-217ENST00000494458 C11orf96Q7Z7L8 435 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 GPSM1Q86YR5 675 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 CLYBLQ8N0X4 340 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 PELI3Q8N2H9 469 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 PTGR2Q8N8N7 351 aaPredicted RBP6.68□□□□□ -1.34
MSH5-217ENST00000494458 RASGEF1AQ8N9B8 481 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 PPP1R14CQ8TAE6 165 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 CSGALNACT1Q8TDX6 532 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 ACTRT2Q8TDY3 377 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 WNT2BQ93097 391 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 AP2M1Q96CW1 435 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 LINGO1Q96FE5 620 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 UNKQ9C0B0 810 aaKnown RBP6.68□□□□□ -1.34
MSH5-217ENST00000494458 NMUR2Q9GZQ4 415 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 MKRN2Q9H000 416 aaKnown RBP6.68□□□□□ -1.34
MSH5-217ENST00000494458 UBE2ZQ9H832 354 aaPredicted RBP6.68□□□□□ -1.34
MSH5-217ENST00000494458 MEAF6Q9HAF1 191 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 EML4Q9HC35 981 aaKnown RBP6.68□□□□□ -1.34
MSH5-217ENST00000494458 ZBTB26Q9HCK0 441 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 TRIM39Q9HCM9 518 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 ARHGEF3Q9NR81 526 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 NUDT4Q9NZJ9 180 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 PCTPQ9UKL6 214 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 ITM2BQ9Y287 266 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 RRP15Q9Y3B9 282 aaKnown RBP6.68□□□□□ -1.34
MSH5-217ENST00000494458 TNPO3Q9Y5L0 923 aaKnown RBP6.68□□□□□ -1.34
MSH5-217ENST00000494458 DNMT3AQ9Y6K1 912 aaPredicted RBP6.68□□□□□ -1.34
MSH5-217ENST00000494458 BRWD1Q9NSI6 2320 aa6.68□□□□□ -1.34
MSH5-217ENST00000494458 C5orf42Q9H799 3197 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 XIRP2A4UGR9 3374 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 F5P12259 2224 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 SERTM1A2A2V5 107 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 KLHL33A6NCF5 533 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 LOC730098B7Z3J9 87 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 GPR89AB7ZAQ6 455 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 CFAP99D6REC4 459 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 E5RI56 91 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 H3BQ06 376 aaPredicted RBP6.67□□□□□ -1.34
MSH5-217ENST00000494458 BTN3A1O00481 513 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 SDHDO14521 159 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 FCHO1O14526 889 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 MID1O15344 667 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 FFAR2O15552 330 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 PLRG1O43660 514 aaKnown RBP6.67□□□□□ -1.34
MSH5-217ENST00000494458 VEGFDO43915 354 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 PSIP1O75475 530 aaKnown RBP6.67□□□□□ -1.34
MSH5-217ENST00000494458 HSPA4LO95757 839 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 IGLV3-19P01714 112 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 C8GP07360 202 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 GPR89BP0CG08 455 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 PRR35P0CG20 571 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 XPAP23025 273 aaPredicted RBP6.67□□□□□ -1.34
MSH5-217ENST00000494458 MPSTP25325 297 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 PRDX6P30041 224 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 MAPK9P45984 424 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 CTSCP53634 463 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 PLOD1Q02809 727 aaPredicted RBP6.67□□□□□ -1.34
MSH5-217ENST00000494458 CLCQ05315 142 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 LCP2Q13094 533 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 SP140Q13342 867 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 E2F2Q14209 437 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 FGL2Q14314 439 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 ACOX1Q15067 660 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 PFKFB4Q16877 469 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 TTLL9Q3SXZ7 439 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 GLIPR1L2Q4G1C9 344 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 SLC9B1Q4ZJI4 515 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 KANK2Q63ZY3 851 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 SEL1L3Q68CR1 1132 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 ANKS6Q68DC2 871 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 ZNF776Q68DI1 518 aaPredicted RBP6.67□□□□□ -1.34
MSH5-217ENST00000494458 SULT1C3Q6IMI6 304 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 KIAA1211LQ6NV74 962 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 PNCKQ6P2M8 343 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 LARP4Q71RC2 724 aaKnown RBP eCLIP6.67□□□□□ -1.34
MSH5-217ENST00000494458 ADGRG6Q86SQ4 1221 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 CUZD1Q86UP6 607 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 ALYREFQ86V81 257 aaKnown RBP6.67□□□□□ -1.34
MSH5-217ENST00000494458 TREML1Q86YW5 311 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 PHYKPLQ8IUZ5 450 aa6.67□□□□□ -1.34
MSH5-217ENST00000494458 ZNF547Q8IVP9 402 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms