RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 GPD2P43304 727 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 CCR10P46092 362 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 GSTM5P46439 218 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 NRIP1P48552 1158 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 PITPNBP48739 271 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 DHPSP49366 369 aaPredicted RBP2.22□□□□□ -2.05
PTPN12-212ENST00000494248 PEX5P50542 639 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 RBM5P52756 815 aaKnown RBP eCLIP2.22□□□□□ -2.05
PTPN12-212ENST00000494248 MRPL12P52815 198 aaKnown RBP2.22□□□□□ -2.05
PTPN12-212ENST00000494248 CDH8P55286 799 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 RBM6P78332 1123 aaKnown RBP2.22□□□□□ -2.05
PTPN12-212ENST00000494248 ASIC1P78348 528 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 SARNPP82979 210 aaKnown RBP2.22□□□□□ -2.05
PTPN12-212ENST00000494248 ELP6Q0PNE2 266 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 GAB1Q13480 694 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 ALCAMQ13740 583 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 THOC5Q13769 683 aaKnown RBP2.22□□□□□ -2.05
PTPN12-212ENST00000494248 SNTB1Q13884 538 aaKnown RBP2.22□□□□□ -2.05
PTPN12-212ENST00000494248 DPYSQ14117 519 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 GIT2Q14161 759 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 DOC2AQ14183 400 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 SQLEQ14534 574 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 EFTUD2Q15029 972 aaKnown RBP eCLIP2.22□□□□□ -2.057e-6■■■■■ 30.5
PTPN12-212ENST00000494248 RPS6KA1Q15418 735 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 MED22Q15528 200 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 HADHQ16836 314 aaKnown RBP2.22□□□□□ -2.05
PTPN12-212ENST00000494248 SLC5A9Q2M3M2 681 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 HYAL4Q2M3T9 481 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 SPATA46Q5T0L3 261 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 MRNIPQ6NTE8 343 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 ACSM6Q6P461 480 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 PAPD4Q6PIY7 484 aaKnown RBP2.22□□□□□ -2.05
PTPN12-212ENST00000494248 METAP1DQ6UB28 335 aaPredicted RBP2.22□□□□□ -2.05
PTPN12-212ENST00000494248 TMEM270Q6UE05 265 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 ISLR2Q6UXK2 745 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 SLC36A4Q6YBV0 504 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 SLC16A12Q6ZSM3 486 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 CHST9Q7L1S5 443 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 SYT13Q7L8C5 426 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 TAS2R42Q7RTR8 314 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 DGLUCYQ7Z3D6 616 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 HOOK3Q86VS8 718 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 DDIASQ8IXT1 998 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 SCYL3Q8IZE3 742 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 BBS5Q8N3I7 341 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 TRIML2Q8N7C3 387 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 PRR26Q8N8Z3 221 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 FAM133AQ8N9E0 248 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 SRFBP1Q8NEF9 429 aaKnown RBP2.22□□□□□ -2.05
PTPN12-212ENST00000494248 OR52M1Q8NGK5 317 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 METTL21AQ8WXB1 218 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 IP6K1Q92551 441 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 MRPS27Q92552 414 aaKnown RBP2.22□□□□□ -2.05
PTPN12-212ENST00000494248 THRSPQ92748 146 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 INPP5DQ92835 1189 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 ZKSCAN4Q969J2 545 aaPredicted RBP2.22□□□□□ -2.05
PTPN12-212ENST00000494248 EME1Q96AY2 570 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 LRRC45Q96CN5 670 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 SAAL1Q96ER3 474 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 PIWIL1Q96J94 861 aaKnown RBP2.22□□□□□ -2.05
PTPN12-212ENST00000494248 ADAD1Q96M93 576 aaKnown RBP2.22□□□□□ -2.05
PTPN12-212ENST00000494248 TCEANC2Q96MN5 208 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 CMTM3Q96MX0 182 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 INPP4AQ96PE3 977 aaPredicted RBP2.22□□□□□ -2.05
PTPN12-212ENST00000494248 NUDCD1Q96RS6 583 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 DDX50Q9BQ39 737 aaKnown RBP2.22□□□□□ -2.05
PTPN12-212ENST00000494248 FERMT1Q9BQL6 677 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 CCDC77Q9BR77 488 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 SYT17Q9BSW7 474 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 THUMPD2Q9BTF0 503 aaKnown RBP2.22□□□□□ -2.05
PTPN12-212ENST00000494248 PHF7Q9BWX1 381 aaPredicted RBP2.22□□□□□ -2.05
PTPN12-212ENST00000494248 TRIM31Q9BZY9 425 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 CCSER1Q9C0I3 900 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 NACA2Q9H009 215 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 THAP2Q9H0W7 228 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 CARD9Q9H257 536 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 STN1Q9H668 368 aaKnown RBP2.22□□□□□ -2.05
PTPN12-212ENST00000494248 DENND2DQ9H6A0 471 aaPredicted RBP2.22□□□□□ -2.05
PTPN12-212ENST00000494248 SH2D4AQ9H788 454 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 C8orf33Q9H7E9 229 aaPredicted RBP2.22□□□□□ -2.05
PTPN12-212ENST00000494248 LRRC40Q9H9A6 602 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 SCPEP1Q9HB40 452 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 IL21RQ9HBE5 538 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 ZBTB26Q9HCK0 441 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 RPRD1BQ9NQG5 326 aaKnown RBP2.22□□□□□ -2.05
PTPN12-212ENST00000494248 FAM114A2Q9NRY5 505 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 CENPMQ9NSP4 180 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 TMOD3Q9NYL9 352 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 UBAP1Q9NZ09 502 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 IL1RAPL1Q9NZN1 696 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 KCND2Q9NZV8 630 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 MALT1Q9UDY8 824 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 STK39Q9UEW8 545 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 ITGA11Q9UKX5 1188 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 SARDHQ9UL12 918 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 ZMYND8Q9ULU4 1186 aaPredicted RBP2.22□□□□□ -2.05
PTPN12-212ENST00000494248 PPIEQ9UNP9 301 aaKnown RBP2.22□□□□□ -2.05
PTPN12-212ENST00000494248 TNFSF13BQ9Y275 285 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 NFS1Q9Y697 457 aa2.22□□□□□ -2.05
PTPN12-212ENST00000494248 A0A0B4J293 547 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms