RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 THOP1P52888 689 aa10.48□□□□□ -0.73
CLCN6-208ENST00000494028 METAP1P53582 386 aa10.48□□□□□ -0.73
CLCN6-208ENST00000494028 ERVPABLB-1P60509 514 aa10.48□□□□□ -0.73
CLCN6-208ENST00000494028 STX1BP61266 288 aa10.48□□□□□ -0.73
CLCN6-208ENST00000494028 POLR2LP62875 67 aaKnown RBP10.48□□□□□ -0.73
CLCN6-208ENST00000494028 GRB7Q14451 532 aa10.48□□□□□ -0.73
CLCN6-208ENST00000494028 EIF4HQ15056 248 aaKnown RBP10.48□□□□□ -0.73
CLCN6-208ENST00000494028 PDGFRLQ15198 375 aa10.48□□□□□ -0.73
CLCN6-208ENST00000494028 POM121L1PQ3SYA9 428 aa10.48□□□□□ -0.73
CLCN6-208ENST00000494028 TCHHL1Q5QJ38 904 aaPredicted RBP10.48□□□□□ -0.73
CLCN6-208ENST00000494028 PPP2R2DQ66LE6 453 aa10.48□□□□□ -0.73
CLCN6-208ENST00000494028 NAIF1Q69YI7 327 aaPredicted RBP10.48□□□□□ -0.73
CLCN6-208ENST00000494028 LETMD1Q6P1Q0 360 aa10.48□□□□□ -0.73
CLCN6-208ENST00000494028 SFTPA1Q8IWL2 248 aa10.48□□□□□ -0.73
CLCN6-208ENST00000494028 DDIASQ8IXT1 998 aa10.48□□□□□ -0.73
CLCN6-208ENST00000494028 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.48□□□□□ -0.73
CLCN6-208ENST00000494028 DSELQ8IZU8 1212 aa10.48□□□□□ -0.73
CLCN6-208ENST00000494028 TRAM1L1Q8N609 369 aa10.48□□□□□ -0.73
CLCN6-208ENST00000494028 KYQ8NBH2 561 aa10.48□□□□□ -0.73
CLCN6-208ENST00000494028 OR52B6Q8NGF0 335 aa10.48□□□□□ -0.73
CLCN6-208ENST00000494028 OR9I1Q8NGQ6 314 aa10.48□□□□□ -0.73
CLCN6-208ENST00000494028 OR2T11Q8NH01 316 aa10.48□□□□□ -0.73
CLCN6-208ENST00000494028 DTX3LQ8TDB6 740 aa10.48□□□□□ -0.73
CLCN6-208ENST00000494028 JADE3Q92613 823 aa10.48□□□□□ -0.73
CLCN6-208ENST00000494028 DLG3Q92796 817 aa10.48□□□□□ -0.73
CLCN6-208ENST00000494028 SCAMP4Q969E2 229 aa10.48□□□□□ -0.73
CLCN6-208ENST00000494028 ARRDC3Q96B67 414 aa10.48□□□□□ -0.73
CLCN6-208ENST00000494028 CCDC124Q96CT7 223 aaKnown RBP10.48□□□□□ -0.73
CLCN6-208ENST00000494028 CDCA3Q99618 268 aaPredicted RBP10.48□□□□□ -0.73
CLCN6-208ENST00000494028 NPAS2Q99743 824 aa10.48□□□□□ -0.73
CLCN6-208ENST00000494028 HGH1Q9BTY7 390 aa10.48□□□□□ -0.73
CLCN6-208ENST00000494028 APOL5Q9BWW9 433 aa10.48□□□□□ -0.73
CLCN6-208ENST00000494028 SPATA16Q9BXB7 569 aa10.48□□□□□ -0.73
CLCN6-208ENST00000494028 AKTIPQ9H8T0 292 aa10.48□□□□□ -0.73
CLCN6-208ENST00000494028 WDR41Q9HAD4 459 aa10.48□□□□□ -0.73
CLCN6-208ENST00000494028 RDH14Q9HBH5 336 aa10.48□□□□□ -0.73
CLCN6-208ENST00000494028 NDE1Q9NXR1 346 aa10.48□□□□□ -0.73
CLCN6-208ENST00000494028 CACNA2D2Q9NY47 1150 aa10.48□□□□□ -0.73
CLCN6-208ENST00000494028 WWOXQ9NZC7 414 aa10.48□□□□□ -0.73
CLCN6-208ENST00000494028 SUN2Q9UH99 717 aa10.48□□□□□ -0.73
CLCN6-208ENST00000494028 MBD1Q9UIS9 605 aaPredicted RBP10.48□□□□□ -0.73
CLCN6-208ENST00000494028 PTBP2Q9UKA9 531 aaKnown RBP10.48□□□□□ -0.73
CLCN6-208ENST00000494028 TIMM22Q9Y584 194 aa10.48□□□□□ -0.73
CLCN6-208ENST00000494028 C16orf96A6NNT2 1141 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 FBP2O00757 339 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 NUAK1O60285 661 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 MTX2O75431 263 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 CRCPO75575 148 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 OR56A5P0C7T3 313 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 MPC1LP0DKB6 136 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 UROSP10746 265 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 HLA-EP13747 358 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 VCLP18206 1134 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 LBPP18428 481 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 NFKBIAP25963 317 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 ITGB7P26010 798 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 AOAHP28039 575 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 ETV3P41162 512 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 SLC6A11P48066 632 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 HSPA7P48741 367 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 ACADVLP49748 655 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 CCNG1P51959 295 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 ST8SIA6P61647 398 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 GTF2H2Q13888 395 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 FNDC3BQ53EP0 1204 aaKnown RBP10.47□□□□□ -0.73
CLCN6-208ENST00000494028 AGKQ53H12 422 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 PIGGQ5H8A4 983 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 GTF2H2CQ6P1K8 395 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 VITQ6UXI7 678 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 MBOAT1Q6ZNC8 495 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 Q6ZVL8 140 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 DET1Q7L5Y6 550 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 TECPR1Q7Z6L1 1165 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 GPR149Q86SP6 731 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 HPS6Q86YV9 775 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 RASGRP3Q8IV61 690 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 FBXW8Q8N3Y1 598 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 EFCAB3Q8N7B9 438 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 DCBLD1Q8N8Z6 715 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 TERB1Q8NA31 727 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 HCAR2Q8TDS4 363 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 RHBDF1Q96CC6 855 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 TUBGCP3Q96CW5 907 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 SLC45A3Q96JT2 553 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 FAM83CQ9BQN1 747 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 FAM83DQ9H4H8 585 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 NSUN3Q9H649 340 aaKnown RBP10.47□□□□□ -0.73
CLCN6-208ENST00000494028 RAD18Q9NS91 495 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 AIG1Q9NVV5 245 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 STX18Q9P2W9 335 aaKnown RBP10.47□□□□□ -0.73
CLCN6-208ENST00000494028 SARDHQ9UL12 918 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 POMPQ9Y244 141 aa10.47□□□□□ -0.73
CLCN6-208ENST00000494028 TNPO3Q9Y5L0 923 aaKnown RBP10.47□□□□□ -0.73
CLCN6-208ENST00000494028 RANBP2P49792 3224 aaKnown RBP10.46□□□□□ -0.73
CLCN6-208ENST00000494028 EDDM13A0A1B0GTR0 161 aa10.46□□□□□ -0.73
CLCN6-208ENST00000494028 BBIP1A8MTZ0 92 aa10.46□□□□□ -0.73
CLCN6-208ENST00000494028 PSMD11O00231 422 aa10.46□□□□□ -0.73
CLCN6-208ENST00000494028 NR5A2O00482 541 aa10.46□□□□□ -0.73
CLCN6-208ENST00000494028 MRASO14807 208 aa10.46□□□□□ -0.73
CLCN6-208ENST00000494028 LINC01565O15544 149 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms