RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 MYBL1P10243 752 aa3.82□□□□□ -1.8
CLK1-213ENST00000492793 FGF3P11487 239 aaPredicted RBP3.82□□□□□ -1.8
CLK1-213ENST00000492793 HLA-DOBP13765 273 aa3.82□□□□□ -1.8
CLK1-213ENST00000492793 FMO5P49326 533 aa3.82□□□□□ -1.8
CLK1-213ENST00000492793 MLLT10P55197 1068 aa3.82□□□□□ -1.8
CLK1-213ENST00000492793 COASYQ13057 564 aa3.82□□□□□ -1.8
CLK1-213ENST00000492793 SNTB1Q13884 538 aaKnown RBP3.82□□□□□ -1.8
CLK1-213ENST00000492793 KEAP1Q14145 624 aa3.82□□□□□ -1.8
CLK1-213ENST00000492793 MELKQ14680 651 aa3.82□□□□□ -1.8
CLK1-213ENST00000492793 GCNT6Q5T4J0 391 aa3.82□□□□□ -1.8
CLK1-213ENST00000492793 STXBP5Q5T5C0 1151 aa3.82□□□□□ -1.8
CLK1-213ENST00000492793 ERMARDQ5T6L9 678 aa3.82□□□□□ -1.8
CLK1-213ENST00000492793 NDUFAF5Q5TEU4 345 aa3.82□□□□□ -1.8
CLK1-213ENST00000492793 TEX38Q6PEX7 206 aa3.82□□□□□ -1.8
CLK1-213ENST00000492793 KCTD8Q6ZWB6 473 aa3.82□□□□□ -1.8
CLK1-213ENST00000492793 TUBA1AQ71U36 451 aa3.82□□□□□ -1.8
CLK1-213ENST00000492793 KRT74Q7RTS7 529 aa3.82□□□□□ -1.8
CLK1-213ENST00000492793 ATG9AQ7Z3C6 839 aa3.82□□□□□ -1.8
CLK1-213ENST00000492793 CAMKMTQ7Z624 323 aa3.82□□□□□ -1.8
CLK1-213ENST00000492793 CEP57Q86XR8 500 aa3.82□□□□□ -1.8
CLK1-213ENST00000492793 MAB21L3Q8N8X9 362 aa3.82□□□□□ -1.8
CLK1-213ENST00000492793 OR6J1Q8NGC5 347 aa3.82□□□□□ -1.8
CLK1-213ENST00000492793 LMO3Q8TAP4 145 aa3.82□□□□□ -1.8
CLK1-213ENST00000492793 NXNL1Q96CM4 212 aa3.82□□□□□ -1.8
CLK1-213ENST00000492793 ZNF582Q96NG8 517 aaPredicted RBP3.82□□□□□ -1.8
CLK1-213ENST00000492793 SERINC2Q96SA4 455 aa3.82□□□□□ -1.8
CLK1-213ENST00000492793 TUBA1CQ9BQE3 449 aa3.82□□□□□ -1.8
CLK1-213ENST00000492793 AP1M1Q9BXS5 423 aa3.82□□□□□ -1.8
CLK1-213ENST00000492793 PPIL3Q9H2H8 161 aaKnown RBP3.82□□□□□ -1.8
CLK1-213ENST00000492793 OPA3Q9H6K4 179 aa3.82□□□□□ -1.8
CLK1-213ENST00000492793 TBC1D17Q9HA65 648 aa3.82□□□□□ -1.8
CLK1-213ENST00000492793 CD93Q9NPY3 652 aa3.82□□□□□ -1.8
CLK1-213ENST00000492793 CCDC177Q9NQR7 707 aaPredicted RBP3.82□□□□□ -1.8
CLK1-213ENST00000492793 PTTG2Q9NZH5 202 aa3.82□□□□□ -1.8
CLK1-213ENST00000492793 STK26Q9P289 416 aa3.82□□□□□ -1.8
CLK1-213ENST00000492793 FAF1Q9UNN5 650 aaPredicted RBP3.82□□□□□ -1.8
CLK1-213ENST00000492793 ZNF711Q9Y462 761 aa3.82□□□□□ -1.8
CLK1-213ENST00000492793 CGNL1Q0VF96 1302 aa3.81□□□□□ -1.8
CLK1-213ENST00000492793 A0A0B4J293 547 aa3.81□□□□□ -1.8
CLK1-213ENST00000492793 ZCWPW2A0A1B0GU75 182 aa3.81□□□□□ -1.8
CLK1-213ENST00000492793 TRBC2A0A5B9 178 aa3.81□□□□□ -1.8
CLK1-213ENST00000492793 PRAC2D3DTV9 90 aa3.81□□□□□ -1.8
CLK1-213ENST00000492793 MEIS2O14770 477 aa3.81□□□□□ -1.8
CLK1-213ENST00000492793 XRCC3O43542 346 aa3.81□□□□□ -1.8
CLK1-213ENST00000492793 TSPAN1O60635 241 aa3.81□□□□□ -1.8
CLK1-213ENST00000492793 TADA2AO75478 443 aa3.81□□□□□ -1.8
CLK1-213ENST00000492793 CSPG5O95196 566 aa3.81□□□□□ -1.8
CLK1-213ENST00000492793 LIPFP07098 398 aa3.81□□□□□ -1.8
CLK1-213ENST00000492793 PFKFB1P16118 471 aa3.81□□□□□ -1.8
CLK1-213ENST00000492793 CPT2P23786 658 aa3.81□□□□□ -1.8
CLK1-213ENST00000492793 EEF1DP29692 281 aaKnown RBP3.81□□□□□ -1.8
CLK1-213ENST00000492793 AHRP35869 848 aa3.81□□□□□ -1.8
CLK1-213ENST00000492793 FUT6P51993 359 aa3.81□□□□□ -1.8
CLK1-213ENST00000492793 ZNF132P52740 706 aa3.81□□□□□ -1.8
CLK1-213ENST00000492793 KRTAP1-1Q07627 177 aa3.81□□□□□ -1.8
CLK1-213ENST00000492793 IL11RAQ14626 422 aa3.81□□□□□ -1.8
CLK1-213ENST00000492793 PDSS1Q5T2R2 415 aa3.81□□□□□ -1.8
CLK1-213ENST00000492793 CAPRIN2Q6IMN6 1127 aaKnown RBP3.81□□□□□ -1.8
CLK1-213ENST00000492793 KRT80Q6KB66 452 aa3.81□□□□□ -1.8
CLK1-213ENST00000492793 KIAA1161Q6NSJ0 714 aa3.81□□□□□ -1.8
CLK1-213ENST00000492793 SPSB3Q6PJ21 355 aa3.81□□□□□ -1.8
CLK1-213ENST00000492793 FIGLAQ6QHK4 219 aa3.81□□□□□ -1.8
CLK1-213ENST00000492793 ZNF517Q6ZMY9 492 aaPredicted RBP3.81□□□□□ -1.8
CLK1-213ENST00000492793 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.81□□□□□ -1.8
CLK1-213ENST00000492793 PLPPR4Q7Z2D5 763 aa3.81□□□□□ -1.8
CLK1-213ENST00000492793 EXOC3L1Q86VI1 746 aa3.81□□□□□ -1.8
CLK1-213ENST00000492793 LONP2Q86WA8 852 aa3.81□□□□□ -1.8
CLK1-213ENST00000492793 FAM114A1Q8IWE2 563 aa3.81□□□□□ -1.8
CLK1-213ENST00000492793 MUC20Q8N307 709 aaPredicted RBP3.81□□□□□ -1.8
CLK1-213ENST00000492793 TTC30BQ8N4P2 665 aa3.81□□□□□ -1.8
CLK1-213ENST00000492793 RBMXL3Q8N7X1 1067 aaKnown RBP3.81□□□□□ -1.8
CLK1-213ENST00000492793 POC1AQ8NBT0 407 aa3.81□□□□□ -1.8
CLK1-213ENST00000492793 TSPAN14Q8NG11 270 aa3.81□□□□□ -1.8
CLK1-213ENST00000492793 CD101Q93033 1021 aa3.81□□□□□ -1.8
CLK1-213ENST00000492793 SPACA9Q96E40 222 aaPredicted RBP3.81□□□□□ -1.8
CLK1-213ENST00000492793 PGAP3Q96FM1 320 aaPredicted RBP3.81□□□□□ -1.8
CLK1-213ENST00000492793 FAM84BQ96KN1 310 aaPredicted RBP3.81□□□□□ -1.8
CLK1-213ENST00000492793 BAG1Q99933 345 aaPredicted RBP3.81□□□□□ -1.8
CLK1-213ENST00000492793 MOV10L1Q9BXT6 1211 aaKnown RBP3.81□□□□□ -1.8
CLK1-213ENST00000492793 UPF2Q9HAU5 1272 aaKnown RBP3.81□□□□□ -1.8
CLK1-213ENST00000492793 HHATLQ9HCP6 504 aa3.81□□□□□ -1.8
CLK1-213ENST00000492793 ABCF3Q9NUQ8 709 aa3.81□□□□□ -1.8
CLK1-213ENST00000492793 HAO2Q9NYQ3 351 aa3.81□□□□□ -1.8
CLK1-213ENST00000492793 DDX25Q9UHL0 483 aaKnown RBP3.81□□□□□ -1.8
CLK1-213ENST00000492793 SLC24A2Q9UI40 661 aa3.81□□□□□ -1.8
CLK1-213ENST00000492793 ZHX1Q9UKY1 873 aaPredicted RBP3.81□□□□□ -1.8
CLK1-213ENST00000492793 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.81□□□□□ -1.82e-27■■■■■ 27.1
CLK1-213ENST00000492793 PRSS51A0A1B0GVH4 220 aa3.8□□□□□ -1.8
CLK1-213ENST00000492793 ASPDHA6ND91 283 aa3.8□□□□□ -1.8
CLK1-213ENST00000492793 C16orf97H3BN30 126 aa3.8□□□□□ -1.8
CLK1-213ENST00000492793 DKC1O60832 514 aaKnown RBP eCLIP3.8□□□□□ -1.8
CLK1-213ENST00000492793 EIF5BO60841 1220 aaKnown RBP3.8□□□□□ -1.8
CLK1-213ENST00000492793 TFAP2AP05549 437 aa3.8□□□□□ -1.8
CLK1-213ENST00000492793 SNRNP70P08621 437 aaKnown RBP3.8□□□□□ -1.8
CLK1-213ENST00000492793 CETPP11597 493 aa3.8□□□□□ -1.8
CLK1-213ENST00000492793 CKMT2P17540 419 aa3.8□□□□□ -1.8
CLK1-213ENST00000492793 CCKARP32238 428 aa3.8□□□□□ -1.8
CLK1-213ENST00000492793 MC5RP33032 325 aa3.8□□□□□ -1.8
CLK1-213ENST00000492793 CCR3P51677 355 aa3.8□□□□□ -1.8
CLK1-213ENST00000492793 CSE1LP55060 971 aaKnown RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms